RNA–Protein interactions for RNA: ENST00000389641.8

CCDC57-202, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC57, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-202ENST00000389641 HS3ST6Q96QI5 342 aa11.52□□□□□ -0.57
CCDC57-202ENST00000389641 IMMP2LQ96T52 175 aa11.52□□□□□ -0.57
CCDC57-202ENST00000389641 TUBG2Q9NRH3 451 aa11.52□□□□□ -0.57
CCDC57-202ENST00000389641 PSENENQ9NZ42 101 aa11.52□□□□□ -0.57
CCDC57-202ENST00000389641 TCRBV21S2A2A0A5A6 115 aa11.51□□□□□ -0.57
CCDC57-202ENST00000389641 M0QZK8 103 aa11.51□□□□□ -0.57
CCDC57-202ENST00000389641 GGCTO75223 188 aaKnown RBP11.51□□□□□ -0.57
CCDC57-202ENST00000389641 NRASP01111 189 aa11.51□□□□□ -0.57
CCDC57-202ENST00000389641 CRYAAP02489 173 aa11.51□□□□□ -0.57
CCDC57-202ENST00000389641 PSG2P11465 335 aa11.51□□□□□ -0.57
CCDC57-202ENST00000389641 ZNF16P17020 682 aaPredicted RBP11.51□□□□□ -0.57
CCDC57-202ENST00000389641 RAB7AP51149 207 aa11.51□□□□□ -0.57
CCDC57-202ENST00000389641 HIST1H3AP68431 136 aa11.51□□□□□ -0.57
CCDC57-202ENST00000389641 MMDQ15546 238 aa11.51□□□□□ -0.57
CCDC57-202ENST00000389641 PLPPR5Q32ZL2 321 aa11.51□□□□□ -0.57
CCDC57-202ENST00000389641 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.51□□□□□ -0.57
CCDC57-202ENST00000389641 ZNF525Q8N782 197 aa11.51□□□□□ -0.57
CCDC57-202ENST00000389641 OR10G3Q8NGC4 313 aa11.51□□□□□ -0.57
CCDC57-202ENST00000389641 OR1L3Q8NH93 324 aa11.51□□□□□ -0.57
CCDC57-202ENST00000389641 CACNG5Q9UF02 275 aa11.51□□□□□ -0.57
CCDC57-202ENST00000389641 ZNF816-ZNF321PA0A0X1KG74 233 aa11.51□□□□□ -0.57
CCDC57-202ENST00000389641 TNFRSF4P43489 277 aa11.51□□□□□ -0.57
CCDC57-202ENST00000389641 COTL1Q14019 142 aa11.51□□□□□ -0.57
CCDC57-202ENST00000389641 RNF151Q2KHN1 245 aa11.51□□□□□ -0.57
CCDC57-202ENST00000389641 Q6ZWC4 215 aa11.51□□□□□ -0.57
CCDC57-202ENST00000389641 EXTL1Q92935 676 aa11.51□□□□□ -0.57
CCDC57-202ENST00000389641 METTL7AQ9H8H3 244 aa11.51□□□□□ -0.57
CCDC57-202ENST00000389641 IL36RNQ9UBH0 155 aa11.51□□□□□ -0.57
CCDC57-202ENST00000389641 PAGE4O60829 102 aa11.5□□□□□ -0.57
CCDC57-202ENST00000389641 UCP1P25874 307 aa11.5□□□□□ -0.57
CCDC57-202ENST00000389641 CHRNB4P30926 498 aa11.5□□□□□ -0.57
CCDC57-202ENST00000389641 PSMB3P49720 205 aa11.5□□□□□ -0.57
CCDC57-202ENST00000389641 SHBQ15464 509 aa11.5□□□□□ -0.57
CCDC57-202ENST00000389641 PRAMEF20Q5VT98 475 aa11.5□□□□□ -0.57
CCDC57-202ENST00000389641 TMPRSS7Q7RTY8 843 aa11.5□□□□□ -0.57
CCDC57-202ENST00000389641 MIEN1Q9BRT3 115 aa11.5□□□□□ -0.57
CCDC57-202ENST00000389641 FAM103A1Q9BTL3 118 aaKnown RBP11.5□□□□□ -0.57
CCDC57-202ENST00000389641 TLX3O43711 291 aaPredicted RBP11.5□□□□□ -0.57
CCDC57-202ENST00000389641 PGLYRP1O75594 196 aaPredicted RBP11.5□□□□□ -0.57
CCDC57-202ENST00000389641 IGHV4-34P06331 123 aa11.5□□□□□ -0.57
CCDC57-202ENST00000389641 SERPINE2P07093 398 aa11.5□□□□□ -0.57
CCDC57-202ENST00000389641 IL6RP08887 468 aaPredicted RBP11.5□□□□□ -0.57
CCDC57-202ENST00000389641 ZNF468Q5VIY5 522 aaPredicted RBP11.5□□□□□ -0.57
CCDC57-202ENST00000389641 CISD2Q8N5K1 135 aaKnown RBP11.5□□□□□ -0.57
CCDC57-202ENST00000389641 CMTM2Q8TAZ6 248 aa11.5□□□□□ -0.57
CCDC57-202ENST00000389641 UBALD1Q8TB05 177 aa11.5□□□□□ -0.57
CCDC57-202ENST00000389641 LMX1AQ8TE12 382 aa11.5□□□□□ -0.57
CCDC57-202ENST00000389641 SPSB1Q96BD6 273 aa11.5□□□□□ -0.57
CCDC57-202ENST00000389641 UCN2Q96RP3 112 aa11.5□□□□□ -0.57
CCDC57-202ENST00000389641 HSPB9Q9BQS6 159 aa11.5□□□□□ -0.57
CCDC57-202ENST00000389641 MYF5P13349 255 aa11.49□□□□□ -0.57
CCDC57-202ENST00000389641 MSX1P28360 303 aa11.49□□□□□ -0.57
CCDC57-202ENST00000389641 DEFB133Q30KQ1 61 aa11.49□□□□□ -0.57
CCDC57-202ENST00000389641 PLCXD3Q63HM9 321 aa11.49□□□□□ -0.57
CCDC57-202ENST00000389641 ABCA7Q8IZY2 2146 aa11.49□□□□□ -0.57
CCDC57-202ENST00000389641 SPTSSAQ969W0 71 aa11.49□□□□□ -0.57
CCDC57-202ENST00000389641 VAMP8Q9BV40 100 aa11.49□□□□□ -0.57
CCDC57-202ENST00000389641 CTSSP25774 331 aa11.49□□□□□ -0.57
CCDC57-202ENST00000389641 UBE2G2P60604 165 aa11.49□□□□□ -0.57
CCDC57-202ENST00000389641 HIST3H3Q16695 136 aa11.49□□□□□ -0.57
CCDC57-202ENST00000389641 HIPK2Q9H2X6 1198 aa11.49□□□□□ -0.57
CCDC57-202ENST00000389641 TMEM106BQ9NUM4 274 aa11.49□□□□□ -0.57
CCDC57-202ENST00000389641 ADMP35318 185 aa11.49□□□□□ -0.57
CCDC57-202ENST00000389641 RBM11P57052 281 aaKnown RBP11.49□□□□□ -0.57
CCDC57-202ENST00000389641 DAZAP2Q15038 168 aaPredicted RBP11.49□□□□□ -0.57
CCDC57-202ENST00000389641 CNN3Q15417 329 aaKnown RBP11.49□□□□□ -0.57
CCDC57-202ENST00000389641 KCNMB1Q16558 191 aa11.49□□□□□ -0.57
CCDC57-202ENST00000389641 HLA-BQ31612 363 aa11.49□□□□□ -0.57
CCDC57-202ENST00000389641 RLN3Q8WXF3 142 aa11.49□□□□□ -0.57
CCDC57-202ENST00000389641 DERL1Q9BUN8 251 aa11.49□□□□□ -0.57
CCDC57-202ENST00000389641 GPR35Q9HC97 309 aa11.49□□□□□ -0.57
CCDC57-202ENST00000389641 FER1L5A0AVI2 2057 aa11.48□□□□□ -0.57
CCDC57-202ENST00000389641 TRAV39A0A0B4J263 110 aa11.48□□□□□ -0.57
CCDC57-202ENST00000389641 IGKV1-6A0A0C4DH72 117 aa11.48□□□□□ -0.57
CCDC57-202ENST00000389641 TRBV11-1A0A0K0K1C0 115 aa11.48□□□□□ -0.57
CCDC57-202ENST00000389641 SYNGR2O43760 224 aa11.48□□□□□ -0.57
CCDC57-202ENST00000389641 C1QTNF9P0C862 333 aa11.48□□□□□ -0.57
CCDC57-202ENST00000389641 LRRC75BQ2VPJ9 315 aa11.48□□□□□ -0.57
CCDC57-202ENST00000389641 TMEM211Q6ICI0 200 aa11.48□□□□□ -0.57
CCDC57-202ENST00000389641 ACSM6Q6P461 480 aa11.48□□□□□ -0.57
CCDC57-202ENST00000389641 ZNF709Q8N972 641 aa11.48□□□□□ -0.57
CCDC57-202ENST00000389641 CPEB3Q8NE35 698 aaKnown RBP11.48□□□□□ -0.57
CCDC57-202ENST00000389641 IL1F10Q8WWZ1 152 aa11.48□□□□□ -0.57
CCDC57-202ENST00000389641 KIAA1324LA8MWY0 1029 aaPredicted RBP11.48□□□□□ -0.57
CCDC57-202ENST00000389641 NPPCP23582 126 aa11.48□□□□□ -0.57
CCDC57-202ENST00000389641 KCNIP4Q6PIL6 250 aa11.48□□□□□ -0.57
CCDC57-202ENST00000389641 ZNF611Q8N823 705 aa11.48□□□□□ -0.57
CCDC57-202ENST00000389641 NABP1Q96AH0 204 aa11.48□□□□□ -0.57
CCDC57-202ENST00000389641 MRGPRX4Q96LA9 322 aa11.48□□□□□ -0.57
CCDC57-202ENST00000389641 WDR61Q9GZS3 305 aaKnown RBP11.48□□□□□ -0.57
CCDC57-202ENST00000389641 OBP2AQ9NY56 170 aa11.48□□□□□ -0.57
CCDC57-202ENST00000389641 PTRH2Q9Y3E5 179 aaKnown RBP11.48□□□□□ -0.57
CCDC57-202ENST00000389641 CLEC18AA5D8T8 446 aa11.47□□□□□ -0.57
CCDC57-202ENST00000389641 F2Z2F3 143 aa11.47□□□□□ -0.57
CCDC57-202ENST00000389641 UMODP07911 640 aa11.47□□□□□ -0.57
CCDC57-202ENST00000389641 CD38P28907 300 aa11.47□□□□□ -0.57
CCDC57-202ENST00000389641 MPLP40238 635 aa11.47□□□□□ -0.57
CCDC57-202ENST00000389641 PTTG1IPP53801 180 aa11.47□□□□□ -0.57
CCDC57-202ENST00000389641 RPL15P61313 204 aaKnown RBP11.47□□□□□ -0.57
CCDC57-202ENST00000389641 TPTE2P1Q5T6R2 138 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms