RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 TBC1D26Q86UD7 250 aa12.58□□□□□ -0.4
VPS9D1-201ENST00000389386 C20orf196Q8IYI0 205 aa12.58□□□□□ -0.4
VPS9D1-201ENST00000389386 WDYHV1Q96HA8 205 aa12.58□□□□□ -0.4
VPS9D1-201ENST00000389386 CIB3Q96Q77 187 aaPredicted RBP12.58□□□□□ -0.4
VPS9D1-201ENST00000389386 PSMG3Q9BT73 122 aaPredicted RBP12.58□□□□□ -0.4
VPS9D1-201ENST00000389386 TMEM9BQ9NQ34 198 aa12.58□□□□□ -0.4
VPS9D1-201ENST00000389386 TSPAN2O60636 221 aa12.58□□□□□ -0.4
VPS9D1-201ENST00000389386 IGLV3-1P01715 115 aa12.58□□□□□ -0.4
VPS9D1-201ENST00000389386 GNRHRP30968 328 aa12.58□□□□□ -0.4
VPS9D1-201ENST00000389386 CDKN1AP38936 164 aa12.58□□□□□ -0.4
VPS9D1-201ENST00000389386 FASLGP48023 281 aa12.58□□□□□ -0.4
VPS9D1-201ENST00000389386 TMEM41BQ5BJD5 291 aa12.58□□□□□ -0.4
VPS9D1-201ENST00000389386 GSX1Q9H4S2 264 aaPredicted RBP12.58□□□□□ -0.4
VPS9D1-201ENST00000389386 PLA2G3Q9NZ20 509 aa12.58□□□□□ -0.4
VPS9D1-201ENST00000389386 FER1L5A0AVI2 2057 aa12.57□□□□□ -0.4
VPS9D1-201ENST00000389386 GYPAP02724 150 aa12.57□□□□□ -0.4
VPS9D1-201ENST00000389386 PAFAH1B2P68402 229 aa12.57□□□□□ -0.4
VPS9D1-201ENST00000389386 TLE1Q04724 770 aa12.57□□□□□ -0.4
VPS9D1-201ENST00000389386 SHISA6Q6ZSJ9 500 aa12.57□□□□□ -0.4
VPS9D1-201ENST00000389386 ZNF295-AS1Q8N0V1 137 aa12.57□□□□□ -0.4
VPS9D1-201ENST00000389386 NUDT22Q9BRQ3 303 aa12.57□□□□□ -0.4
VPS9D1-201ENST00000389386 PLK3Q9H4B4 646 aa12.57□□□□□ -0.4
VPS9D1-201ENST00000389386 H3BP45 60 aa12.57□□□□□ -0.4
VPS9D1-201ENST00000389386 K7ESF4 209 aa12.57□□□□□ -0.4
VPS9D1-201ENST00000389386 PPYP01298 95 aa12.57□□□□□ -0.4
VPS9D1-201ENST00000389386 TMEM267Q0VDI3 215 aaPredicted RBP12.57□□□□□ -0.4
VPS9D1-201ENST00000389386 UBALD2Q8IYN6 164 aa12.57□□□□□ -0.4
VPS9D1-201ENST00000389386 LYG1Q8N1E2 194 aa12.57□□□□□ -0.4
VPS9D1-201ENST00000389386 SLC24A4Q8NFF2 622 aa12.57□□□□□ -0.4
VPS9D1-201ENST00000389386 VN1R17PQ8TDU5 208 aa12.57□□□□□ -0.4
VPS9D1-201ENST00000389386 PP6455Q8WZ26 134 aa12.57□□□□□ -0.4
VPS9D1-201ENST00000389386 CLDN23Q96B33 292 aa12.57□□□□□ -0.4
VPS9D1-201ENST00000389386 PGAM5Q96HS1 289 aa12.57□□□□□ -0.4
VPS9D1-201ENST00000389386 TECTBQ96PL2 329 aa12.57□□□□□ -0.4
VPS9D1-201ENST00000389386 TAAR3PQ9P1P4 343 aa12.57□□□□□ -0.4
VPS9D1-201ENST00000389386 A0A0U1RQK1 487 aa12.56□□□□□ -0.4
VPS9D1-201ENST00000389386 DUXBA0A1W2PPF3 345 aa12.56□□□□□ -0.4
VPS9D1-201ENST00000389386 ZNF320A2RRD8 509 aa12.56□□□□□ -0.4
VPS9D1-201ENST00000389386 TMEM150CB9EJG8 249 aa12.56□□□□□ -0.4
VPS9D1-201ENST00000389386 ANGPTL7O43827 346 aa12.56□□□□□ -0.4
VPS9D1-201ENST00000389386 VDAC1P21796 283 aa12.56□□□□□ -0.4
VPS9D1-201ENST00000389386 EPHA8P29322 1005 aaPredicted RBP12.56□□□□□ -0.4
VPS9D1-201ENST00000389386 EFNA3P52797 238 aa12.56□□□□□ -0.4
VPS9D1-201ENST00000389386 TPPP2P59282 170 aa12.56□□□□□ -0.4
VPS9D1-201ENST00000389386 SERF2P84101 59 aa12.56□□□□□ -0.4
VPS9D1-201ENST00000389386 TMEM144Q7Z5S9 345 aa12.56□□□□□ -0.4
VPS9D1-201ENST00000389386 OR1L6Q8NGR2 347 aa12.56□□□□□ -0.4
VPS9D1-201ENST00000389386 MRPL30Q8TCC3 161 aaKnown RBP12.56□□□□□ -0.4
VPS9D1-201ENST00000389386 NAT6Q93015 286 aa12.56□□□□□ -0.4
VPS9D1-201ENST00000389386 TRAPPC6AO75865 159 aa12.56□□□□□ -0.4
VPS9D1-201ENST00000389386 COMPP49747 757 aaPredicted RBP12.56□□□□□ -0.4
VPS9D1-201ENST00000389386 CLDN17P56750 224 aa12.56□□□□□ -0.4
VPS9D1-201ENST00000389386 FAM78BQ5VT40 261 aa12.56□□□□□ -0.4
VPS9D1-201ENST00000389386 LHX4Q969G2 390 aa12.56□□□□□ -0.4
VPS9D1-201ENST00000389386 HSPB9Q9BQS6 159 aa12.56□□□□□ -0.4
VPS9D1-201ENST00000389386 TP53TG3Q9ULZ0 132 aa12.56□□□□□ -0.4
VPS9D1-201ENST00000389386 TRAV39A0A0B4J263 110 aa12.55□□□□□ -0.4
VPS9D1-201ENST00000389386 AQP7O14520 342 aa12.55□□□□□ -0.4
VPS9D1-201ENST00000389386 DHRS3O75911 302 aa12.55□□□□□ -0.4
VPS9D1-201ENST00000389386 IGKV3-11P04433 115 aa12.55□□□□□ -0.4
VPS9D1-201ENST00000389386 OR5G3P0C626 314 aa12.55□□□□□ -0.4
VPS9D1-201ENST00000389386 LINC00310P59036 64 aa12.55□□□□□ -0.4
VPS9D1-201ENST00000389386 CFHR1Q03591 330 aa12.55□□□□□ -0.4
VPS9D1-201ENST00000389386 UBE2V1Q13404 147 aa12.55□□□□□ -0.4
VPS9D1-201ENST00000389386 Q6ZPA2 131 aa12.55□□□□□ -0.4
VPS9D1-201ENST00000389386 CACNA1EQ15878 2313 aa12.55□□□□□ -0.4
VPS9D1-201ENST00000389386 CHRNA7P36544 502 aa12.55□□□□□ -0.4
VPS9D1-201ENST00000389386 DDIT4LQ96D03 193 aa12.55□□□□□ -0.4
VPS9D1-201ENST00000389386 GPHA2Q96T91 129 aa12.55□□□□□ -0.4
VPS9D1-201ENST00000389386 PLSCR2Q9NRY7 297 aa12.55□□□□□ -0.4
VPS9D1-201ENST00000389386 PIGLQ9Y2B2 252 aa12.55□□□□□ -0.4
VPS9D1-201ENST00000389386 MED12Q93074 2177 aa12.55□□□□□ -0.4
VPS9D1-201ENST00000389386 LOC105371242A0A075B767 164 aa12.54□□□□□ -0.4
VPS9D1-201ENST00000389386 A0A1W2PN81 502 aa12.54□□□□□ -0.4
VPS9D1-201ENST00000389386 S100A7P31151 101 aa12.54□□□□□ -0.4
VPS9D1-201ENST00000389386 PSMB3P49720 205 aa12.54□□□□□ -0.4
VPS9D1-201ENST00000389386 GRB2P62993 217 aaKnown RBP12.54□□□□□ -0.4
VPS9D1-201ENST00000389386 RNF151Q2KHN1 245 aa12.54□□□□□ -0.4
VPS9D1-201ENST00000389386 ZNF525Q8N782 197 aa12.54□□□□□ -0.4
VPS9D1-201ENST00000389386 SLC39A9Q9NUM3 307 aa12.54□□□□□ -0.4
VPS9D1-201ENST00000389386 SLC45A2Q9UMX9 530 aa12.54□□□□□ -0.4
VPS9D1-201ENST00000389386 RPH3ALQ9UNE2 315 aa12.54□□□□□ -0.4
VPS9D1-201ENST00000389386 WIPI2Q9Y4P8 454 aa12.54□□□□□ -0.4
VPS9D1-201ENST00000389386 GRIFINA4D1Z8 144 aa12.54□□□□□ -0.4
VPS9D1-201ENST00000389386 VENTXO95231 258 aa12.54□□□□□ -0.4
VPS9D1-201ENST00000389386 TOMM40O96008 361 aa12.54□□□□□ -0.4
VPS9D1-201ENST00000389386 ESDP10768 282 aa12.54□□□□□ -0.4
VPS9D1-201ENST00000389386 ARL4DP49703 201 aa12.54□□□□□ -0.4
VPS9D1-201ENST00000389386 CLRN1P58418 232 aa12.54□□□□□ -0.4
VPS9D1-201ENST00000389386 ZXDAP98168 799 aa12.54□□□□□ -0.4
VPS9D1-201ENST00000389386 PLCXD2Q0VAA5 305 aa12.54□□□□□ -0.4
VPS9D1-201ENST00000389386 TESK1Q15569 626 aa12.54□□□□□ -0.4
VPS9D1-201ENST00000389386 ATP6V1FQ16864 119 aa12.54□□□□□ -0.4
VPS9D1-201ENST00000389386 FAM180AQ6UWF9 173 aa12.54□□□□□ -0.4
VPS9D1-201ENST00000389386 ZNF721Q8TF20 911 aa12.54□□□□□ -0.4
VPS9D1-201ENST00000389386 PINX1Q96BK5 328 aaKnown RBP12.54□□□□□ -0.4
VPS9D1-201ENST00000389386 ALKBH7Q9BT30 221 aaPredicted RBP12.54□□□□□ -0.4
VPS9D1-201ENST00000389386 GPR179Q6PRD1 2367 aa12.54□□□□□ -0.4
VPS9D1-201ENST00000389386 LMO7DNF2Z398 122 aa12.53□□□□□ -0.4
VPS9D1-201ENST00000389386 SPRY1O43609 319 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms