RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 EIF4EBP2Q13542 120 aaPredicted RBP4.3□□□□□ -1.72
PTPRD-203ENST00000381196 ZXDCQ2QGD7 858 aaPredicted RBP4.3□□□□□ -1.72
PTPRD-203ENST00000381196 IER5LQ5T953 404 aa4.3□□□□□ -1.72
PTPRD-203ENST00000381196 LCN10Q6JVE6 187 aa4.3□□□□□ -1.72
PTPRD-203ENST00000381196 ALKBH7Q9BT30 221 aaPredicted RBP4.3□□□□□ -1.72
PTPRD-203ENST00000381196 SMIM3Q9BZL3 60 aa4.3□□□□□ -1.72
PTPRD-203ENST00000381196 COA3Q9Y2R0 106 aaPredicted RBP4.3□□□□□ -1.72
PTPRD-203ENST00000381196 IFNL4K9M1U5 179 aa4.3□□□□□ -1.72
PTPRD-203ENST00000381196 TNFSF13O75888 250 aa4.3□□□□□ -1.72
PTPRD-203ENST00000381196 SELENOPP49908 381 aa4.3□□□□□ -1.72
PTPRD-203ENST00000381196 RND2P52198 227 aa4.3□□□□□ -1.72
PTPRD-203ENST00000381196 IFITM3Q01628 133 aa4.3□□□□□ -1.72
PTPRD-203ENST00000381196 OR1C1Q15619 314 aa4.3□□□□□ -1.72
PTPRD-203ENST00000381196 COA6Q5JTJ3 125 aaKnown RBP4.3□□□□□ -1.72
PTPRD-203ENST00000381196 PIGCQ92535 297 aa4.3□□□□□ -1.72
PTPRD-203ENST00000381196 FBXO17Q96EF6 278 aa4.3□□□□□ -1.72
PTPRD-203ENST00000381196 GDF15Q99988 308 aa4.3□□□□□ -1.72
PTPRD-203ENST00000381196 ADAT1Q9BUB4 502 aaKnown RBP4.3□□□□□ -1.72
PTPRD-203ENST00000381196 SIRT3Q9NTG7 399 aaPredicted RBP4.3□□□□□ -1.72
PTPRD-203ENST00000381196 OBSL1O75147 1896 aa4.3□□□□□ -1.72
PTPRD-203ENST00000381196 C2CD3Q4AC94 2353 aa4.3□□□□□ -1.72
PTPRD-203ENST00000381196 CORTO00230 105 aa4.3□□□□□ -1.72
PTPRD-203ENST00000381196 CCL7P80098 99 aa4.3□□□□□ -1.72
PTPRD-203ENST00000381196 HIST1H1AQ02539 215 aaPredicted RBP4.3□□□□□ -1.72
PTPRD-203ENST00000381196 PRSS36Q5K4E3 855 aa4.3□□□□□ -1.72
PTPRD-203ENST00000381196 METRNLQ641Q3 311 aa4.3□□□□□ -1.72
PTPRD-203ENST00000381196 C11orf42Q8N5U0 333 aa4.3□□□□□ -1.72
PTPRD-203ENST00000381196 OR2A1Q8NGT9 310 aa4.3□□□□□ -1.72
PTPRD-203ENST00000381196 FOXJ2Q9P0K8 574 aa4.3□□□□□ -1.72
PTPRD-203ENST00000381196 PIPOXQ9P0Z9 390 aa4.3□□□□□ -1.72
PTPRD-203ENST00000381196 C11orf94C9JXX5 98 aa4.3□□□□□ -1.72
PTPRD-203ENST00000381196 BLVRBP30043 206 aaPredicted RBP4.3□□□□□ -1.72
PTPRD-203ENST00000381196 MFAP5Q13361 173 aa4.3□□□□□ -1.72
PTPRD-203ENST00000381196 RPS26P11Q5JNZ5 115 aaPredicted RBP4.3□□□□□ -1.72
PTPRD-203ENST00000381196 DTD1Q8TEA8 209 aa4.3□□□□□ -1.72
PTPRD-203ENST00000381196 SNX22Q96L94 193 aa4.3□□□□□ -1.72
PTPRD-203ENST00000381196 MGST2Q99735 147 aa4.3□□□□□ -1.72
PTPRD-203ENST00000381196 FLRT3Q9NZU0 649 aa4.3□□□□□ -1.72
PTPRD-203ENST00000381196 MBD1Q9UIS9 605 aaPredicted RBP4.3□□□□□ -1.72
PTPRD-203ENST00000381196 TNCP24821 2201 aa4.3□□□□□ -1.72
PTPRD-203ENST00000381196 IGHV3-20A0A0C4DH32 117 aa4.3□□□□□ -1.72
PTPRD-203ENST00000381196 C9JCJ5 164 aa4.3□□□□□ -1.72
PTPRD-203ENST00000381196 HAX1O00165 279 aa4.3□□□□□ -1.72
PTPRD-203ENST00000381196 HS3ST1O14792 307 aa4.3□□□□□ -1.72
PTPRD-203ENST00000381196 NME2P1O60361 137 aa4.3□□□□□ -1.72
PTPRD-203ENST00000381196 UCP1P25874 307 aa4.3□□□□□ -1.72
PTPRD-203ENST00000381196 KIR2DL2P43627 348 aaPredicted RBP4.3□□□□□ -1.72
PTPRD-203ENST00000381196 SMAD2Q15796 467 aaKnown RBP4.3□□□□□ -1.72
PTPRD-203ENST00000381196 HLA-DRB5Q30154 266 aa4.3□□□□□ -1.72
PTPRD-203ENST00000381196 OR1L1Q8NH94 360 aa4.3□□□□□ -1.72
PTPRD-203ENST00000381196 SELENOIQ9C0D9 397 aa4.3□□□□□ -1.72
PTPRD-203ENST00000381196 TRAV8-7A0A075B6U6 113 aa4.29□□□□□ -1.72
PTPRD-203ENST00000381196 TMED7-TICAM2A0A0A6YYA0 188 aa4.29□□□□□ -1.72
PTPRD-203ENST00000381196 TMEM8BA6NDV4 472 aa4.29□□□□□ -1.72
PTPRD-203ENST00000381196 S1PR2O95136 353 aa4.29□□□□□ -1.72
PTPRD-203ENST00000381196 ALOX5APP20292 161 aa4.29□□□□□ -1.72
PTPRD-203ENST00000381196 CDC34P49427 236 aaPredicted RBP4.29□□□□□ -1.72
PTPRD-203ENST00000381196 SLC35B1P78383 322 aa4.29□□□□□ -1.72
PTPRD-203ENST00000381196 AMMECR1LQ6DCA0 310 aa4.29□□□□□ -1.72
PTPRD-203ENST00000381196 FAM166AQ6J272 317 aa4.29□□□□□ -1.72
PTPRD-203ENST00000381196 TMEM182Q6ZP80 229 aaPredicted RBP4.29□□□□□ -1.72
PTPRD-203ENST00000381196 Q6ZS49 121 aa4.29□□□□□ -1.72
PTPRD-203ENST00000381196 GLRX5Q86SX6 157 aa4.29□□□□□ -1.72
PTPRD-203ENST00000381196 REG4Q9BYZ8 158 aa4.29□□□□□ -1.72
PTPRD-203ENST00000381196 BARHL1Q9BZE3 327 aa4.29□□□□□ -1.72
PTPRD-203ENST00000381196 CES1P1Q9UKY3 287 aa4.29□□□□□ -1.72
PTPRD-203ENST00000381196 BMPR1BO00238 502 aa4.29□□□□□ -1.72
PTPRD-203ENST00000381196 GALR2O43603 387 aaPredicted RBP4.29□□□□□ -1.72
PTPRD-203ENST00000381196 PDCD6O75340 191 aa4.29□□□□□ -1.72
PTPRD-203ENST00000381196 UTS2O95399 124 aa4.29□□□□□ -1.72
PTPRD-203ENST00000381196 CD22P20273 847 aa4.29□□□□□ -1.72
PTPRD-203ENST00000381196 AVPR2P30518 371 aa4.29□□□□□ -1.72
PTPRD-203ENST00000381196 PPOXP50336 477 aa4.29□□□□□ -1.72
PTPRD-203ENST00000381196 RIPPLY3P57055 190 aa4.29□□□□□ -1.72
PTPRD-203ENST00000381196 ZNF385CQ66K41 422 aaPredicted RBP4.29□□□□□ -1.72
PTPRD-203ENST00000381196 LHX8Q68G74 356 aa4.29□□□□□ -1.72
PTPRD-203ENST00000381196 YRDCQ86U90 279 aaKnown RBP4.29□□□□□ -1.72
PTPRD-203ENST00000381196 GALMQ96C23 342 aa4.29□□□□□ -1.72
PTPRD-203ENST00000381196 A0A1B0GV90 55 aa4.29□□□□□ -1.72
PTPRD-203ENST00000381196 C22orf46C9J442 243 aa4.29□□□□□ -1.72
PTPRD-203ENST00000381196 TSPAN2O60636 221 aa4.29□□□□□ -1.72
PTPRD-203ENST00000381196 CLEC2LP0C7M8 214 aa4.29□□□□□ -1.72
PTPRD-203ENST00000381196 RPS27LQ71UM5 84 aaKnown RBP4.29□□□□□ -1.72
PTPRD-203ENST00000381196 WDFY1Q8IWB7 410 aa4.29□□□□□ -1.72
PTPRD-203ENST00000381196 APOBEC3DQ96AK3 386 aaPredicted RBP4.29□□□□□ -1.72
PTPRD-203ENST00000381196 OXGR1Q96P68 337 aa4.29□□□□□ -1.72
PTPRD-203ENST00000381196 SDHCQ99643 169 aaPredicted RBP4.29□□□□□ -1.72
PTPRD-203ENST00000381196 CLCF1Q9UBD9 225 aa4.29□□□□□ -1.72
PTPRD-203ENST00000381196 ZNF320A2RRD8 509 aa4.29□□□□□ -1.72
PTPRD-203ENST00000381196 ZNF716A6NP11 495 aa4.29□□□□□ -1.72
PTPRD-203ENST00000381196 E9PQ18 207 aa4.29□□□□□ -1.72
PTPRD-203ENST00000381196 K7ESM1 405 aa4.29□□□□□ -1.72
PTPRD-203ENST00000381196 SSSCA1O60232 199 aa4.29□□□□□ -1.72
PTPRD-203ENST00000381196 ACAA1P09110 424 aaPredicted RBP4.29□□□□□ -1.72
PTPRD-203ENST00000381196 ZNF250P15622 560 aa4.29□□□□□ -1.72
PTPRD-203ENST00000381196 KIR2DL1P43626 348 aaPredicted RBP4.29□□□□□ -1.72
PTPRD-203ENST00000381196 SLC38A11Q08AI6 406 aa4.29□□□□□ -1.72
PTPRD-203ENST00000381196 GABRA6Q16445 453 aa4.29□□□□□ -1.72
PTPRD-203ENST00000381196 TCTN1Q2MV58 587 aa4.29□□□□□ -1.72
PTPRD-203ENST00000381196 HEPN1Q6WQI6 88 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms