RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 RBM7Q9Y580 266 aaKnown RBP19.44■□□□□ 0.7
VPS16-201ENST00000380443 ZNF705EA8MWA4 302 aaPredicted RBP19.43■□□□□ 0.7
VPS16-201ENST00000380443 WNT9BO14905 357 aa19.43■□□□□ 0.7
VPS16-201ENST00000380443 SEC11BP0C7V7 166 aa19.43■□□□□ 0.7
VPS16-201ENST00000380443 RPRMLQ8N4K4 120 aa19.43■□□□□ 0.7
VPS16-201ENST00000380443 OR2C3Q8N628 320 aa19.43■□□□□ 0.7
VPS16-201ENST00000380443 PPP1R35Q8TAP8 253 aa19.43■□□□□ 0.7
VPS16-201ENST00000380443 FAM216AQ8WUB2 273 aa19.43■□□□□ 0.7
VPS16-201ENST00000380443 KMT2BQ9UMN6 2715 aaPredicted RBP19.43■□□□□ 0.7
VPS16-201ENST00000380443 IGLV3-9A0A075B6K5 115 aa19.42■□□□□ 0.7
VPS16-201ENST00000380443 B8ZZF3 427 aa19.42■□□□□ 0.7
VPS16-201ENST00000380443 LGALS8O00214 317 aa19.42■□□□□ 0.7
VPS16-201ENST00000380443 TDGF1P3P51864 188 aa19.42■□□□□ 0.7
VPS16-201ENST00000380443 SELENOVP59797 346 aa19.42■□□□□ 0.7
VPS16-201ENST00000380443 VAMP2P63027 116 aa19.42■□□□□ 0.7
VPS16-201ENST00000380443 OR2Z1Q8NG97 314 aa19.42■□□□□ 0.7
VPS16-201ENST00000380443 LRRC29Q8WV35 223 aa19.42■□□□□ 0.7
VPS16-201ENST00000380443 GINS3Q9BRX5 216 aa19.42■□□□□ 0.7
VPS16-201ENST00000380443 UFSP2Q9NUQ7 469 aa19.42■□□□□ 0.7
VPS16-201ENST00000380443 ITPR1Q14643 2758 aa19.42■□□□□ 0.7
VPS16-201ENST00000380443 IGHV3-64DA0A0J9YX35 117 aa19.41■□□□□ 0.7
VPS16-201ENST00000380443 SRRM5B3KS81 715 aa19.41■□□□□ 0.7
VPS16-201ENST00000380443 IGLV2-14P01704 120 aa19.41■□□□□ 0.7
VPS16-201ENST00000380443 IL2RGP31785 369 aa19.41■□□□□ 0.7
VPS16-201ENST00000380443 OR3A1P47881 315 aa19.41■□□□□ 0.7
VPS16-201ENST00000380443 SUN5Q8TC36 379 aa19.41■□□□□ 0.7
VPS16-201ENST00000380443 ERGIC1Q969X5 290 aa19.41■□□□□ 0.7
VPS16-201ENST00000380443 FAM212BQ9NTI7 297 aaPredicted RBP19.41■□□□□ 0.7
VPS16-201ENST00000380443 DUSP13Q9UII6 198 aa19.41■□□□□ 0.7
VPS16-201ENST00000380443 ZDHHC8Q9ULC8 765 aa19.41■□□□□ 0.7
VPS16-201ENST00000380443 TNFSF12O43508 249 aa19.41■□□□□ 0.7
VPS16-201ENST00000380443 CEBPDP49716 269 aaPredicted RBP19.41■□□□□ 0.7
VPS16-201ENST00000380443 COL10A1Q03692 680 aa19.41■□□□□ 0.7
VPS16-201ENST00000380443 TBR1Q16650 682 aa19.41■□□□□ 0.7
VPS16-201ENST00000380443 PRR18Q8N4B5 295 aa19.41■□□□□ 0.7
VPS16-201ENST00000380443 PARP11Q9NR21 331 aa19.41■□□□□ 0.7
VPS16-201ENST00000380443 LYRM2Q9NU23 88 aaPredicted RBP19.41■□□□□ 0.7
VPS16-201ENST00000380443 TP53TG5Q9Y2B4 290 aa19.41■□□□□ 0.7
VPS16-201ENST00000380443 CACNA1BQ00975 2339 aa19.4■□□□□ 0.7
VPS16-201ENST00000380443 TRAV39A0A0B4J263 110 aa19.4■□□□□ 0.7
VPS16-201ENST00000380443 C12orf77C9JDV5 145 aa19.4■□□□□ 0.7
VPS16-201ENST00000380443 PITX3O75364 302 aa19.4■□□□□ 0.7
VPS16-201ENST00000380443 RAB5CP51148 216 aa19.4■□□□□ 0.7
VPS16-201ENST00000380443 BAXQ07812 192 aa19.4■□□□□ 0.7
VPS16-201ENST00000380443 ZNF645Q8N7E2 425 aa19.4■□□□□ 0.7
VPS16-201ENST00000380443 TCTEX1D1Q8N7M0 179 aa19.4■□□□□ 0.7
VPS16-201ENST00000380443 NINJ1Q92982 152 aa19.4■□□□□ 0.7
VPS16-201ENST00000380443 LUZP4Q9P127 313 aa19.4■□□□□ 0.7
VPS16-201ENST00000380443 MGAQ8IWI9 3026 aa19.4■□□□□ 0.7
VPS16-201ENST00000380443 PRDX2P32119 198 aa19.39■□□□□ 0.7
VPS16-201ENST00000380443 EWSR1Q01844 656 aaKnown RBP eCLIP19.39■□□□□ 0.7
VPS16-201ENST00000380443 PJVKQ0ZLH3 352 aa19.39■□□□□ 0.7
VPS16-201ENST00000380443 ZNF266Q14584 549 aa19.39■□□□□ 0.7
VPS16-201ENST00000380443 KRBOX4Q5JUW0 171 aa19.39■□□□□ 0.7
VPS16-201ENST00000380443 DOLPP1Q86YN1 238 aa19.39■□□□□ 0.7
VPS16-201ENST00000380443 COQ2Q96H96 371 aa19.39■□□□□ 0.7
VPS16-201ENST00000380443 WRBO00258 174 aa19.39■□□□□ 0.69
VPS16-201ENST00000380443 OR8U9P0C7N5 309 aa19.39■□□□□ 0.69
VPS16-201ENST00000380443 PSG2P11465 335 aa19.39■□□□□ 0.69
VPS16-201ENST00000380443 GATA4P43694 442 aa19.39■□□□□ 0.69
VPS16-201ENST00000380443 POLR2GP62487 172 aaKnown RBP eCLIP19.39■□□□□ 0.69
VPS16-201ENST00000380443 AESQ08117 197 aa19.39■□□□□ 0.69
VPS16-201ENST00000380443 BPIFCQ8NFQ6 507 aa19.39■□□□□ 0.69
VPS16-201ENST00000380443 OR8U1Q8NH10 309 aa19.39■□□□□ 0.69
VPS16-201ENST00000380443 OR51H1Q8NH63 302 aa19.39■□□□□ 0.69
VPS16-201ENST00000380443 TMEM171Q8WVE6 324 aa19.39■□□□□ 0.69
VPS16-201ENST00000380443 SMIM3Q9BZL3 60 aa19.39■□□□□ 0.69
VPS16-201ENST00000380443 KCNS2Q9ULS6 477 aa19.39■□□□□ 0.69
VPS16-201ENST00000380443 NBEAQ8NFP9 2946 aa19.38■□□□□ 0.69
VPS16-201ENST00000380443 HBZP02008 142 aa19.38■□□□□ 0.69
VPS16-201ENST00000380443 GABRA2P47869 451 aa19.38■□□□□ 0.69
VPS16-201ENST00000380443 MST1LQ2TV78 715 aa19.38■□□□□ 0.69
VPS16-201ENST00000380443 MEGF10Q96KG7 1140 aa19.38■□□□□ 0.69
VPS16-201ENST00000380443 SNX22Q96L94 193 aa19.38■□□□□ 0.69
VPS16-201ENST00000380443 NCOR1P1Q9H4R4 102 aa19.38■□□□□ 0.69
VPS16-201ENST00000380443 PPP1R3CQ9UQK1 317 aa19.38■□□□□ 0.69
VPS16-201ENST00000380443 ZNF835Q9Y2P0 537 aa19.38■□□□□ 0.69
VPS16-201ENST00000380443 MED6O75586 246 aa19.37■□□□□ 0.69
VPS16-201ENST00000380443 ADH4P08319 380 aa19.37■□□□□ 0.69
VPS16-201ENST00000380443 SPP1P10451 314 aa19.37■□□□□ 0.69
VPS16-201ENST00000380443 HTD2P86397 168 aa19.37■□□□□ 0.69
VPS16-201ENST00000380443 CXorf66Q5JRM2 361 aaPredicted RBP19.37■□□□□ 0.69
VPS16-201ENST00000380443 PXDC1Q5TGL8 231 aa19.37■□□□□ 0.69
VPS16-201ENST00000380443 LRP11Q86VZ4 500 aa19.37■□□□□ 0.69
VPS16-201ENST00000380443 DRAM1Q8N682 238 aa19.37■□□□□ 0.69
VPS16-201ENST00000380443 NUP37Q8NFH4 326 aa19.37■□□□□ 0.69
VPS16-201ENST00000380443 OR1L1Q8NH94 360 aa19.37■□□□□ 0.69
VPS16-201ENST00000380443 GPR146Q96CH1 333 aa19.37■□□□□ 0.69
VPS16-201ENST00000380443 RAB40CQ96S21 281 aa19.37■□□□□ 0.69
VPS16-201ENST00000380443 SPINT2O43291 252 aa19.37■□□□□ 0.69
VPS16-201ENST00000380443 ATG12O94817 140 aa19.37■□□□□ 0.69
VPS16-201ENST00000380443 GZMHP20718 246 aa19.37■□□□□ 0.69
VPS16-201ENST00000380443 F2RL1P55085 397 aa19.37■□□□□ 0.69
VPS16-201ENST00000380443 MSMPQ1L6U9 139 aa19.37■□□□□ 0.69
VPS16-201ENST00000380443 SWI5Q1ZZU3 235 aa19.37■□□□□ 0.69
VPS16-201ENST00000380443 GPHA2Q96T91 129 aa19.37■□□□□ 0.69
VPS16-201ENST00000380443 WFDC1Q9HC57 220 aa19.37■□□□□ 0.69
VPS16-201ENST00000380443 STRAPQ9Y3F4 350 aaKnown RBP19.37■□□□□ 0.69
VPS16-201ENST00000380443 HEATR1Q9H583 2144 aaKnown RBP19.36■□□□□ 0.69
VPS16-201ENST00000380443 ZSCAN5BA6NJL1 495 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms