RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 LGI3Q8N145 548 aa8.08□□□□□ -1.12
PTPRA-204ENST00000380393 GNPNAT1Q96EK6 184 aaPredicted RBP8.08□□□□□ -1.12
PTPRA-204ENST00000380393 PRSS27Q9BQR3 290 aa8.08□□□□□ -1.12
PTPRA-204ENST00000380393 C19orf24Q9BVV8 132 aa8.08□□□□□ -1.12
PTPRA-204ENST00000380393 MOB1AQ9H8S9 216 aa8.08□□□□□ -1.12
PTPRA-204ENST00000380393 OBP2AQ9NY56 170 aa8.08□□□□□ -1.12
PTPRA-204ENST00000380393 MTCH1Q9NZJ7 389 aa8.08□□□□□ -1.12
PTPRA-204ENST00000380393 B3GALT5Q9Y2C3 310 aa8.08□□□□□ -1.12
PTPRA-204ENST00000380393 TRAV9-2A0A087WT02 112 aa8.07□□□□□ -1.12
PTPRA-204ENST00000380393 C7orf71A4D174 169 aa8.07□□□□□ -1.12
PTPRA-204ENST00000380393 C5orf67F2Z3F1 127 aa8.07□□□□□ -1.12
PTPRA-204ENST00000380393 K7ESM1 405 aa8.07□□□□□ -1.12
PTPRA-204ENST00000380393 SDCBPO00560 298 aaPredicted RBP8.07□□□□□ -1.12
PTPRA-204ENST00000380393 ARPC3O15145 178 aa8.07□□□□□ -1.12
PTPRA-204ENST00000380393 CELA3BP08861 270 aa8.07□□□□□ -1.12
PTPRA-204ENST00000380393 CELA3AP09093 270 aa8.07□□□□□ -1.12
PTPRA-204ENST00000380393 FAM87AP0C7U9 286 aa8.07□□□□□ -1.12
PTPRA-204ENST00000380393 IGLL1P15814 213 aa8.07□□□□□ -1.12
PTPRA-204ENST00000380393 IGFBP4P22692 258 aa8.07□□□□□ -1.12
PTPRA-204ENST00000380393 RPS27P42677 84 aaKnown RBP8.07□□□□□ -1.12
PTPRA-204ENST00000380393 RPL32P62910 135 aaKnown RBP8.07□□□□□ -1.12
PTPRA-204ENST00000380393 RNF44Q7L0R7 432 aa8.07□□□□□ -1.12
PTPRA-204ENST00000380393 OR2I1PQ8NGU4 316 aa8.07□□□□□ -1.12
PTPRA-204ENST00000380393 NEUROG1Q92886 237 aa8.07□□□□□ -1.12
PTPRA-204ENST00000380393 SCARF2Q96GP6 870 aaPredicted RBP8.07□□□□□ -1.12
PTPRA-204ENST00000380393 NMNAT3Q96T66 252 aa8.07□□□□□ -1.12
PTPRA-204ENST00000380393 TMEM204Q9BSN7 226 aa8.07□□□□□ -1.12
PTPRA-204ENST00000380393 NPFFR1Q9GZQ6 430 aa8.07□□□□□ -1.12
PTPRA-204ENST00000380393 ANAPC1Q9H1A4 1944 aa8.07□□□□□ -1.12
PTPRA-204ENST00000380393 GPR1P46091 355 aa8.07□□□□□ -1.12
PTPRA-204ENST00000380393 LHX2P50458 406 aa8.07□□□□□ -1.12
PTPRA-204ENST00000380393 ZNF117Q03924 483 aa8.07□□□□□ -1.12
PTPRA-204ENST00000380393 PMCHL1Q16048 86 aa8.07□□□□□ -1.12
PTPRA-204ENST00000380393 C1QL3Q5VWW1 255 aa8.07□□□□□ -1.12
PTPRA-204ENST00000380393 TDHQ8IZJ6 230 aa8.07□□□□□ -1.12
PTPRA-204ENST00000380393 ARHGEF39Q8N4T4 335 aa8.07□□□□□ -1.12
PTPRA-204ENST00000380393 CNRIP1Q96F85 164 aaPredicted RBP8.07□□□□□ -1.12
PTPRA-204ENST00000380393 COPS7AQ9UBW8 275 aa8.07□□□□□ -1.12
PTPRA-204ENST00000380393 MED31Q9Y3C7 131 aa8.07□□□□□ -1.12
PTPRA-204ENST00000380393 UFC1Q9Y3C8 167 aa8.07□□□□□ -1.12
PTPRA-204ENST00000380393 IFNA1P01562 189 aa8.07□□□□□ -1.12
PTPRA-204ENST00000380393 SSBP2P81877 361 aaPredicted RBP8.07□□□□□ -1.12
PTPRA-204ENST00000380393 TGFBR3Q03167 851 aa8.07□□□□□ -1.12
PTPRA-204ENST00000380393 MEF2CQ06413 473 aaPredicted RBP8.07□□□□□ -1.12
PTPRA-204ENST00000380393 IL13RA2Q14627 380 aa8.07□□□□□ -1.12
PTPRA-204ENST00000380393 RAB1CQ92928 201 aa8.07□□□□□ -1.12
PTPRA-204ENST00000380393 BORCS7Q96B45 105 aa8.07□□□□□ -1.12
PTPRA-204ENST00000380393 TSSK2Q96PF2 358 aa8.07□□□□□ -1.12
PTPRA-204ENST00000380393 CENPMQ9NSP4 180 aa8.07□□□□□ -1.12
PTPRA-204ENST00000380393 TAS2R4Q9NYW5 299 aa8.07□□□□□ -1.12
PTPRA-204ENST00000380393 POLR1DQ9Y2S0 133 aa8.07□□□□□ -1.12
PTPRA-204ENST00000380393 WNT6Q9Y6F9 365 aa8.07□□□□□ -1.12
PTPRA-204ENST00000380393 A4D1N5 150 aa8.06□□□□□ -1.12
PTPRA-204ENST00000380393 CEACAM18A8MTB9 384 aa8.06□□□□□ -1.12
PTPRA-204ENST00000380393 PLPP3O14495 311 aa8.06□□□□□ -1.12
PTPRA-204ENST00000380393 HS3ST1O14792 307 aa8.06□□□□□ -1.12
PTPRA-204ENST00000380393 GYPAP02724 150 aa8.06□□□□□ -1.12
PTPRA-204ENST00000380393 CBLN1P23435 193 aa8.06□□□□□ -1.12
PTPRA-204ENST00000380393 ADIPOQQ15848 244 aa8.06□□□□□ -1.12
PTPRA-204ENST00000380393 COX19Q49B96 90 aa8.06□□□□□ -1.12
PTPRA-204ENST00000380393 DDIT4LQ96D03 193 aa8.06□□□□□ -1.12
PTPRA-204ENST00000380393 PERPQ96FX8 193 aa8.06□□□□□ -1.12
PTPRA-204ENST00000380393 SLC17A4Q9Y2C5 497 aa8.06□□□□□ -1.12
PTPRA-204ENST00000380393 HEATR5BQ9P2D3 2071 aa8.06□□□□□ -1.12
PTPRA-204ENST00000380393 A0A1W2PR80 420 aa8.06□□□□□ -1.12
PTPRA-204ENST00000380393 P2RY10O00398 339 aa8.06□□□□□ -1.12
PTPRA-204ENST00000380393 MPPED1O15442 326 aa8.06□□□□□ -1.12
PTPRA-204ENST00000380393 LATO43561 262 aa8.06□□□□□ -1.12
PTPRA-204ENST00000380393 FTH1P19P0C7X4 201 aa8.06□□□□□ -1.12
PTPRA-204ENST00000380393 GATA2P23769 480 aaPredicted RBP8.06□□□□□ -1.12
PTPRA-204ENST00000380393 FUT6P51993 359 aa8.06□□□□□ -1.12
PTPRA-204ENST00000380393 PLCXD2Q0VAA5 305 aa8.06□□□□□ -1.12
PTPRA-204ENST00000380393 OR1Q1Q15612 314 aa8.06□□□□□ -1.12
PTPRA-204ENST00000380393 TMEM25Q86YD3 366 aa8.06□□□□□ -1.12
PTPRA-204ENST00000380393 SULF2Q8IWU5 870 aa8.06□□□□□ -1.12
PTPRA-204ENST00000380393 EMG1Q92979 244 aaKnown RBP8.06□□□□□ -1.12
PTPRA-204ENST00000380393 RNF183Q96D59 192 aa8.06□□□□□ -1.12
PTPRA-204ENST00000380393 ZNF576Q9H609 170 aa8.06□□□□□ -1.12
PTPRA-204ENST00000380393 SRA1Q9HD15 236 aaKnown RBP8.06□□□□□ -1.12
PTPRA-204ENST00000380393 MRPL16Q9NX20 251 aaKnown RBP8.06□□□□□ -1.12
PTPRA-204ENST00000380393 ZNF443Q9Y2A4 671 aaPredicted RBP8.06□□□□□ -1.12
PTPRA-204ENST00000380393 CNTRLQ7Z7A1 2325 aa8.05□□□□□ -1.12
PTPRA-204ENST00000380393 C17orf112F2Z3M2 114 aa8.05□□□□□ -1.12
PTPRA-204ENST00000380393 MT-ATP6P00846 226 aa8.05□□□□□ -1.12
PTPRA-204ENST00000380393 ADH4P08319 380 aa8.05□□□□□ -1.12
PTPRA-204ENST00000380393 ZNF17P17021 662 aa8.05□□□□□ -1.12
PTPRA-204ENST00000380393 ZNF74Q16587 644 aa8.05□□□□□ -1.12
PTPRA-204ENST00000380393 VAX1Q5SQQ9 334 aa8.05□□□□□ -1.12
PTPRA-204ENST00000380393 BRICD5Q6PL45 260 aa8.05□□□□□ -1.12
PTPRA-204ENST00000380393 CPEB2Q7Z5Q1 589 aaKnown RBP8.05□□□□□ -1.12
PTPRA-204ENST00000380393 OR2C3Q8N628 320 aa8.05□□□□□ -1.12
PTPRA-204ENST00000380393 OR5C1Q8NGR4 320 aa8.05□□□□□ -1.12
PTPRA-204ENST00000380393 SLC35A4Q96G79 324 aa8.05□□□□□ -1.12
PTPRA-204ENST00000380393 AGMATQ9BSE5 352 aa8.05□□□□□ -1.12
PTPRA-204ENST00000380393 ATG2AQ2TAZ0 1938 aa8.05□□□□□ -1.12
PTPRA-204ENST00000380393 TRAV1-1A0A0B4J248 108 aa8.05□□□□□ -1.12
PTPRA-204ENST00000380393 ZNF732B4DXR9 585 aa8.05□□□□□ -1.12
PTPRA-204ENST00000380393 B5MCH6 92 aa8.05□□□□□ -1.12
PTPRA-204ENST00000380393 K7EP34 96 aa8.05□□□□□ -1.12
PTPRA-204ENST00000380393 SOX1O00570 391 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms