RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 RPL11P62913 178 aaKnown RBP11.36□□□□□ -0.59
NPHP4-203ENST00000378169 KLF14Q8TD94 323 aaPredicted RBP11.36□□□□□ -0.59
NPHP4-203ENST00000378169 RPEQ96AT9 228 aa11.36□□□□□ -0.59
NPHP4-203ENST00000378169 PRDM14Q9GZV8 571 aa11.36□□□□□ -0.59
NPHP4-203ENST00000378169 V9GYS6 101 aa11.36□□□□□ -0.59
NPHP4-203ENST00000378169 ATP6V0CP27449 155 aa11.35□□□□□ -0.59
NPHP4-203ENST00000378169 OPRK1P41145 380 aa11.35□□□□□ -0.59
NPHP4-203ENST00000378169 RAB13P51153 203 aa11.35□□□□□ -0.59
NPHP4-203ENST00000378169 P2RY6Q15077 328 aa11.35□□□□□ -0.59
NPHP4-203ENST00000378169 COMMD1Q8N668 190 aa11.35□□□□□ -0.59
NPHP4-203ENST00000378169 HES4Q9HCC6 221 aa11.35□□□□□ -0.59
NPHP4-203ENST00000378169 OR1A1Q9P1Q5 309 aa11.35□□□□□ -0.59
NPHP4-203ENST00000378169 MKI67P46013 3256 aaKnown RBP11.35□□□□□ -0.59
NPHP4-203ENST00000378169 TRAV38-1A0A0B4J264 116 aa11.35□□□□□ -0.59
NPHP4-203ENST00000378169 PRSS44E7EML9 344 aa11.35□□□□□ -0.59
NPHP4-203ENST00000378169 CLDN14O95500 239 aa11.35□□□□□ -0.59
NPHP4-203ENST00000378169 ZNF345Q14585 488 aa11.35□□□□□ -0.59
NPHP4-203ENST00000378169 VMA21Q3ZAQ7 101 aa11.35□□□□□ -0.59
NPHP4-203ENST00000378169 TRAT1Q6PIZ9 186 aa11.35□□□□□ -0.59
NPHP4-203ENST00000378169 OR10S1Q8NGN2 331 aa11.35□□□□□ -0.59
NPHP4-203ENST00000378169 OR10G4Q8NGN3 311 aa11.35□□□□□ -0.59
NPHP4-203ENST00000378169 OR10G9Q8NGN4 311 aa11.35□□□□□ -0.59
NPHP4-203ENST00000378169 OR10G7Q8NGN6 311 aa11.35□□□□□ -0.59
NPHP4-203ENST00000378169 GFI1Q99684 422 aa11.35□□□□□ -0.59
NPHP4-203ENST00000378169 GAL3ST2Q9H3Q3 398 aa11.35□□□□□ -0.59
NPHP4-203ENST00000378169 NOTCH2Q04721 2471 aa11.35□□□□□ -0.59
NPHP4-203ENST00000378169 NCBP2LA6PVI3 153 aaKnown RBP11.35□□□□□ -0.59
NPHP4-203ENST00000378169 AHRRA9YTQ3 701 aa11.35□□□□□ -0.59
NPHP4-203ENST00000378169 CD74P04233 296 aa11.35□□□□□ -0.59
NPHP4-203ENST00000378169 BTCP35070 178 aa11.35□□□□□ -0.59
NPHP4-203ENST00000378169 REG1BP48304 166 aa11.35□□□□□ -0.59
NPHP4-203ENST00000378169 OR51I2Q9H344 312 aa11.35□□□□□ -0.59
NPHP4-203ENST00000378169 Q9N2K0 584 aa11.35□□□□□ -0.59
NPHP4-203ENST00000378169 DOK5Q9P104 306 aa11.35□□□□□ -0.59
NPHP4-203ENST00000378169 POMT1Q9Y6A1 747 aa11.35□□□□□ -0.59
NPHP4-203ENST00000378169 FAM157AC9JC47 383 aa11.34□□□□□ -0.59
NPHP4-203ENST00000378169 HBZP02008 142 aa11.34□□□□□ -0.59
NPHP4-203ENST00000378169 MBPP02686 304 aaPredicted RBP11.34□□□□□ -0.59
NPHP4-203ENST00000378169 ZNF883P0CG24 379 aa11.34□□□□□ -0.59
NPHP4-203ENST00000378169 ERVS71-1P61550 626 aa11.34□□□□□ -0.59
NPHP4-203ENST00000378169 PLAURQ03405 335 aa11.34□□□□□ -0.59
NPHP4-203ENST00000378169 HABP2Q14520 560 aaPredicted RBP11.34□□□□□ -0.59
NPHP4-203ENST00000378169 OR4S2Q8NH73 311 aa11.34□□□□□ -0.59
NPHP4-203ENST00000378169 SSMEM1Q8WWF3 244 aa11.34□□□□□ -0.59
NPHP4-203ENST00000378169 SOSTQ9BQB4 213 aa11.34□□□□□ -0.59
NPHP4-203ENST00000378169 HIF1ANQ9NWT6 349 aa11.34□□□□□ -0.59
NPHP4-203ENST00000378169 HELZP42694 1942 aaKnown RBP11.34□□□□□ -0.59
NPHP4-203ENST00000378169 DVL1O14640 695 aa11.34□□□□□ -0.59
NPHP4-203ENST00000378169 SYNGR3O43761 229 aa11.34□□□□□ -0.59
NPHP4-203ENST00000378169 OR1L1Q8NH94 360 aa11.34□□□□□ -0.59
NPHP4-203ENST00000378169 ITLN1Q8WWA0 313 aa11.34□□□□□ -0.59
NPHP4-203ENST00000378169 CCL13Q99616 98 aa11.34□□□□□ -0.59
NPHP4-203ENST00000378169 TRAF4Q9BUZ4 470 aaPredicted RBP11.34□□□□□ -0.59
NPHP4-203ENST00000378169 CLN8Q9UBY8 286 aa11.34□□□□□ -0.59
NPHP4-203ENST00000378169 WIPI2Q9Y4P8 454 aa11.34□□□□□ -0.59
NPHP4-203ENST00000378169 COX7A2P2O60397 106 aa11.34□□□□□ -0.59
NPHP4-203ENST00000378169 CLPSP04118 112 aa11.34□□□□□ -0.59
NPHP4-203ENST00000378169 RD3LP0DJH9 198 aa11.34□□□□□ -0.59
NPHP4-203ENST00000378169 APELAP0DMC3 54 aa11.34□□□□□ -0.59
NPHP4-203ENST00000378169 NQO2P16083 231 aa11.34□□□□□ -0.59
NPHP4-203ENST00000378169 SLC25A53Q5H9E4 307 aa11.34□□□□□ -0.59
NPHP4-203ENST00000378169 NSUN5P2Q63ZY6 315 aa11.34□□□□□ -0.59
NPHP4-203ENST00000378169 TMEM252Q8N6L7 170 aa11.34□□□□□ -0.59
NPHP4-203ENST00000378169 PRR7Q8TB68 274 aa11.34□□□□□ -0.59
NPHP4-203ENST00000378169 WNT2BQ93097 391 aa11.34□□□□□ -0.59
NPHP4-203ENST00000378169 GUCD1Q96NT3 240 aa11.34□□□□□ -0.59
NPHP4-203ENST00000378169 HSF4Q9ULV5 492 aa11.34□□□□□ -0.59
NPHP4-203ENST00000378169 IGKV1-9A0A0C4DH69 117 aa11.33□□□□□ -0.59
NPHP4-203ENST00000378169 EIF3GO75821 320 aaKnown RBP eCLIP11.33□□□□□ -0.59
NPHP4-203ENST00000378169 OR2A4O95047 310 aa11.33□□□□□ -0.59
NPHP4-203ENST00000378169 ASPHD2Q6ICH7 369 aa11.33□□□□□ -0.59
NPHP4-203ENST00000378169 ACSM6Q6P461 480 aa11.33□□□□□ -0.59
NPHP4-203ENST00000378169 VWA1Q6PCB0 445 aa11.33□□□□□ -0.59
NPHP4-203ENST00000378169 MISP3Q96FF7 219 aa11.33□□□□□ -0.59
NPHP4-203ENST00000378169 OR2A7Q96R45 310 aa11.33□□□□□ -0.59
NPHP4-203ENST00000378169 ATP5SQ99766 215 aa11.33□□□□□ -0.59
NPHP4-203ENST00000378169 CLDN16Q9Y5I7 305 aa11.33□□□□□ -0.59
NPHP4-203ENST00000378169 LAMA2P24043 3122 aaKnown RBP11.33□□□□□ -0.6
NPHP4-203ENST00000378169 hCG_38984A0A1B0GV85 526 aa11.33□□□□□ -0.6
NPHP4-203ENST00000378169 RBFOX3A6NFN3 312 aa11.33□□□□□ -0.6
NPHP4-203ENST00000378169 TMEM210A6NLX4 147 aa11.33□□□□□ -0.6
NPHP4-203ENST00000378169 ADH4P08319 380 aa11.33□□□□□ -0.6
NPHP4-203ENST00000378169 RPS2P15880 293 aaKnown RBP11.33□□□□□ -0.6
NPHP4-203ENST00000378169 ZNF835Q9Y2P0 537 aa11.33□□□□□ -0.6
NPHP4-203ENST00000378169 PINLYPA6NC86 204 aa11.33□□□□□ -0.6
NPHP4-203ENST00000378169 TSTD3H0UI37 97 aa11.33□□□□□ -0.6
NPHP4-203ENST00000378169 NTN3O00634 580 aaPredicted RBP11.33□□□□□ -0.6
NPHP4-203ENST00000378169 ZNF737O75373 536 aa11.33□□□□□ -0.6
NPHP4-203ENST00000378169 CDC34P49427 236 aaPredicted RBP11.33□□□□□ -0.6
NPHP4-203ENST00000378169 RPL31P62899 125 aaKnown RBP11.33□□□□□ -0.6
NPHP4-203ENST00000378169 MOB3AQ96BX8 217 aa11.33□□□□□ -0.6
NPHP4-203ENST00000378169 TMEM56Q96MV1 263 aa11.33□□□□□ -0.6
NPHP4-203ENST00000378169 TMEM147Q9BVK8 224 aa11.33□□□□□ -0.6
NPHP4-203ENST00000378169 PPP1R14DQ9NXH3 145 aa11.33□□□□□ -0.6
NPHP4-203ENST00000378169 RHBDL1O75783 438 aa11.33□□□□□ -0.6
NPHP4-203ENST00000378169 HOXA6P31267 233 aa11.33□□□□□ -0.6
NPHP4-203ENST00000378169 SULT1A1P50225 295 aa11.33□□□□□ -0.6
NPHP4-203ENST00000378169 AWAT1Q58HT5 328 aa11.33□□□□□ -0.6
NPHP4-203ENST00000378169 OR52M1Q8NGK5 317 aa11.33□□□□□ -0.6
NPHP4-203ENST00000378169 TMEM222Q9H0R3 208 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms