RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 FPR2P25090 351 aa6.88□□□□□ -1.31
CKAP2-203ENST00000378037 HOXA1P49639 335 aaPredicted RBP6.88□□□□□ -1.31
CKAP2-203ENST00000378037 CYCSP99999 105 aaKnown RBP6.88□□□□□ -1.31
CKAP2-203ENST00000378037 OR2F1Q13607 317 aa6.88□□□□□ -1.31
CKAP2-203ENST00000378037 GABRA6Q16445 453 aa6.88□□□□□ -1.31
CKAP2-203ENST00000378037 C1orf185Q5T7R7 199 aa6.88□□□□□ -1.31
CKAP2-203ENST00000378037 ZNF474Q6S9Z5 364 aaPredicted RBP6.88□□□□□ -1.31
CKAP2-203ENST00000378037 ACOT7LQ6ZUV0 252 aa6.88□□□□□ -1.31
CKAP2-203ENST00000378037 NECAP1Q8NC96 275 aa6.88□□□□□ -1.31
CKAP2-203ENST00000378037 REPIN1Q9BWE0 567 aaKnown RBP6.88□□□□□ -1.31
CKAP2-203ENST00000378037 SH3BGRL3Q9H299 93 aa6.88□□□□□ -1.31
CKAP2-203ENST00000378037 OR51I2Q9H344 312 aa6.88□□□□□ -1.31
CKAP2-203ENST00000378037 LIME1Q9H400 295 aa6.88□□□□□ -1.31
CKAP2-203ENST00000378037 GNG13Q9P2W3 67 aa6.88□□□□□ -1.31
CKAP2-203ENST00000378037 HILPDAQ9Y5L2 63 aa6.88□□□□□ -1.31
CKAP2-203ENST00000378037 IGLV3-32A0A0A0MS00 114 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 H3BUI4 141 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 J3QT63 122 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 HBZP02008 142 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 PRDX2P32119 198 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 SNCAP37840 140 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 ERVK-16P61578 105 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 NAAAQ02083 359 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 SLC51BQ86UW2 128 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 PXT1Q8NFP0 134 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 PPP1R35Q8TAP8 253 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 STARD4Q96DR4 205 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 C2orf50Q96LR7 162 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 PRRX2Q99811 253 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 NAA60Q9H7X0 242 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 IGHV2OR16-5A0A0B4J2B6 119 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 SNRPGP15A8MWD9 76 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 LINC01387J3KSC0 135 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 PRF1P14222 555 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 ARSJQ5FYB0 599 aaPredicted RBP6.87□□□□□ -1.31
CKAP2-203ENST00000378037 SLC25A42Q86VD7 318 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 HOGA1Q86XE5 327 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 BAP18Q8IXM2 172 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 OR13A1Q8NGR1 328 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 MITD1Q8WV92 249 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 SSMEM1Q8WWF3 244 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 RBPMSQ93062 196 aaKnown RBP6.87□□□□□ -1.31
CKAP2-203ENST00000378037 ISOC2Q96AB3 205 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 RSG1Q9BU20 258 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 SAV1Q9H4B6 383 aaPredicted RBP6.87□□□□□ -1.31
CKAP2-203ENST00000378037 RGCCQ9H4X1 137 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 RNF122Q9H9V4 155 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 RASL12Q9NYN1 266 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 CISD1Q9NZ45 108 aaKnown RBP6.87□□□□□ -1.31
CKAP2-203ENST00000378037 PIPOXQ9P0Z9 390 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 NDRG3Q9UGV2 375 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 GPR31O00270 319 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 YIF1AO95070 293 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 ZBTB25P24278 435 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 RPL35P42766 123 aaKnown RBP6.87□□□□□ -1.31
CKAP2-203ENST00000378037 FDX2Q6P4F2 183 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 RBMXL3Q8N7X1 1067 aaKnown RBP6.87□□□□□ -1.31
CKAP2-203ENST00000378037 OR5A2Q8NGI9 324 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 OR4A16Q8NH70 328 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 RXFP4Q8TDU9 374 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 ACY3Q96HD9 319 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 MRPL37Q9BZE1 423 aaKnown RBP6.87□□□□□ -1.31
CKAP2-203ENST00000378037 PLEKHF2Q9H8W4 249 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 MLXQ9UH92 298 aa6.87□□□□□ -1.31
CKAP2-203ENST00000378037 ITPR1Q14643 2758 aa6.86□□□□□ -1.31
CKAP2-203ENST00000378037 LRP5LA4QPB2 252 aa6.86□□□□□ -1.31
CKAP2-203ENST00000378037 CLEC18AA5D8T8 446 aa6.86□□□□□ -1.31
CKAP2-203ENST00000378037 REG1AP05451 166 aa6.86□□□□□ -1.31
CKAP2-203ENST00000378037 MYOD1P15172 320 aa6.86□□□□□ -1.31
CKAP2-203ENST00000378037 ACTBL2Q562R1 376 aa6.86□□□□□ -1.31
CKAP2-203ENST00000378037 PDZD11Q5EBL8 140 aa6.86□□□□□ -1.31
CKAP2-203ENST00000378037 STUMQ69YW2 141 aa6.86□□□□□ -1.31
CKAP2-203ENST00000378037 OVCH2Q7RTZ1 564 aa6.86□□□□□ -1.31
CKAP2-203ENST00000378037 CLEC18CQ8NCF0 446 aa6.86□□□□□ -1.31
CKAP2-203ENST00000378037 AKR1E2Q96JD6 320 aa6.86□□□□□ -1.31
CKAP2-203ENST00000378037 FN3KRPQ9HA64 309 aa6.86□□□□□ -1.31
CKAP2-203ENST00000378037 GPR132Q9UNW8 380 aa6.86□□□□□ -1.31
CKAP2-203ENST00000378037 IGHV1-18A0A0C4DH31 117 aa6.86□□□□□ -1.31
CKAP2-203ENST00000378037 TMEM30CPA0ZSE6 113 aa6.86□□□□□ -1.31
CKAP2-203ENST00000378037 SHOXO15266 292 aa6.86□□□□□ -1.31
CKAP2-203ENST00000378037 SNAPC5O75971 98 aa6.86□□□□□ -1.31
CKAP2-203ENST00000378037 DKK1O94907 266 aa6.86□□□□□ -1.31
CKAP2-203ENST00000378037 FBP1P09467 338 aa6.86□□□□□ -1.31
CKAP2-203ENST00000378037 IFI6P09912 130 aa6.86□□□□□ -1.31
CKAP2-203ENST00000378037 MDKP21741 143 aaPredicted RBP6.86□□□□□ -1.31
CKAP2-203ENST00000378037 FGF12P61328 243 aa6.86□□□□□ -1.31
CKAP2-203ENST00000378037 MOB3BQ86TA1 216 aa6.86□□□□□ -1.31
CKAP2-203ENST00000378037 DOLPP1Q86YN1 238 aa6.86□□□□□ -1.31
CKAP2-203ENST00000378037 ZCCHC14Q8WYQ9 949 aaKnown RBP6.86□□□□□ -1.31
CKAP2-203ENST00000378037 ZDHHC16Q969W1 377 aa6.86□□□□□ -1.31
CKAP2-203ENST00000378037 PCGF1Q9BSM1 259 aa6.86□□□□□ -1.31
CKAP2-203ENST00000378037 SLC25A22Q9H936 323 aa6.86□□□□□ -1.31
CKAP2-203ENST00000378037 IGKV3-7A0A075B6H7 116 aa6.86□□□□□ -1.31
CKAP2-203ENST00000378037 CTDSPLO15194 276 aa6.86□□□□□ -1.31
CKAP2-203ENST00000378037 GLAP06280 429 aa6.86□□□□□ -1.31
CKAP2-203ENST00000378037 ARF6P62330 175 aa6.86□□□□□ -1.31
CKAP2-203ENST00000378037 GNB2P62879 340 aa6.86□□□□□ -1.31
CKAP2-203ENST00000378037 PRR31Q5SQ13 230 aa6.86□□□□□ -1.31
CKAP2-203ENST00000378037 EIF5AL1Q6IS14 154 aaKnown RBP6.86□□□□□ -1.31
CKAP2-203ENST00000378037 H3F3CQ6NXT2 135 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms