RNA–Protein interactions for RNA: ENST00000377918.7

PCDH17-201, Transcript of protocadherin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDH17, Length 8,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17-201ENST00000377918 TINAGL1Q9GZM7 467 aaPredicted RBP12.91□□□□□ -0.34
PCDH17-201ENST00000377918 SLIRPQ9GZT3 109 aaKnown RBP12.91□□□□□ -0.34
PCDH17-201ENST00000377918 HYPMO75409 117 aa12.91□□□□□ -0.34
PCDH17-201ENST00000377918 SMAD4Q13485 552 aaKnown RBP12.91□□□□□ -0.34
PCDH17-201ENST00000377918 NEU3Q9UQ49 428 aa12.91□□□□□ -0.34
PCDH17-201ENST00000377918 TMEM45BQ96B21 275 aa12.9□□□□□ -0.34
PCDH17-201ENST00000377918 WIPI2Q9Y4P8 454 aa12.9□□□□□ -0.34
PCDH17-201ENST00000377918 DENND4CQ5VZ89 1909 aa12.9□□□□□ -0.34
PCDH17-201ENST00000377918 SYNGR1O43759 233 aa12.9□□□□□ -0.34
PCDH17-201ENST00000377918 TNFSF15O95150 251 aa12.9□□□□□ -0.34
PCDH17-201ENST00000377918 AVPR2P30518 371 aa12.9□□□□□ -0.34
PCDH17-201ENST00000377918 SNRPD3P62318 126 aaKnown RBP12.9□□□□□ -0.34
PCDH17-201ENST00000377918 ACVR1Q04771 509 aa12.9□□□□□ -0.34
PCDH17-201ENST00000377918 RTP5Q14D33 572 aa12.9□□□□□ -0.34
PCDH17-201ENST00000377918 ZMIZ1Q9ULJ6 1067 aa12.9□□□□□ -0.34
PCDH17-201ENST00000377918 RAB32Q13637 225 aa12.9□□□□□ -0.34
PCDH17-201ENST00000377918 PRNTQ86SH4 94 aa12.9□□□□□ -0.34
PCDH17-201ENST00000377918 SPAG8Q99932 426 aaPredicted RBP12.9□□□□□ -0.34
PCDH17-201ENST00000377918 SF3B5Q9BWJ5 86 aaKnown RBP12.9□□□□□ -0.34
PCDH17-201ENST00000377918 MBD1Q9UIS9 605 aaPredicted RBP12.9□□□□□ -0.34
PCDH17-201ENST00000377918 SRFP11831 508 aa12.9□□□□□ -0.34
PCDH17-201ENST00000377918 KIR3DL3Q8N743 410 aa12.9□□□□□ -0.34
PCDH17-201ENST00000377918 KLK8O60259 260 aa12.9□□□□□ -0.35
PCDH17-201ENST00000377918 SRD5A2P31213 254 aa12.9□□□□□ -0.35
PCDH17-201ENST00000377918 MRPS11P82912 194 aaKnown RBP12.9□□□□□ -0.35
PCDH17-201ENST00000377918 FBXO17Q96EF6 278 aa12.9□□□□□ -0.35
PCDH17-201ENST00000377918 TNFSF18Q9UNG2 199 aa12.9□□□□□ -0.35
PCDH17-201ENST00000377918 A0A1W2PNR3 127 aa12.89□□□□□ -0.35
PCDH17-201ENST00000377918 RNF133Q8WVZ7 376 aa12.89□□□□□ -0.35
PCDH17-201ENST00000377918 A0A1B0GW15 77 aa12.89□□□□□ -0.35
PCDH17-201ENST00000377918 H7C2G1 150 aa12.89□□□□□ -0.35
PCDH17-201ENST00000377918 PPM1DO15297 605 aa12.89□□□□□ -0.35
PCDH17-201ENST00000377918 DLX6P56179 175 aa12.89□□□□□ -0.35
PCDH17-201ENST00000377918 ALKAL1Q6UXT8 129 aa12.89□□□□□ -0.35
PCDH17-201ENST00000377918 LINC00052Q96N35 136 aa12.89□□□□□ -0.35
PCDH17-201ENST00000377918 LOC389332A0A1B0GUA5 103 aa12.89□□□□□ -0.35
PCDH17-201ENST00000377918 NDUFS8O00217 210 aa12.89□□□□□ -0.35
PCDH17-201ENST00000377918 OR10D3Q8NH80 312 aa12.89□□□□□ -0.35
PCDH17-201ENST00000377918 DPH3Q96FX2 82 aa12.89□□□□□ -0.35
PCDH17-201ENST00000377918 TBC1D29Q9UFV1 150 aa12.89□□□□□ -0.35
PCDH17-201ENST00000377918 MEIG1Q5JSS6 88 aa12.89□□□□□ -0.35
PCDH17-201ENST00000377918 IBA57Q5T440 356 aaKnown RBP12.89□□□□□ -0.35
PCDH17-201ENST00000377918 BCDIN3DQ7Z5W3 292 aaKnown RBP12.89□□□□□ -0.35
PCDH17-201ENST00000377918 ZNF683Q8IZ20 524 aa12.89□□□□□ -0.35
PCDH17-201ENST00000377918 MGST2Q99735 147 aa12.89□□□□□ -0.35
PCDH17-201ENST00000377918 GPR35Q9HC97 309 aa12.89□□□□□ -0.35
PCDH17-201ENST00000377918 ANKRD37Q7Z713 158 aa12.88□□□□□ -0.35
PCDH17-201ENST00000377918 RIMKLAQ8IXN7 391 aa12.88□□□□□ -0.35
PCDH17-201ENST00000377918 SHISA5Q8N114 240 aa12.88□□□□□ -0.35
PCDH17-201ENST00000377918 OR5M9Q8NGP3 310 aa12.88□□□□□ -0.35
PCDH17-201ENST00000377918 UBE2FQ969M7 185 aa12.88□□□□□ -0.35
PCDH17-201ENST00000377918 FGF8P55075 233 aaPredicted RBP12.88□□□□□ -0.35
PCDH17-201ENST00000377918 NUDT8Q8WV74 236 aa12.88□□□□□ -0.35
PCDH17-201ENST00000377918 CCL17Q92583 94 aa12.88□□□□□ -0.35
PCDH17-201ENST00000377918 LOXL2Q9Y4K0 774 aa12.88□□□□□ -0.35
PCDH17-201ENST00000377918 A0A0A6YYD5 115 aa12.88□□□□□ -0.35
PCDH17-201ENST00000377918 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.88□□□□□ -0.35
PCDH17-201ENST00000377918 MMP17Q9ULZ9 603 aa12.88□□□□□ -0.35
PCDH17-201ENST00000377918 AUP1Q9Y679 476 aa12.88□□□□□ -0.35
PCDH17-201ENST00000377918 FAM90A26D6RGX4 464 aa12.88□□□□□ -0.35
PCDH17-201ENST00000377918 K7N7A8 449 aa12.88□□□□□ -0.35
PCDH17-201ENST00000377918 DAOP14920 347 aa12.88□□□□□ -0.35
PCDH17-201ENST00000377918 SP6Q3SY56 376 aa12.88□□□□□ -0.35
PCDH17-201ENST00000377918 NUBPLQ8TB37 319 aa12.88□□□□□ -0.35
PCDH17-201ENST00000377918 NDUFA2O43678 99 aa12.88□□□□□ -0.35
PCDH17-201ENST00000377918 SYT11Q9BT88 431 aa12.88□□□□□ -0.35
PCDH17-201ENST00000377918 PLSCR3Q9NRY6 295 aa12.88□□□□□ -0.35
PCDH17-201ENST00000377918 SIGLEC7Q9Y286 467 aa12.88□□□□□ -0.35
PCDH17-201ENST00000377918 RPS4XP62701 263 aaKnown RBP12.88□□□□□ -0.35
PCDH17-201ENST00000377918 ALKBH3Q96Q83 286 aaPredicted RBP12.88□□□□□ -0.35
PCDH17-201ENST00000377918 KCNE1BA0A087WTH5 132 aa12.88□□□□□ -0.35
PCDH17-201ENST00000377918 CXCL13O43927 109 aa12.88□□□□□ -0.35
PCDH17-201ENST00000377918 CRYBB2P43320 205 aa12.88□□□□□ -0.35
PCDH17-201ENST00000377918 CGB2Q6NT52 195 aa12.88□□□□□ -0.35
PCDH17-201ENST00000377918 ANKRD33Q7Z3H0 272 aa12.88□□□□□ -0.35
PCDH17-201ENST00000377918 CADM4Q8NFZ8 388 aa12.88□□□□□ -0.35
PCDH17-201ENST00000377918 CNTD2Q9H8S5 307 aa12.88□□□□□ -0.35
PCDH17-201ENST00000377918 GPR27Q9NS67 375 aa12.88□□□□□ -0.35
PCDH17-201ENST00000377918 OBSL1O75147 1896 aa12.87□□□□□ -0.35
PCDH17-201ENST00000377918 C2orf16Q68DN1 1984 aa12.87□□□□□ -0.35
PCDH17-201ENST00000377918 WTIPA6NIX2 430 aaPredicted RBP12.87□□□□□ -0.35
PCDH17-201ENST00000377918 SPRY1O43609 319 aaPredicted RBP12.87□□□□□ -0.35
PCDH17-201ENST00000377918 CD74P04233 296 aa12.87□□□□□ -0.35
PCDH17-201ENST00000377918 CA6P23280 308 aa12.87□□□□□ -0.35
PCDH17-201ENST00000377918 UCP3P55916 312 aa12.87□□□□□ -0.35
PCDH17-201ENST00000377918 TEX37Q96LM6 180 aa12.87□□□□□ -0.35
PCDH17-201ENST00000377918 TMEM140Q9NV12 185 aa12.87□□□□□ -0.35
PCDH17-201ENST00000377918 J3QR06 171 aa12.87□□□□□ -0.35
PCDH17-201ENST00000377918 PPP6CO00743 305 aa12.87□□□□□ -0.35
PCDH17-201ENST00000377918 C12orf73Q69YU5 71 aa12.87□□□□□ -0.35
PCDH17-201ENST00000377918 LRRC75AQ8NAA5 344 aa12.87□□□□□ -0.35
PCDH17-201ENST00000377918 PPYP01298 95 aa12.87□□□□□ -0.35
PCDH17-201ENST00000377918 HSPB1P04792 205 aaKnown RBP12.87□□□□□ -0.35
PCDH17-201ENST00000377918 BCL2P10415 239 aa12.87□□□□□ -0.35
PCDH17-201ENST00000377918 VWA8A3KMH1 1905 aa12.87□□□□□ -0.35
PCDH17-201ENST00000377918 C7orf77A4D0Y5 90 aa12.87□□□□□ -0.35
PCDH17-201ENST00000377918 ZNF83P51522 516 aa12.87□□□□□ -0.35
PCDH17-201ENST00000377918 HIST1H1AQ02539 215 aaPredicted RBP12.87□□□□□ -0.35
PCDH17-201ENST00000377918 FAAP20Q6NZ36 180 aa12.87□□□□□ -0.35
PCDH17-201ENST00000377918 LDLRAD3Q86YD5 345 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms