RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 IGHV3-72A0A0B4J1Y9 119 aa9.52□□□□□ -0.89
HDAC6-203ENST00000376619 TRIM77I1YAP6 450 aa9.52□□□□□ -0.89
HDAC6-203ENST00000376619 EWSR1Q01844 656 aaKnown RBP eCLIP9.52□□□□□ -0.89
HDAC6-203ENST00000376619 RSPO1Q2MKA7 263 aaPredicted RBP9.52□□□□□ -0.89
HDAC6-203ENST00000376619 PUSL1Q8N0Z8 303 aaKnown RBP9.52□□□□□ -0.89
HDAC6-203ENST00000376619 NIPSNAP3BQ9BS92 247 aa9.52□□□□□ -0.89
HDAC6-203ENST00000376619 SHARPINQ9H0F6 387 aa9.52□□□□□ -0.89
HDAC6-203ENST00000376619 C2CD3Q4AC94 2353 aa9.52□□□□□ -0.89
HDAC6-203ENST00000376619 hCG_1809904A0A1W2PP81 198 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 A0A1W2PR64 198 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 A0A1W2PRV1 198 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 ZNF503-AS2A6NEH8 195 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 RPL36A-HNRNPH2H7BZ11 118 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 ACTL6AO96019 429 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 CTXN2P0C2S0 81 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 SRPXP78539 464 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 PSG7Q13046 419 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 HES1Q14469 280 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 UBAC2Q8NBM4 344 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 WBP1Q96G27 269 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 RIMS4Q9H426 269 aaPredicted RBP9.51□□□□□ -0.89
HDAC6-203ENST00000376619 TMED3Q9Y3Q3 217 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 TMEM30CPA0ZSE6 113 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 LINC01387J3KSC0 135 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 TMEM127O75204 238 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 B3GALNT1O75752 331 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 DEFA4P12838 97 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 ZP3P21754 424 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 ATP6V0CP27449 155 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 NPBWR1P48145 328 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 TNFSF10P50591 281 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 FAM166AQ6J272 317 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 OR4F5Q8NH21 305 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 SSMEM1Q8WWF3 244 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 S100PBPQ96BU1 408 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 TECTBQ96PL2 329 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 OR4F4Q96R69 305 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 CCL13Q99616 98 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 SSX3Q99909 188 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 SCNM1Q9BWG6 230 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 LPAR3Q9UBY5 353 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 PRELID3BQ9Y3B1 194 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 J3QT63 122 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 SELLP14151 372 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 ECI1P42126 302 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 COL10A1Q03692 680 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 SLC25A53Q5H9E4 307 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 RIPPLY2Q5TAB7 128 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 C9orf106Q8NAJ2 232 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 DDA1Q9BW61 102 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 NMES1Q9C002 83 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 ARV1Q9H2C2 271 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 GAB2Q9UQC2 676 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 MPC1Q9Y5U8 109 aa9.51□□□□□ -0.89
HDAC6-203ENST00000376619 MED12LQ86YW9 2145 aa9.5□□□□□ -0.89
HDAC6-203ENST00000376619 A0A1W2PPE2 198 aa9.5□□□□□ -0.89
HDAC6-203ENST00000376619 H7C1Q1 480 aa9.5□□□□□ -0.89
HDAC6-203ENST00000376619 FAM87AP0C7U9 286 aa9.5□□□□□ -0.89
HDAC6-203ENST00000376619 FGF12P61328 243 aa9.5□□□□□ -0.89
HDAC6-203ENST00000376619 TLE4Q04727 773 aa9.5□□□□□ -0.89
HDAC6-203ENST00000376619 ZNF787Q6DD87 383 aa9.5□□□□□ -0.89
HDAC6-203ENST00000376619 RPRMLQ8N4K4 120 aa9.5□□□□□ -0.89
HDAC6-203ENST00000376619 OR10P1Q8NGE3 313 aa9.5□□□□□ -0.89
HDAC6-203ENST00000376619 OR2V2Q96R30 315 aa9.5□□□□□ -0.89
HDAC6-203ENST00000376619 FOXD3Q9UJU5 478 aaPredicted RBP9.5□□□□□ -0.89
HDAC6-203ENST00000376619 OR2W1Q9Y3N9 320 aa9.5□□□□□ -0.89
HDAC6-203ENST00000376619 OR5B21A6NL26 309 aa9.5□□□□□ -0.89
HDAC6-203ENST00000376619 ZNF727A8MUV8 499 aa9.5□□□□□ -0.89
HDAC6-203ENST00000376619 SHOXO15266 292 aa9.5□□□□□ -0.89
HDAC6-203ENST00000376619 TMEM11P17152 192 aa9.5□□□□□ -0.89
HDAC6-203ENST00000376619 SUPT4H1P63272 117 aaKnown RBP9.5□□□□□ -0.89
HDAC6-203ENST00000376619 TNFAIP6P98066 277 aaPredicted RBP9.5□□□□□ -0.89
HDAC6-203ENST00000376619 RARRES2Q99969 163 aa9.5□□□□□ -0.89
HDAC6-203ENST00000376619 RNF126Q9BV68 326 aa9.5□□□□□ -0.89
HDAC6-203ENST00000376619 KIAA1324LA8MWY0 1029 aaPredicted RBP9.5□□□□□ -0.89
HDAC6-203ENST00000376619 OR2C1O95371 312 aa9.5□□□□□ -0.89
HDAC6-203ENST00000376619 VDAC1P21796 283 aa9.5□□□□□ -0.89
HDAC6-203ENST00000376619 KLF3P57682 345 aaPredicted RBP9.5□□□□□ -0.89
HDAC6-203ENST00000376619 HIST2H3AQ71DI3 136 aa9.5□□□□□ -0.89
HDAC6-203ENST00000376619 BHLHA15Q7RTS1 189 aaPredicted RBP9.5□□□□□ -0.89
HDAC6-203ENST00000376619 MRPS24Q96EL2 167 aaKnown RBP9.5□□□□□ -0.89
HDAC6-203ENST00000376619 ACY3Q96HD9 319 aa9.5□□□□□ -0.89
HDAC6-203ENST00000376619 HKR1P10072 659 aa9.49□□□□□ -0.89
HDAC6-203ENST00000376619 NQO2P16083 231 aa9.49□□□□□ -0.89
HDAC6-203ENST00000376619 IGHV1-2P23083 117 aa9.49□□□□□ -0.89
HDAC6-203ENST00000376619 ITLN1Q8WWA0 313 aa9.49□□□□□ -0.89
HDAC6-203ENST00000376619 S1PR3Q99500 378 aa9.49□□□□□ -0.89
HDAC6-203ENST00000376619 PATZ1Q9HBE1 687 aaKnown RBP9.49□□□□□ -0.89
HDAC6-203ENST00000376619 MED9Q9NWA0 146 aa9.49□□□□□ -0.89
HDAC6-203ENST00000376619 DOK5Q9P104 306 aa9.49□□□□□ -0.89
HDAC6-203ENST00000376619 NPIPB13A6NJU9 1138 aa9.49□□□□□ -0.89
HDAC6-203ENST00000376619 ZNF891A8MT65 544 aaPredicted RBP9.49□□□□□ -0.89
HDAC6-203ENST00000376619 NPIPB4C9JG80 1138 aa9.49□□□□□ -0.89
HDAC6-203ENST00000376619 CYB5R3P00387 301 aaPredicted RBP9.49□□□□□ -0.89
HDAC6-203ENST00000376619 COX7A1P24310 79 aa9.49□□□□□ -0.89
HDAC6-203ENST00000376619 SLC2A8Q9NY64 477 aa9.49□□□□□ -0.89
HDAC6-203ENST00000376619 SEMA5BQ9P283 1151 aa9.49□□□□□ -0.89
HDAC6-203ENST00000376619 LOC400499M0QZD8 3231 aa9.49□□□□□ -0.89
HDAC6-203ENST00000376619 SYNGR2O43760 224 aa9.49□□□□□ -0.89
HDAC6-203ENST00000376619 GYPAP02724 150 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms