RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 OR1L4Q8NGR5 311 aa11.77□□□□□ -0.53
C9orf47-203ENST00000375851 PRDM14Q9GZV8 571 aa11.77□□□□□ -0.53
C9orf47-203ENST00000375851 NPDC1Q9NQX5 325 aaPredicted RBP11.77□□□□□ -0.53
C9orf47-203ENST00000375851 KCNAB3O43448 404 aa11.77□□□□□ -0.53
C9orf47-203ENST00000375851 SEC11BP0C7V7 166 aa11.77□□□□□ -0.53
C9orf47-203ENST00000375851 CXCL2P19875 107 aa11.77□□□□□ -0.53
C9orf47-203ENST00000375851 GNG4P50150 75 aa11.77□□□□□ -0.53
C9orf47-203ENST00000375851 RNF212Q495C1 297 aa11.77□□□□□ -0.53
C9orf47-203ENST00000375851 ASCL5Q7RTU5 278 aa11.77□□□□□ -0.53
C9orf47-203ENST00000375851 HEXA-AS1Q9H8Q6 139 aa11.77□□□□□ -0.53
C9orf47-203ENST00000375851 FAM90A10PA6NDY2 464 aa11.76□□□□□ -0.53
C9orf47-203ENST00000375851 FAM90A18PA6NE21 464 aa11.76□□□□□ -0.53
C9orf47-203ENST00000375851 FAM90A16PA6NEW6 464 aa11.76□□□□□ -0.53
C9orf47-203ENST00000375851 FAM90A20PA6NIJ5 464 aa11.76□□□□□ -0.53
C9orf47-203ENST00000375851 FAM90A8PA6NJQ4 464 aa11.76□□□□□ -0.53
C9orf47-203ENST00000375851 FAM90A7PA6NKC0 464 aa11.76□□□□□ -0.53
C9orf47-203ENST00000375851 FAM90A22PA8MWA6 464 aa11.76□□□□□ -0.53
C9orf47-203ENST00000375851 FAM90A12PA8MX19 464 aa11.76□□□□□ -0.53
C9orf47-203ENST00000375851 FAM90A5PA8MXJ8 464 aa11.76□□□□□ -0.53
C9orf47-203ENST00000375851 FAM90A23PA8MXZ1 464 aa11.76□□□□□ -0.53
C9orf47-203ENST00000375851 HSBP1O75506 76 aa11.76□□□□□ -0.53
C9orf47-203ENST00000375851 HBZP02008 142 aa11.76□□□□□ -0.53
C9orf47-203ENST00000375851 FAM90A15PP0C7V4 464 aa11.76□□□□□ -0.53
C9orf47-203ENST00000375851 FAM90A13PP0C7W8 464 aa11.76□□□□□ -0.53
C9orf47-203ENST00000375851 FAM90A14PP0C7W9 464 aa11.76□□□□□ -0.53
C9orf47-203ENST00000375851 FAM90A24PP0C7X0 464 aa11.76□□□□□ -0.53
C9orf47-203ENST00000375851 FAM78BQ5VT40 261 aa11.76□□□□□ -0.53
C9orf47-203ENST00000375851 SSX8Q7RTT4 187 aa11.76□□□□□ -0.53
C9orf47-203ENST00000375851 MYPOPQ86VE0 399 aaPredicted RBP11.76□□□□□ -0.53
C9orf47-203ENST00000375851 CCL13Q99616 98 aa11.76□□□□□ -0.53
C9orf47-203ENST00000375851 SLC25A10Q9UBX3 287 aaPredicted RBP11.76□□□□□ -0.53
C9orf47-203ENST00000375851 RALGAPA1Q6GYQ0 2036 aa11.76□□□□□ -0.53
C9orf47-203ENST00000375851 LINC00862A6NCI5 91 aa11.76□□□□□ -0.53
C9orf47-203ENST00000375851 COX5BP10606 129 aa11.76□□□□□ -0.53
C9orf47-203ENST00000375851 ATP6V0CP27449 155 aa11.76□□□□□ -0.53
C9orf47-203ENST00000375851 UBE2L3P68036 154 aaKnown RBP11.76□□□□□ -0.53
C9orf47-203ENST00000375851 KIF26BQ2KJY2 2108 aa11.76□□□□□ -0.53
C9orf47-203ENST00000375851 SPINK4O60575 86 aa11.76□□□□□ -0.53
C9orf47-203ENST00000375851 BRS3P32247 399 aa11.76□□□□□ -0.53
C9orf47-203ENST00000375851 MPV17P39210 176 aa11.76□□□□□ -0.53
C9orf47-203ENST00000375851 GALR1P47211 349 aa11.76□□□□□ -0.53
C9orf47-203ENST00000375851 NHLH2Q02577 135 aa11.76□□□□□ -0.53
C9orf47-203ENST00000375851 FAM162BQ5T6X4 162 aa11.76□□□□□ -0.53
C9orf47-203ENST00000375851 LINC00114Q6XXX2 140 aa11.76□□□□□ -0.53
C9orf47-203ENST00000375851 OR52L2PQ8NGH6 319 aa11.76□□□□□ -0.53
C9orf47-203ENST00000375851 ITLN1Q8WWA0 313 aa11.76□□□□□ -0.53
C9orf47-203ENST00000375851 TIMP4Q99727 224 aa11.76□□□□□ -0.53
C9orf47-203ENST00000375851 HSF4Q9ULV5 492 aa11.76□□□□□ -0.53
C9orf47-203ENST00000375851 NYNRINQ9P2P1 1898 aaKnown RBP11.76□□□□□ -0.53
C9orf47-203ENST00000375851 LRRC3CA6NJW4 275 aa11.76□□□□□ -0.53
C9orf47-203ENST00000375851 NPY1RP25929 384 aa11.76□□□□□ -0.53
C9orf47-203ENST00000375851 C12orf57Q99622 126 aa11.76□□□□□ -0.53
C9orf47-203ENST00000375851 TRAPPC1Q9Y5R8 145 aa11.76□□□□□ -0.53
C9orf47-203ENST00000375851 IGKV1D-43A0A0B4J1Z2 117 aa11.75□□□□□ -0.53
C9orf47-203ENST00000375851 TMEM14DPA8MWL7 114 aa11.75□□□□□ -0.53
C9orf47-203ENST00000375851 LYZP61626 148 aa11.75□□□□□ -0.53
C9orf47-203ENST00000375851 BSXQ3C1V8 233 aa11.75□□□□□ -0.53
C9orf47-203ENST00000375851 MARS2Q96GW9 593 aaKnown RBP11.75□□□□□ -0.53
C9orf47-203ENST00000375851 FAM210BQ96KR6 192 aa11.75□□□□□ -0.53
C9orf47-203ENST00000375851 IMMP1LQ96LU5 166 aa11.75□□□□□ -0.53
C9orf47-203ENST00000375851 SIGLEC12Q96PQ1 595 aa11.75□□□□□ -0.53
C9orf47-203ENST00000375851 DLL3Q9NYJ7 618 aa11.75□□□□□ -0.53
C9orf47-203ENST00000375851 P2RY4P51582 365 aa11.75□□□□□ -0.53
C9orf47-203ENST00000375851 STPG2Q8N412 459 aa11.75□□□□□ -0.53
C9orf47-203ENST00000375851 FDCSPQ8NFU4 85 aa11.75□□□□□ -0.53
C9orf47-203ENST00000375851 OR8G5Q8NG78 346 aa11.75□□□□□ -0.53
C9orf47-203ENST00000375851 OR10A7Q8NGE5 316 aa11.75□□□□□ -0.53
C9orf47-203ENST00000375851 PKIBQ9C010 78 aa11.75□□□□□ -0.53
C9orf47-203ENST00000375851 TECRQ9NZ01 308 aaKnown RBP11.75□□□□□ -0.53
C9orf47-203ENST00000375851 OR5AC2Q9NZP5 309 aa11.75□□□□□ -0.53
C9orf47-203ENST00000375851 RCC1P18754 421 aaPredicted RBP11.75□□□□□ -0.53
C9orf47-203ENST00000375851 S100A4P26447 101 aaKnown RBP11.75□□□□□ -0.53
C9orf47-203ENST00000375851 REG1BP48304 166 aa11.75□□□□□ -0.53
C9orf47-203ENST00000375851 AWAT1Q58HT5 328 aa11.75□□□□□ -0.53
C9orf47-203ENST00000375851 MRPL14Q6P1L8 145 aaKnown RBP11.75□□□□□ -0.53
C9orf47-203ENST00000375851 ABHD14BQ96IU4 210 aa11.75□□□□□ -0.53
C9orf47-203ENST00000375851 Q96M66 194 aa11.75□□□□□ -0.53
C9orf47-203ENST00000375851 UBTD1Q9HAC8 227 aa11.75□□□□□ -0.53
C9orf47-203ENST00000375851 ARG1P05089 322 aa11.75□□□□□ -0.53
C9orf47-203ENST00000375851 RGP1Q92546 391 aaPredicted RBP11.75□□□□□ -0.53
C9orf47-203ENST00000375851 TMEM54Q969K7 222 aa11.75□□□□□ -0.53
C9orf47-203ENST00000375851 NAT8BQ9UHF3 227 aa11.75□□□□□ -0.53
C9orf47-203ENST00000375851 PNRC1Q12796 327 aaPredicted RBP11.74□□□□□ -0.53
C9orf47-203ENST00000375851 ZNF658BQ4V348 819 aaPredicted RBP11.74□□□□□ -0.53
C9orf47-203ENST00000375851 SPNS3Q6ZMD2 512 aa11.74□□□□□ -0.53
C9orf47-203ENST00000375851 ABHD14AQ9BUJ0 271 aa11.74□□□□□ -0.53
C9orf47-203ENST00000375851 TMEM167BQ9NRX6 74 aa11.74□□□□□ -0.53
C9orf47-203ENST00000375851 IGLV3-12A0A075B6K2 115 aa11.74□□□□□ -0.53
C9orf47-203ENST00000375851 J3QR06 171 aa11.74□□□□□ -0.53
C9orf47-203ENST00000375851 RAB29O14966 203 aa11.74□□□□□ -0.53
C9orf47-203ENST00000375851 CELA3AP09093 270 aa11.74□□□□□ -0.53
C9orf47-203ENST00000375851 CTSSP25774 331 aa11.74□□□□□ -0.53
C9orf47-203ENST00000375851 C19orf48Q6RUI8 117 aa11.74□□□□□ -0.53
C9orf47-203ENST00000375851 TMEM252Q8N6L7 170 aa11.74□□□□□ -0.53
C9orf47-203ENST00000375851 OR4P4Q8NGL7 312 aa11.74□□□□□ -0.53
C9orf47-203ENST00000375851 OR1L8Q8NGR8 309 aa11.74□□□□□ -0.53
C9orf47-203ENST00000375851 KLF14Q8TD94 323 aaPredicted RBP11.74□□□□□ -0.53
C9orf47-203ENST00000375851 TMEM222Q9H0R3 208 aa11.74□□□□□ -0.53
C9orf47-203ENST00000375851 C1RLQ9NZP8 487 aa11.74□□□□□ -0.53
C9orf47-203ENST00000375851 RLFQ13129 1914 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms