RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 ARPC1BO15143 372 aaKnown RBP9.02□□□□□ -0.97
HLA-DQA1-202ENST00000374949 SIGLEC5O15389 551 aa9.02□□□□□ -0.97
HLA-DQA1-202ENST00000374949 FABP7O15540 132 aa9.02□□□□□ -0.97
HLA-DQA1-202ENST00000374949 SCTP09683 121 aa9.02□□□□□ -0.97
HLA-DQA1-202ENST00000374949 RCC1P18754 421 aaPredicted RBP9.02□□□□□ -0.97
HLA-DQA1-202ENST00000374949 ERP29P30040 261 aaKnown RBP9.02□□□□□ -0.97
HLA-DQA1-202ENST00000374949 GLIPR1P48060 266 aa9.02□□□□□ -0.97
HLA-DQA1-202ENST00000374949 RAB25P57735 213 aa9.02□□□□□ -0.97
HLA-DQA1-202ENST00000374949 SEC61A1P61619 476 aaKnown RBP9.02□□□□□ -0.97
HLA-DQA1-202ENST00000374949 HLA-DRB3P79483 266 aa9.02□□□□□ -0.97
HLA-DQA1-202ENST00000374949 C6orf183Q5T699 404 aa9.02□□□□□ -0.97
HLA-DQA1-202ENST00000374949 DCAF12L2Q5VW00 463 aa9.02□□□□□ -0.97
HLA-DQA1-202ENST00000374949 TRAT1Q6PIZ9 186 aa9.02□□□□□ -0.97
HLA-DQA1-202ENST00000374949 SLC36A1Q7Z2H8 476 aa9.02□□□□□ -0.97
HLA-DQA1-202ENST00000374949 TEX29Q8N6K0 151 aa9.02□□□□□ -0.97
HLA-DQA1-202ENST00000374949 OR4A4PQ8NGN8 299 aa9.02□□□□□ -0.97
HLA-DQA1-202ENST00000374949 GIMAP1Q8WWP7 306 aa9.02□□□□□ -0.97
HLA-DQA1-202ENST00000374949 RAB39BQ96DA2 213 aa9.02□□□□□ -0.97
HLA-DQA1-202ENST00000374949 COQ2Q96H96 371 aa9.02□□□□□ -0.97
HLA-DQA1-202ENST00000374949 SCGB3A2Q96PL1 93 aa9.02□□□□□ -0.97
HLA-DQA1-202ENST00000374949 ZNF747Q9BV97 191 aa9.02□□□□□ -0.97
HLA-DQA1-202ENST00000374949 C20orf85Q9H1P6 137 aa9.02□□□□□ -0.97
HLA-DQA1-202ENST00000374949 MBNL3Q9NUK0 354 aaKnown RBP9.02□□□□□ -0.97
HLA-DQA1-202ENST00000374949 KIF25Q9UIL4 384 aa9.02□□□□□ -0.97
HLA-DQA1-202ENST00000374949 FLVCR2Q9UPI3 526 aa9.02□□□□□ -0.97
HLA-DQA1-202ENST00000374949 TRAV39A0A0B4J263 110 aa9.01□□□□□ -0.97
HLA-DQA1-202ENST00000374949 PEX14O75381 377 aa9.01□□□□□ -0.97
HLA-DQA1-202ENST00000374949 IGHV2-5P01817 119 aa9.01□□□□□ -0.97
HLA-DQA1-202ENST00000374949 RLN1P04808 185 aa9.01□□□□□ -0.97
HLA-DQA1-202ENST00000374949 GZMHP20718 246 aa9.01□□□□□ -0.97
HLA-DQA1-202ENST00000374949 FCGR2CP31995 323 aa9.01□□□□□ -0.97
HLA-DQA1-202ENST00000374949 ECI1P42126 302 aa9.01□□□□□ -0.97
HLA-DQA1-202ENST00000374949 GLP1RP43220 463 aa9.01□□□□□ -0.97
HLA-DQA1-202ENST00000374949 BCAP31P51572 246 aa9.01□□□□□ -0.97
HLA-DQA1-202ENST00000374949 MECP2P51608 486 aaKnown RBP9.01□□□□□ -0.97
HLA-DQA1-202ENST00000374949 PDLIM3Q53GG5 364 aaPredicted RBP9.01□□□□□ -0.97
HLA-DQA1-202ENST00000374949 IGSF11Q5DX21 431 aa9.01□□□□□ -0.97
HLA-DQA1-202ENST00000374949 ZNF565Q8N9K5 539 aa9.01□□□□□ -0.97
HLA-DQA1-202ENST00000374949 TMEM185AQ8NFB2 350 aa9.01□□□□□ -0.97
HLA-DQA1-202ENST00000374949 OR13C8Q8NGS7 320 aa9.01□□□□□ -0.97
HLA-DQA1-202ENST00000374949 NANPQ8TBE9 248 aa9.01□□□□□ -0.97
HLA-DQA1-202ENST00000374949 RAB1CQ92928 201 aa9.01□□□□□ -0.97
HLA-DQA1-202ENST00000374949 TIMD4Q96H15 378 aa9.01□□□□□ -0.97
HLA-DQA1-202ENST00000374949 DUX5Q96PT3 197 aa9.01□□□□□ -0.97
HLA-DQA1-202ENST00000374949 TMEM246Q9BRR3 403 aa9.01□□□□□ -0.97
HLA-DQA1-202ENST00000374949 ZNF2Q9BSG1 426 aaPredicted RBP9.01□□□□□ -0.97
HLA-DQA1-202ENST00000374949 KAAG1Q9UBP8 84 aa9.01□□□□□ -0.97
HLA-DQA1-202ENST00000374949 OPN4Q9UHM6 478 aa9.01□□□□□ -0.97
HLA-DQA1-202ENST00000374949 TRRAPQ9Y4A5 3859 aa9.01□□□□□ -0.97
HLA-DQA1-202ENST00000374949 TANC2Q9HCD6 1990 aa9.01□□□□□ -0.97
HLA-DQA1-202ENST00000374949 ODAMA1E959 279 aa9□□□□□ -0.97
HLA-DQA1-202ENST00000374949 J3QLI3 93 aa9□□□□□ -0.97
HLA-DQA1-202ENST00000374949 BET1O15155 118 aa9□□□□□ -0.97
HLA-DQA1-202ENST00000374949 ADAM20O43506 726 aa9□□□□□ -0.97
HLA-DQA1-202ENST00000374949 NDUFB3O43676 98 aa9□□□□□ -0.97
HLA-DQA1-202ENST00000374949 PRAF2O60831 178 aa9□□□□□ -0.97
HLA-DQA1-202ENST00000374949 DIRAS3O95661 229 aa9□□□□□ -0.97
HLA-DQA1-202ENST00000374949 FSHBP01225 129 aa9□□□□□ -0.97
HLA-DQA1-202ENST00000374949 IGHV2-70P01814 119 aa9□□□□□ -0.97
HLA-DQA1-202ENST00000374949 IL5P05113 134 aa9□□□□□ -0.97
HLA-DQA1-202ENST00000374949 NPY4RP50391 375 aa9□□□□□ -0.97
HLA-DQA1-202ENST00000374949 P2RX3P56373 397 aa9□□□□□ -0.97
HLA-DQA1-202ENST00000374949 DEFA6Q01524 100 aa9□□□□□ -0.97
HLA-DQA1-202ENST00000374949 EDDM3AQ14507 147 aa9□□□□□ -0.97
HLA-DQA1-202ENST00000374949 HMGN3Q15651 99 aa9□□□□□ -0.97
HLA-DQA1-202ENST00000374949 TATDN3Q17R31 274 aa9□□□□□ -0.97
HLA-DQA1-202ENST00000374949 ZNF660Q6AZW8 331 aaPredicted RBP9□□□□□ -0.97
HLA-DQA1-202ENST00000374949 SHISA2Q6UWI4 295 aa9□□□□□ -0.97
HLA-DQA1-202ENST00000374949 LYPD2Q6UXB3 125 aa9□□□□□ -0.97
HLA-DQA1-202ENST00000374949 C5orf24Q7Z6I8 188 aa9□□□□□ -0.97
HLA-DQA1-202ENST00000374949 ZNF554Q86TJ5 538 aa9□□□□□ -0.97
HLA-DQA1-202ENST00000374949 LHFPL1Q86WI0 220 aa9□□□□□ -0.97
HLA-DQA1-202ENST00000374949 CADM3Q8N126 398 aa9□□□□□ -0.97
HLA-DQA1-202ENST00000374949 MUC20Q8N307 709 aaPredicted RBP9□□□□□ -0.97
HLA-DQA1-202ENST00000374949 FAM216BQ8N7L0 139 aa9□□□□□ -0.97
HLA-DQA1-202ENST00000374949 OR10J5Q8NHC4 309 aa9□□□□□ -0.97
HLA-DQA1-202ENST00000374949 MARCH1Q8TCQ1 289 aa9□□□□□ -0.97
HLA-DQA1-202ENST00000374949 ALX4Q9H161 411 aaPredicted RBP9□□□□□ -0.97
HLA-DQA1-202ENST00000374949 C7orf69Q9H7B7 122 aa9□□□□□ -0.97
HLA-DQA1-202ENST00000374949 TAF9BQ9HBM6 251 aa9□□□□□ -0.97
HLA-DQA1-202ENST00000374949 OR6C3Q9NZP0 311 aa9□□□□□ -0.97
HLA-DQA1-202ENST00000374949 GPR132Q9UNW8 380 aa9□□□□□ -0.97
HLA-DQA1-202ENST00000374949 NOTCH1P46531 2555 aa8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 TRBV6-7A0A0A0MS04 114 aa8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 IGKV1-6A0A0C4DH72 117 aa8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 A0A1B0GW55 424 aa8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 FAM172BPA6NC97 362 aa8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 DNAJC9-AS1A6NH13 148 aa8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 OR5H14A6NHG9 310 aa8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 CEACAM18A8MTB9 384 aa8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 C12orf77C9JDV5 145 aa8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 SPINT2O43291 252 aa8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 DUX4L2P0CJ85 424 aa8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 DUX4L3P0CJ86 424 aa8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 DUX4L4P0CJ87 422 aa8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 DUX4L5P0CJ88 424 aa8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 DUX4L6P0CJ89 424 aa8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 DUX4L7P0CJ90 424 aa8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 HKR1P10072 659 aa8.99□□□□□ -0.97
HLA-DQA1-202ENST00000374949 SELLP14151 372 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms