RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 NDC1Q9BTX1 674 aa6.75□□□□□ -1.33
USP48-203ENST00000374732 EXO1Q9UQ84 846 aaKnown RBP6.75□□□□□ -1.33
USP48-203ENST00000374732 MRPS17Q9Y2R5 130 aaKnown RBP6.75□□□□□ -1.33
USP48-203ENST00000374732 TRBV9A0A0B4J1U6 114 aa6.75□□□□□ -1.33
USP48-203ENST00000374732 PLPP2O43688 288 aa6.75□□□□□ -1.33
USP48-203ENST00000374732 CSN2P05814 226 aa6.75□□□□□ -1.33
USP48-203ENST00000374732 NHLRC4P0CG21 123 aaPredicted RBP6.75□□□□□ -1.33
USP48-203ENST00000374732 MYBPHQ13203 477 aa6.75□□□□□ -1.33
USP48-203ENST00000374732 MFAP5Q13361 173 aa6.75□□□□□ -1.33
USP48-203ENST00000374732 ZNF57Q68EA5 555 aaPredicted RBP6.75□□□□□ -1.33
USP48-203ENST00000374732 CYP2R1Q6VVX0 501 aa6.75□□□□□ -1.33
USP48-203ENST00000374732 VN1R2Q8NFZ6 395 aa6.75□□□□□ -1.33
USP48-203ENST00000374732 PSMF1Q92530 271 aa6.75□□□□□ -1.33
USP48-203ENST00000374732 C20orf173Q96LM9 149 aa6.75□□□□□ -1.33
USP48-203ENST00000374732 TCEAL2Q9H3H9 227 aaPredicted RBP6.75□□□□□ -1.33
USP48-203ENST00000374732 UQCR10Q9UDW1 63 aa6.75□□□□□ -1.33
USP48-203ENST00000374732 PLXNA4Q9HCM2 1894 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 ATP6V0CP27449 155 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 MPGP29372 298 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 KIAA0040Q15053 153 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 MOB1AQ9H8S9 216 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 SLC25A19Q9HC21 320 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 CYSLTR1Q9Y271 337 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 FXYD6-FXYD2A0A087WZ82 144 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 TAX1BP3O14907 124 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 CRYGDP07320 174 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 PRSS56P0CW18 603 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 HTR1EP28566 365 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 SRIP30626 198 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 CRYBB2P43320 205 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 PFN3P60673 137 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 ENDOGQ14249 297 aaKnown RBP6.74□□□□□ -1.33
USP48-203ENST00000374732 OR1J1Q8NGS3 322 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 MS4A10Q96PG2 267 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 OR2H1Q9GZK4 316 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 FXYD6Q9H0Q3 95 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 ZDHHC11Q9H8X9 412 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 ACOT13Q9NPJ3 140 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 ATG2AQ2TAZ0 1938 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 SRCAPQ6ZRS2 3230 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 ANAPC1Q9H1A4 1944 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 A0A0A6YYD5 115 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 TCRBV3S1A0A5B6 114 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 LRRC3CA6NJW4 275 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 LRRC30A6NM36 301 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 TRAF3IP2O43734 574 aaPredicted RBP6.74□□□□□ -1.33
USP48-203ENST00000374732 ATP5LO75964 103 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 AIFM1O95831 613 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 HLA-DQB1P01920 261 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 PDX1P52945 283 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 TAS2R20P59543 309 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 RPS24P62847 133 aaKnown RBP6.74□□□□□ -1.33
USP48-203ENST00000374732 SLC35A2P78381 396 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 RUNX3Q13761 415 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 ZSWIM7Q19AV6 140 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 MEIG1Q5JSS6 88 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 GLYATL3Q5SZD4 288 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 ANKRD16Q6P6B7 361 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 LINC01561Q8N1V8 128 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 OR1J4Q8NGS1 313 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 HMGCLL1Q8TB92 370 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 OR5P3Q8WZ94 311 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 VN1R3Q9BXE9 311 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 PBX4Q9BYU1 374 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 CISD1Q9NZ45 108 aaKnown RBP6.74□□□□□ -1.33
USP48-203ENST00000374732 DNAJC27Q9NZQ0 273 aa6.74□□□□□ -1.33
USP48-203ENST00000374732 TNRC6AQ8NDV7 1962 aaKnown RBP6.73□□□□□ -1.33
USP48-203ENST00000374732 MTCL1Q9Y4B5 1905 aaKnown RBP6.73□□□□□ -1.33
USP48-203ENST00000374732 KMT2EQ8IZD2 1858 aa6.73□□□□□ -1.33
USP48-203ENST00000374732 DUXBA0A1W2PPF3 345 aa6.73□□□□□ -1.33
USP48-203ENST00000374732 DAPL1A0PJW8 107 aa6.73□□□□□ -1.33
USP48-203ENST00000374732 C5orf67F2Z3F1 127 aa6.73□□□□□ -1.33
USP48-203ENST00000374732 RAMP1O60894 148 aa6.73□□□□□ -1.33
USP48-203ENST00000374732 NUDT3O95989 172 aa6.73□□□□□ -1.33
USP48-203ENST00000374732 GPX3P22352 226 aa6.73□□□□□ -1.33
USP48-203ENST00000374732 HIST3H3Q16695 136 aa6.73□□□□□ -1.33
USP48-203ENST00000374732 ZNF709Q8N972 641 aa6.73□□□□□ -1.33
USP48-203ENST00000374732 OR52R1Q8NGF1 315 aa6.73□□□□□ -1.33
USP48-203ENST00000374732 SYNPRQ8TBG9 265 aa6.73□□□□□ -1.33
USP48-203ENST00000374732 RAB39BQ96DA2 213 aa6.73□□□□□ -1.33
USP48-203ENST00000374732 IL21Q9HBE4 155 aa6.73□□□□□ -1.33
USP48-203ENST00000374732 TNFRSF12AQ9NP84 129 aa6.73□□□□□ -1.33
USP48-203ENST00000374732 DNAJC15Q9Y5T4 150 aa6.73□□□□□ -1.33
USP48-203ENST00000374732 HS3ST3B1Q9Y662 390 aa6.73□□□□□ -1.33
USP48-203ENST00000374732 PDE4DIPQ5VU43 2346 aa6.73□□□□□ -1.33
USP48-203ENST00000374732 ZNF106Q9H2Y7 1883 aaKnown RBP6.73□□□□□ -1.33
USP48-203ENST00000374732 HMSDA8MTL9 139 aa6.73□□□□□ -1.33
USP48-203ENST00000374732 GABRPO00591 440 aa6.73□□□□□ -1.33
USP48-203ENST00000374732 CCL22O00626 93 aa6.73□□□□□ -1.33
USP48-203ENST00000374732 LDB3O75112 727 aa6.73□□□□□ -1.33
USP48-203ENST00000374732 TBX6O95947 436 aaPredicted RBP6.73□□□□□ -1.33
USP48-203ENST00000374732 PGA4P0DJD7 388 aa6.73□□□□□ -1.33
USP48-203ENST00000374732 PGA5P0DJD9 388 aa6.73□□□□□ -1.33
USP48-203ENST00000374732 ZNF728P0DKX0 622 aa6.73□□□□□ -1.33
USP48-203ENST00000374732 VPREB1P12018 145 aa6.73□□□□□ -1.33
USP48-203ENST00000374732 ORM2P19652 201 aa6.73□□□□□ -1.33
USP48-203ENST00000374732 SNCAP37840 140 aa6.73□□□□□ -1.33
USP48-203ENST00000374732 GUCA1AP43080 201 aaPredicted RBP6.73□□□□□ -1.33
USP48-203ENST00000374732 ZFP36L2P47974 494 aaKnown RBP6.73□□□□□ -1.33
USP48-203ENST00000374732 FABP6P51161 128 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms