RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 DCAF16Q9NXF7 216 aa14.11□□□□□ -0.15
PTPN20-203ENST00000374342 UBQLN2Q9UHD9 624 aa14.11□□□□□ -0.15
PTPN20-203ENST00000374342 COL6A6A6NMZ7 2263 aa14.11□□□□□ -0.15
PTPN20-203ENST00000374342 KANTRA0A1W2PQU2 76 aa14.1□□□□□ -0.15
PTPN20-203ENST00000374342 ODAMA1E959 279 aa14.1□□□□□ -0.15
PTPN20-203ENST00000374342 PGLYRP1O75594 196 aaPredicted RBP14.1□□□□□ -0.15
PTPN20-203ENST00000374342 HEXAP06865 529 aa14.1□□□□□ -0.15
PTPN20-203ENST00000374342 OR8U9P0C7N5 309 aa14.1□□□□□ -0.15
PTPN20-203ENST00000374342 SELLP14151 372 aa14.1□□□□□ -0.15
PTPN20-203ENST00000374342 PAX5Q02548 391 aa14.1□□□□□ -0.15
PTPN20-203ENST00000374342 IL15RAQ13261 267 aa14.1□□□□□ -0.15
PTPN20-203ENST00000374342 STUMQ69YW2 141 aa14.1□□□□□ -0.15
PTPN20-203ENST00000374342 OR8H3Q8N146 312 aa14.1□□□□□ -0.15
PTPN20-203ENST00000374342 OR8U1Q8NH10 309 aa14.1□□□□□ -0.15
PTPN20-203ENST00000374342 OR51H1Q8NH63 302 aa14.1□□□□□ -0.15
PTPN20-203ENST00000374342 LILRB1Q8NHL6 650 aaPredicted RBP14.1□□□□□ -0.15
PTPN20-203ENST00000374342 NINJ1Q92982 152 aa14.1□□□□□ -0.15
PTPN20-203ENST00000374342 SAP30LQ9HAJ7 183 aa14.1□□□□□ -0.15
PTPN20-203ENST00000374342 KCNJ16Q9NPI9 418 aa14.1□□□□□ -0.15
PTPN20-203ENST00000374342 MAB21L2Q9Y586 359 aa14.1□□□□□ -0.15
PTPN20-203ENST00000374342 H0Y980 276 aa14.09□□□□□ -0.15
PTPN20-203ENST00000374342 BCL2L11O43521 198 aa14.09□□□□□ -0.15
PTPN20-203ENST00000374342 EDDM3BP56851 147 aa14.09□□□□□ -0.15
PTPN20-203ENST00000374342 FAM53AQ6NSI3 398 aaPredicted RBP14.09□□□□□ -0.15
PTPN20-203ENST00000374342 TRAT1Q6PIZ9 186 aa14.09□□□□□ -0.15
PTPN20-203ENST00000374342 ZNF695Q8IW36 515 aa14.09□□□□□ -0.15
PTPN20-203ENST00000374342 ARL11Q969Q4 196 aa14.09□□□□□ -0.15
PTPN20-203ENST00000374342 LURAP1Q96LR2 239 aa14.09□□□□□ -0.15
PTPN20-203ENST00000374342 RNF115Q9Y4L5 304 aa14.09□□□□□ -0.15
PTPN20-203ENST00000374342 DSCAML1Q8TD84 2053 aa14.09□□□□□ -0.15
PTPN20-203ENST00000374342 IGHV3-43A0A0B4J1X8 118 aa14.09□□□□□ -0.15
PTPN20-203ENST00000374342 A0A1B0GW55 424 aa14.09□□□□□ -0.15
PTPN20-203ENST00000374342 LRRC30A6NM36 301 aa14.09□□□□□ -0.15
PTPN20-203ENST00000374342 K7N7A8 449 aa14.09□□□□□ -0.15
PTPN20-203ENST00000374342 PLAUP00749 431 aa14.09□□□□□ -0.15
PTPN20-203ENST00000374342 DUX4L2P0CJ85 424 aa14.09□□□□□ -0.15
PTPN20-203ENST00000374342 DUX4L3P0CJ86 424 aa14.09□□□□□ -0.15
PTPN20-203ENST00000374342 DUX4L4P0CJ87 422 aa14.09□□□□□ -0.15
PTPN20-203ENST00000374342 DUX4L5P0CJ88 424 aa14.09□□□□□ -0.15
PTPN20-203ENST00000374342 DUX4L6P0CJ89 424 aa14.09□□□□□ -0.15
PTPN20-203ENST00000374342 DUX4L7P0CJ90 424 aa14.09□□□□□ -0.15
PTPN20-203ENST00000374342 IGHV3-43DP0DP04 118 aa14.09□□□□□ -0.15
PTPN20-203ENST00000374342 DUX4L9Q6RFH8 374 aaPredicted RBP14.09□□□□□ -0.15
PTPN20-203ENST00000374342 OR1S1Q8NH92 325 aa14.09□□□□□ -0.15
PTPN20-203ENST00000374342 RRNAD1Q96FB5 475 aaKnown RBP14.09□□□□□ -0.15
PTPN20-203ENST00000374342 TMEM56Q96MV1 263 aa14.09□□□□□ -0.15
PTPN20-203ENST00000374342 EGLN1Q9GZT9 426 aa14.09□□□□□ -0.15
PTPN20-203ENST00000374342 DUX4Q9UBX2 424 aa14.09□□□□□ -0.15
PTPN20-203ENST00000374342 TMED3Q9Y3Q3 217 aa14.09□□□□□ -0.15
PTPN20-203ENST00000374342 LSM5Q9Y4Y9 91 aaKnown RBP14.09□□□□□ -0.15
PTPN20-203ENST00000374342 TMEM56-RWDD3S4R434 201 aa14.09□□□□□ -0.15
PTPN20-203ENST00000374342 HCFC1P51610 2035 aa14.08□□□□□ -0.15
PTPN20-203ENST00000374342 SPINT2O43291 252 aa14.08□□□□□ -0.16
PTPN20-203ENST00000374342 SPDEFO95238 335 aa14.08□□□□□ -0.16
PTPN20-203ENST00000374342 IGLV2-14P01704 120 aa14.08□□□□□ -0.16
PTPN20-203ENST00000374342 GYPAP02724 150 aa14.08□□□□□ -0.16
PTPN20-203ENST00000374342 LYL1P12980 280 aa14.08□□□□□ -0.16
PTPN20-203ENST00000374342 F2RP25116 425 aa14.08□□□□□ -0.16
PTPN20-203ENST00000374342 UCP1P25874 307 aa14.08□□□□□ -0.16
PTPN20-203ENST00000374342 PPP1CCP36873 323 aaKnown RBP14.08□□□□□ -0.16
PTPN20-203ENST00000374342 P2RX3P56373 397 aa14.08□□□□□ -0.16
PTPN20-203ENST00000374342 FAM209AQ5JX71 171 aa14.08□□□□□ -0.16
PTPN20-203ENST00000374342 ZNF561Q8N587 486 aa14.08□□□□□ -0.16
PTPN20-203ENST00000374342 RFESDQ8TAC1 157 aa14.08□□□□□ -0.16
PTPN20-203ENST00000374342 GAFA1Q96PS6 74 aa14.08□□□□□ -0.16
PTPN20-203ENST00000374342 DIDO1Q9BTC0 2240 aaKnown RBP14.08□□□□□ -0.16
PTPN20-203ENST00000374342 ADGRG4Q8IZF6 3080 aa14.08□□□□□ -0.16
PTPN20-203ENST00000374342 TUBAL3A6NHL2 446 aa14.07□□□□□ -0.16
PTPN20-203ENST00000374342 SIAH2O43255 324 aa14.07□□□□□ -0.16
PTPN20-203ENST00000374342 SMCO1Q147U7 214 aa14.07□□□□□ -0.16
PTPN20-203ENST00000374342 LTC4SQ16873 150 aa14.07□□□□□ -0.16
PTPN20-203ENST00000374342 SLC51BQ86UW2 128 aa14.07□□□□□ -0.16
PTPN20-203ENST00000374342 SELENOHQ8IZQ5 122 aaKnown RBP14.07□□□□□ -0.16
PTPN20-203ENST00000374342 OR5D13Q8NGL4 314 aa14.07□□□□□ -0.16
PTPN20-203ENST00000374342 SDSLQ96GA7 329 aa14.07□□□□□ -0.16
PTPN20-203ENST00000374342 CNTNAP3BQ96NU0 1288 aa14.07□□□□□ -0.16
PTPN20-203ENST00000374342 CNTNAP3Q9BZ76 1288 aa14.07□□□□□ -0.16
PTPN20-203ENST00000374342 OR2D2Q9H210 308 aa14.07□□□□□ -0.16
PTPN20-203ENST00000374342 OR2S2Q9NQN1 319 aa14.07□□□□□ -0.16
PTPN20-203ENST00000374342 PKD1L2Q7Z442 2459 aa14.07□□□□□ -0.16
PTPN20-203ENST00000374342 C15orf65H3BRN8 121 aa14.07□□□□□ -0.16
PTPN20-203ENST00000374342 APOBEC3AP31941 199 aaPredicted RBP14.07□□□□□ -0.16
PTPN20-203ENST00000374342 NUP62P37198 522 aaPredicted RBP14.07□□□□□ -0.16
PTPN20-203ENST00000374342 UBA52P62987 128 aaKnown RBP14.07□□□□□ -0.16
PTPN20-203ENST00000374342 DRAM1Q8N682 238 aa14.07□□□□□ -0.16
PTPN20-203ENST00000374342 FAM216BQ8N7L0 139 aa14.07□□□□□ -0.16
PTPN20-203ENST00000374342 OR52M1Q8NGK5 317 aa14.07□□□□□ -0.16
PTPN20-203ENST00000374342 PCNPQ8WW12 178 aaKnown RBP14.07□□□□□ -0.16
PTPN20-203ENST00000374342 RBPMSQ93062 196 aaKnown RBP14.07□□□□□ -0.16
PTPN20-203ENST00000374342 AKR1E2Q96JD6 320 aa14.07□□□□□ -0.16
PTPN20-203ENST00000374342 CCL13Q99616 98 aa14.07□□□□□ -0.16
PTPN20-203ENST00000374342 RNF150Q9ULK6 438 aa14.07□□□□□ -0.16
PTPN20-203ENST00000374342 ROS1P08922 2347 aa14.06□□□□□ -0.16
PTPN20-203ENST00000374342 NBASA2RRP1 2371 aa14.06□□□□□ -0.16
PTPN20-203ENST00000374342 KALRNO60229 2985 aa14.06□□□□□ -0.16
PTPN20-203ENST00000374342 MSGN1A6NI15 193 aa14.06□□□□□ -0.16
PTPN20-203ENST00000374342 CDS2O95674 445 aa14.06□□□□□ -0.16
PTPN20-203ENST00000374342 MUC1P15941 1255 aaPredicted RBP14.06□□□□□ -0.16
PTPN20-203ENST00000374342 ZNF16P17020 682 aaPredicted RBP14.06□□□□□ -0.16
PTPN20-203ENST00000374342 TEX36Q5VZQ5 186 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms