RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 HLA-DQB1P01920 261 aa12.41□□□□□ -0.42
LMX1B-202ENST00000373474 TMEM136Q6ZRR5 245 aa12.41□□□□□ -0.42
LMX1B-202ENST00000373474 COPS9Q8WXC6 57 aa12.41□□□□□ -0.42
LMX1B-202ENST00000373474 FAM131CQ96AQ9 280 aa12.41□□□□□ -0.42
LMX1B-202ENST00000373474 TXNDC17Q9BRA2 123 aa12.41□□□□□ -0.42
LMX1B-202ENST00000373474 SLC26A1Q9H2B4 701 aa12.41□□□□□ -0.42
LMX1B-202ENST00000373474 DXOO77932 396 aaKnown RBP12.41□□□□□ -0.42
LMX1B-202ENST00000373474 ACTL6AO96019 429 aa12.41□□□□□ -0.42
LMX1B-202ENST00000373474 TMEM50BP56557 158 aa12.41□□□□□ -0.42
LMX1B-202ENST00000373474 KLF3P57682 345 aaPredicted RBP12.41□□□□□ -0.42
LMX1B-202ENST00000373474 DNLZQ5SXM8 178 aa12.41□□□□□ -0.42
LMX1B-202ENST00000373474 MARVELD3Q96A59 401 aa12.41□□□□□ -0.42
LMX1B-202ENST00000373474 OR2W1Q9Y3N9 320 aa12.41□□□□□ -0.42
LMX1B-202ENST00000373474 A0A1B0GU03 582 aa12.4□□□□□ -0.42
LMX1B-202ENST00000373474 BCL2P10415 239 aa12.4□□□□□ -0.42
LMX1B-202ENST00000373474 UQCRFS1P47985 274 aa12.4□□□□□ -0.42
LMX1B-202ENST00000373474 DCAF12L2Q5VW00 463 aa12.4□□□□□ -0.42
LMX1B-202ENST00000373474 GFRALQ6UXV0 394 aa12.4□□□□□ -0.42
LMX1B-202ENST00000373474 TUSC5Q8IXB3 177 aa12.4□□□□□ -0.42
LMX1B-202ENST00000373474 WFDC6Q9BQY6 131 aa12.4□□□□□ -0.42
LMX1B-202ENST00000373474 TMEM70Q9BUB7 260 aa12.4□□□□□ -0.42
LMX1B-202ENST00000373474 FAM206AQ9NX38 181 aa12.4□□□□□ -0.42
LMX1B-202ENST00000373474 ONECUT1Q9UBC0 465 aa12.4□□□□□ -0.42
LMX1B-202ENST00000373474 CD74P04233 296 aa12.4□□□□□ -0.42
LMX1B-202ENST00000373474 LIFP15018 202 aa12.4□□□□□ -0.42
LMX1B-202ENST00000373474 TNFAIP6P98066 277 aaPredicted RBP12.4□□□□□ -0.42
LMX1B-202ENST00000373474 GAMTQ14353 236 aa12.4□□□□□ -0.42
LMX1B-202ENST00000373474 RGP1Q92546 391 aaPredicted RBP12.4□□□□□ -0.42
LMX1B-202ENST00000373474 TRGV8A0A0C4DH27 118 aa12.4□□□□□ -0.42
LMX1B-202ENST00000373474 A0A1W2PQF6 199 aa12.4□□□□□ -0.42
LMX1B-202ENST00000373474 CXorf65A6NEN9 183 aa12.4□□□□□ -0.42
LMX1B-202ENST00000373474 PNLIPP16233 465 aa12.4□□□□□ -0.42
LMX1B-202ENST00000373474 KIR2DL2P43627 348 aaPredicted RBP12.4□□□□□ -0.42
LMX1B-202ENST00000373474 LAIR2Q6ISS4 152 aa12.4□□□□□ -0.42
LMX1B-202ENST00000373474 SP7Q8TDD2 431 aaPredicted RBP12.4□□□□□ -0.42
LMX1B-202ENST00000373474 MBD3L1Q8WWY6 194 aa12.4□□□□□ -0.42
LMX1B-202ENST00000373474 RHOVQ96L33 236 aa12.4□□□□□ -0.42
LMX1B-202ENST00000373474 PQLC2LA1A4F0 135 aa12.4□□□□□ -0.42
LMX1B-202ENST00000373474 K7ESF4 209 aa12.4□□□□□ -0.42
LMX1B-202ENST00000373474 CCL3P10147 92 aa12.4□□□□□ -0.42
LMX1B-202ENST00000373474 CDX1P47902 265 aaPredicted RBP12.4□□□□□ -0.42
LMX1B-202ENST00000373474 FBXO17Q96EF6 278 aa12.4□□□□□ -0.42
LMX1B-202ENST00000373474 IGHV5-10-1A0A0J9YXX1 117 aa12.39□□□□□ -0.43
LMX1B-202ENST00000373474 hADV38S2A0JD32 116 aa12.39□□□□□ -0.43
LMX1B-202ENST00000373474 MMP9P14780 707 aa12.39□□□□□ -0.43
LMX1B-202ENST00000373474 MPLP40238 635 aa12.39□□□□□ -0.43
LMX1B-202ENST00000373474 VAX1Q5SQQ9 334 aa12.39□□□□□ -0.43
LMX1B-202ENST00000373474 RPEQ96AT9 228 aa12.39□□□□□ -0.43
LMX1B-202ENST00000373474 CDX2Q99626 313 aaPredicted RBP12.39□□□□□ -0.43
LMX1B-202ENST00000373474 WBP1LQ9NX94 342 aa12.39□□□□□ -0.43
LMX1B-202ENST00000373474 TCFL5Q9UL49 500 aa12.39□□□□□ -0.43
LMX1B-202ENST00000373474 GAPDHP04406 335 aaKnown RBP12.39□□□□□ -0.43
LMX1B-202ENST00000373474 TGIF2LYQ8IUE0 185 aa12.39□□□□□ -0.43
LMX1B-202ENST00000373474 LRRC75AQ8NAA5 344 aa12.39□□□□□ -0.43
LMX1B-202ENST00000373474 IFI6P09912 130 aa12.39□□□□□ -0.43
LMX1B-202ENST00000373474 AKIRIN1Q9H9L7 192 aaPredicted RBP12.39□□□□□ -0.43
LMX1B-202ENST00000373474 HSPB1P04792 205 aaKnown RBP12.39□□□□□ -0.43
LMX1B-202ENST00000373474 TAS2R60P59551 318 aa12.39□□□□□ -0.43
LMX1B-202ENST00000373474 SERF2P84101 59 aa12.39□□□□□ -0.43
LMX1B-202ENST00000373474 HFEQ30201 348 aa12.39□□□□□ -0.43
LMX1B-202ENST00000373474 SGMS2Q8NHU3 365 aa12.39□□□□□ -0.43
LMX1B-202ENST00000373474 UCN2Q96RP3 112 aa12.39□□□□□ -0.43
LMX1B-202ENST00000373474 TMEM140Q9NV12 185 aa12.39□□□□□ -0.43
LMX1B-202ENST00000373474 CLEC5AQ9NY25 188 aa12.39□□□□□ -0.43
LMX1B-202ENST00000373474 SF3B6Q9Y3B4 125 aaKnown RBP12.39□□□□□ -0.43
LMX1B-202ENST00000373474 PARP14Q460N5 1801 aa12.39□□□□□ -0.43
LMX1B-202ENST00000373474 HLA-DQA1P01909 254 aa12.39□□□□□ -0.43
LMX1B-202ENST00000373474 PRRX1P54821 245 aa12.39□□□□□ -0.43
LMX1B-202ENST00000373474 C10orf113Q5VZT2 155 aa12.39□□□□□ -0.43
LMX1B-202ENST00000373474 SNRNP40Q96DI7 357 aaKnown RBP12.39□□□□□ -0.43
LMX1B-202ENST00000373474 NPBWR2P48146 333 aa12.38□□□□□ -0.43
LMX1B-202ENST00000373474 RBPMS2Q6ZRY4 209 aaKnown RBP12.38□□□□□ -0.43
LMX1B-202ENST00000373474 FAM181AQ8N9Y4 354 aa12.38□□□□□ -0.43
LMX1B-202ENST00000373474 MIEN1Q9BRT3 115 aa12.38□□□□□ -0.43
LMX1B-202ENST00000373474 MUC1P15941 1255 aaPredicted RBP12.38□□□□□ -0.43
LMX1B-202ENST00000373474 BHLHA15Q7RTS1 189 aaPredicted RBP12.38□□□□□ -0.43
LMX1B-202ENST00000373474 ZBTB34Q8NCN2 500 aa12.38□□□□□ -0.43
LMX1B-202ENST00000373474 OR10S1Q8NGN2 331 aa12.38□□□□□ -0.43
LMX1B-202ENST00000373474 WDR54Q9H977 334 aa12.38□□□□□ -0.43
LMX1B-202ENST00000373474 TRGC2P03986 189 aa12.38□□□□□ -0.43
LMX1B-202ENST00000373474 GBGT1Q8N5D6 347 aa12.38□□□□□ -0.43
LMX1B-202ENST00000373474 PEF1Q9UBV8 284 aaKnown RBP12.38□□□□□ -0.43
LMX1B-202ENST00000373474 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.38□□□□□ -0.43
LMX1B-202ENST00000373474 IL11P20809 199 aa12.38□□□□□ -0.43
LMX1B-202ENST00000373474 CD1BP29016 333 aa12.38□□□□□ -0.43
LMX1B-202ENST00000373474 GAB4Q2WGN9 574 aa12.38□□□□□ -0.43
LMX1B-202ENST00000373474 RBM14Q96PK6 669 aaKnown RBP12.38□□□□□ -0.43
LMX1B-202ENST00000373474 VCX2Q9H322 139 aa12.38□□□□□ -0.43
LMX1B-202ENST00000373474 IL19Q9UHD0 177 aa12.38□□□□□ -0.43
LMX1B-202ENST00000373474 A0A1B0GV90 55 aa12.37□□□□□ -0.43
LMX1B-202ENST00000373474 IGHV4-34P06331 123 aa12.37□□□□□ -0.43
LMX1B-202ENST00000373474 MAGEA5P43359 124 aa12.37□□□□□ -0.43
LMX1B-202ENST00000373474 IFITM2Q01629 132 aa12.37□□□□□ -0.43
LMX1B-202ENST00000373474 TWIST1Q15672 202 aa12.37□□□□□ -0.43
LMX1B-202ENST00000373474 FAM219AQ8IW50 185 aa12.37□□□□□ -0.43
LMX1B-202ENST00000373474 OR2I1PQ8NGU4 316 aa12.37□□□□□ -0.43
LMX1B-202ENST00000373474 HDHD3Q9BSH5 251 aaPredicted RBP12.37□□□□□ -0.43
LMX1B-202ENST00000373474 FSCN3Q9NQT6 498 aa12.37□□□□□ -0.43
LMX1B-202ENST00000373474 PTPRFP10586 1907 aa12.37□□□□□ -0.43
LMX1B-202ENST00000373474 MEX3AA1L020 520 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms