RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 NPY1RP25929 384 aa12.72□□□□□ -0.37
NDC1-201ENST00000371429 MRPL24Q96A35 216 aaKnown RBP12.72□□□□□ -0.37
NDC1-201ENST00000371429 PLSCR3Q9NRY6 295 aa12.72□□□□□ -0.37
NDC1-201ENST00000371429 PPIAL4CA0A0B4J2A2 164 aa12.71□□□□□ -0.37
NDC1-201ENST00000371429 TMEM229AB2RXF0 380 aa12.71□□□□□ -0.37
NDC1-201ENST00000371429 TGFBR3LH3BV60 316 aa12.71□□□□□ -0.37
NDC1-201ENST00000371429 PPIAL4GP0DN37 164 aa12.71□□□□□ -0.37
NDC1-201ENST00000371429 GUK1Q16774 197 aa12.71□□□□□ -0.37
NDC1-201ENST00000371429 SLC25A42Q86VD7 318 aa12.71□□□□□ -0.37
NDC1-201ENST00000371429 PDPNQ86YL7 162 aa12.71□□□□□ -0.37
NDC1-201ENST00000371429 PARP11Q9NR21 331 aa12.71□□□□□ -0.37
NDC1-201ENST00000371429 WSB1Q9Y6I7 421 aa12.71□□□□□ -0.37
NDC1-201ENST00000371429 EGR4Q05215 589 aa12.71□□□□□ -0.37
NDC1-201ENST00000371429 SSMEM1Q8WWF3 244 aa12.71□□□□□ -0.37
NDC1-201ENST00000371429 LINC00470Q9BZP3 86 aa12.71□□□□□ -0.37
NDC1-201ENST00000371429 MIXL1Q9H2W2 232 aa12.71□□□□□ -0.37
NDC1-201ENST00000371429 SCN2AQ99250 2005 aa12.71□□□□□ -0.38
NDC1-201ENST00000371429 ODAMA1E959 279 aa12.71□□□□□ -0.38
NDC1-201ENST00000371429 APOBEC3AP31941 199 aaPredicted RBP12.71□□□□□ -0.38
NDC1-201ENST00000371429 DYNLT3P51808 116 aa12.71□□□□□ -0.38
NDC1-201ENST00000371429 SLC35B1P78383 322 aa12.71□□□□□ -0.38
NDC1-201ENST00000371429 FAM209AQ5JX71 171 aa12.71□□□□□ -0.38
NDC1-201ENST00000371429 BVESQ8NE79 360 aa12.71□□□□□ -0.38
NDC1-201ENST00000371429 TECRQ9NZ01 308 aaKnown RBP12.71□□□□□ -0.38
NDC1-201ENST00000371429 CDS2O95674 445 aa12.71□□□□□ -0.38
NDC1-201ENST00000371429 FAM162BQ5T6X4 162 aa12.71□□□□□ -0.38
NDC1-201ENST00000371429 LYZL2Q7Z4W2 148 aa12.71□□□□□ -0.38
NDC1-201ENST00000371429 SPACA3Q8IXA5 215 aa12.71□□□□□ -0.38
NDC1-201ENST00000371429 GAR1Q9NY12 217 aaKnown RBP12.71□□□□□ -0.38
NDC1-201ENST00000371429 IGLV3-12A0A075B6K2 115 aa12.7□□□□□ -0.38
NDC1-201ENST00000371429 OR2J3O76001 311 aa12.7□□□□□ -0.38
NDC1-201ENST00000371429 HLA-GP17693 338 aa12.7□□□□□ -0.38
NDC1-201ENST00000371429 ABHD14BQ96IU4 210 aa12.7□□□□□ -0.38
NDC1-201ENST00000371429 MMP24Q9Y5R2 645 aa12.7□□□□□ -0.38
NDC1-201ENST00000371429 NKX2-6A6NCS4 301 aa12.7□□□□□ -0.38
NDC1-201ENST00000371429 NPIPB13A6NJU9 1138 aa12.7□□□□□ -0.38
NDC1-201ENST00000371429 NPIPB4C9JG80 1138 aa12.7□□□□□ -0.38
NDC1-201ENST00000371429 ISG15P05161 165 aa12.7□□□□□ -0.38
NDC1-201ENST00000371429 GLRXP35754 106 aa12.7□□□□□ -0.38
NDC1-201ENST00000371429 RPL27AP46776 148 aaKnown RBP12.7□□□□□ -0.38
NDC1-201ENST00000371429 C10orf128Q5T292 105 aa12.7□□□□□ -0.38
NDC1-201ENST00000371429 ZDHHC11Q9H8X9 412 aa12.7□□□□□ -0.38
NDC1-201ENST00000371429 PITPNC1Q9UKF7 332 aa12.7□□□□□ -0.38
NDC1-201ENST00000371429 TUBGCP6Q96RT7 1819 aa12.7□□□□□ -0.38
NDC1-201ENST00000371429 RAMP1O60894 148 aa12.7□□□□□ -0.38
NDC1-201ENST00000371429 HPRT1P00492 218 aa12.7□□□□□ -0.38
NDC1-201ENST00000371429 PF4V1P10720 104 aa12.7□□□□□ -0.38
NDC1-201ENST00000371429 P2RY1P47900 373 aa12.7□□□□□ -0.38
NDC1-201ENST00000371429 CEBPDP49716 269 aaPredicted RBP12.7□□□□□ -0.38
NDC1-201ENST00000371429 GNG4P50150 75 aa12.7□□□□□ -0.38
NDC1-201ENST00000371429 ACSF3Q4G176 576 aaPredicted RBP12.7□□□□□ -0.38
NDC1-201ENST00000371429 FAM78BQ5VT40 261 aa12.7□□□□□ -0.38
NDC1-201ENST00000371429 RBM38Q9H0Z9 239 aaKnown RBP12.7□□□□□ -0.38
NDC1-201ENST00000371429 A0A0G2JMM0 328 aa12.7□□□□□ -0.38
NDC1-201ENST00000371429 A0A1B0GU03 582 aa12.7□□□□□ -0.38
NDC1-201ENST00000371429 A0A1W2PPB8 328 aa12.7□□□□□ -0.38
NDC1-201ENST00000371429 A0A1W2PRS3 328 aa12.7□□□□□ -0.38
NDC1-201ENST00000371429 MED19A0JLT2 244 aaPredicted RBP12.7□□□□□ -0.38
NDC1-201ENST00000371429 KIR3DP1A8MWS1 328 aa12.7□□□□□ -0.38
NDC1-201ENST00000371429 TRIM77I1YAP6 450 aa12.7□□□□□ -0.38
NDC1-201ENST00000371429 MMP7P09237 267 aaPredicted RBP12.7□□□□□ -0.38
NDC1-201ENST00000371429 DHRS7BQ6IAN0 325 aaPredicted RBP12.7□□□□□ -0.38
NDC1-201ENST00000371429 TMEM45BQ96B21 275 aa12.7□□□□□ -0.38
NDC1-201ENST00000371429 P2RX4Q99571 388 aa12.7□□□□□ -0.38
NDC1-201ENST00000371429 SIRT7Q9NRC8 400 aa12.7□□□□□ -0.38
NDC1-201ENST00000371429 OR51B2Q9Y5P1 312 aa12.7□□□□□ -0.38
NDC1-201ENST00000371429 KIF13BQ9NQT8 1826 aa12.69□□□□□ -0.38
NDC1-201ENST00000371429 ZIC3O60481 467 aa12.69□□□□□ -0.38
NDC1-201ENST00000371429 HTR1DP28221 377 aa12.69□□□□□ -0.38
NDC1-201ENST00000371429 LOC105371242A0A075B767 164 aa12.69□□□□□ -0.38
NDC1-201ENST00000371429 ZNF716A6NP11 495 aa12.69□□□□□ -0.38
NDC1-201ENST00000371429 ZNF737O75373 536 aa12.69□□□□□ -0.38
NDC1-201ENST00000371429 ZNF708P17019 499 aa12.69□□□□□ -0.38
NDC1-201ENST00000371429 ZNF429Q86V71 674 aa12.69□□□□□ -0.38
NDC1-201ENST00000371429 OR4X1Q8NH49 305 aa12.69□□□□□ -0.38
NDC1-201ENST00000371429 TMEM167BQ9NRX6 74 aa12.69□□□□□ -0.38
NDC1-201ENST00000371429 ZFC3H1O60293 1989 aaKnown RBP12.69□□□□□ -0.38
NDC1-201ENST00000371429 CCDC88CQ9P219 2028 aa12.69□□□□□ -0.38
NDC1-201ENST00000371429 IGHV3-21A0A0B4J1V1 117 aa12.69□□□□□ -0.38
NDC1-201ENST00000371429 TRBV5-5A0A0J9YX44 114 aa12.69□□□□□ -0.38
NDC1-201ENST00000371429 DHRS7CA6NNS2 312 aa12.69□□□□□ -0.38
NDC1-201ENST00000371429 LEUTXA8MZ59 168 aa12.69□□□□□ -0.38
NDC1-201ENST00000371429 RNASEK-C17orf49H0YIS7 233 aa12.69□□□□□ -0.38
NDC1-201ENST00000371429 J3QW42 95 aa12.69□□□□□ -0.38
NDC1-201ENST00000371429 LOXL3P58215 753 aa12.69□□□□□ -0.38
NDC1-201ENST00000371429 MYPOPQ86VE0 399 aaPredicted RBP12.69□□□□□ -0.38
NDC1-201ENST00000371429 LPAR5Q9H1C0 372 aa12.69□□□□□ -0.38
NDC1-201ENST00000371429 FAM206AQ9NX38 181 aa12.69□□□□□ -0.38
NDC1-201ENST00000371429 ZNF154Q13106 437 aa12.69□□□□□ -0.38
NDC1-201ENST00000371429 IGSF11Q5DX21 431 aa12.69□□□□□ -0.38
NDC1-201ENST00000371429 WFDC3Q8IUB2 231 aa12.69□□□□□ -0.38
NDC1-201ENST00000371429 TMEM54Q969K7 222 aa12.69□□□□□ -0.38
NDC1-201ENST00000371429 CALYQ9NYX4 217 aa12.69□□□□□ -0.38
NDC1-201ENST00000371429 V9GYH0 126 aa12.69□□□□□ -0.38
NDC1-201ENST00000371429 FAM90A10PA6NDY2 464 aa12.68□□□□□ -0.38
NDC1-201ENST00000371429 FAM90A18PA6NE21 464 aa12.68□□□□□ -0.38
NDC1-201ENST00000371429 FAM90A16PA6NEW6 464 aa12.68□□□□□ -0.38
NDC1-201ENST00000371429 FAM90A20PA6NIJ5 464 aa12.68□□□□□ -0.38
NDC1-201ENST00000371429 FAM90A8PA6NJQ4 464 aa12.68□□□□□ -0.38
NDC1-201ENST00000371429 FAM90A7PA6NKC0 464 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms