RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 GAR1Q9NY12 217 aaKnown RBP5.95□□□□□ -1.46
USP1-202ENST00000371146 RCC2Q9P258 522 aaKnown RBP5.95□□□□□ -1.46
USP1-202ENST00000371146 R4GMQ9 66 aa5.95□□□□□ -1.46
USP1-202ENST00000371146 TRAV40A0A0B4J280 105 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 FABP12A6NFH5 140 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 PRR32B1ATL7 298 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 NPBWR2P48146 333 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 SELENOTP62341 195 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 ZNF154Q13106 437 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 ARL6IP1Q15041 203 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 ATP6V1FQ16864 119 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 CR1LQ2VPA4 569 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 DUX4L9Q6RFH8 374 aaPredicted RBP5.94□□□□□ -1.46
USP1-202ENST00000371146 UBAC2Q8NBM4 344 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 OR8G5Q8NG78 346 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 OR8B3Q8NGG8 313 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 OR10S1Q8NGN2 331 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 NINJ1Q92982 152 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 OR8B2Q96RD0 313 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 LINC00470Q9BZP3 86 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 DUSP21Q9H596 190 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 OR5V1Q9UGF6 321 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 ST3GAL6Q9Y274 331 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 C7orf66A4D0T2 115 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 IFNA21P01568 189 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 SNRPCP09234 159 aaKnown RBP5.94□□□□□ -1.46
USP1-202ENST00000371146 NQO2P16083 231 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 HOXB6P17509 224 aaKnown RBP5.94□□□□□ -1.46
USP1-202ENST00000371146 BLVRBP30043 206 aaPredicted RBP5.94□□□□□ -1.46
USP1-202ENST00000371146 ZNF79Q15937 498 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 GUK1Q16774 197 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 TM4SF20Q53R12 229 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 PLAC9Q5JTB6 97 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 LINC01590Q5TEZ4 76 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 LYPD2Q6UXB3 125 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 CATSPERDQ86XM0 798 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 LRRC75AQ8NAA5 344 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 TMEM56Q96MV1 263 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 SLC25A32Q9H2D1 315 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 MMP26Q9NRE1 261 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 FRRS1LQ9P0K9 344 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 MRPS28Q9Y2Q9 187 aaKnown RBP5.94□□□□□ -1.46
USP1-202ENST00000371146 EXOSC1Q9Y3B2 195 aaKnown RBP5.94□□□□□ -1.46
USP1-202ENST00000371146 TMEM56-RWDD3S4R434 201 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 PLA2G10O15496 165 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 TTRP02766 147 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 HLA-GP17693 338 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 RAB40BQ12829 278 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 GPR157Q5UAW9 335 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 ZNF691Q5VV52 312 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 C20orf204Q6ZNR8 217 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 DOK3Q7L591 496 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 ADGRE4PQ86SQ3 457 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 ZNF573Q86YE8 665 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 CSNK2A3Q8NEV1 391 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 TERB2Q8NHR7 220 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 TOMM40LQ969M1 308 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 NABP1Q96AH0 204 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 DIRC2Q96SL1 478 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 C1QTNF5Q9BXJ0 243 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 MED28Q9H204 178 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 TMEM140Q9NV12 185 aa5.94□□□□□ -1.46
USP1-202ENST00000371146 WIPF3A6NGB9 483 aa5.93□□□□□ -1.46
USP1-202ENST00000371146 NCBP2LA6PVI3 153 aaKnown RBP5.93□□□□□ -1.46
USP1-202ENST00000371146 TCF21O43680 179 aa5.93□□□□□ -1.46
USP1-202ENST00000371146 CA11O75493 328 aa5.93□□□□□ -1.46
USP1-202ENST00000371146 MT-ND4LP03901 98 aa5.93□□□□□ -1.46
USP1-202ENST00000371146 SFTPBP07988 381 aa5.93□□□□□ -1.46
USP1-202ENST00000371146 IFI6P09912 130 aa5.93□□□□□ -1.46
USP1-202ENST00000371146 CCL3L1P16619 93 aa5.93□□□□□ -1.46
USP1-202ENST00000371146 ZNF14P17017 642 aaPredicted RBP5.93□□□□□ -1.46
USP1-202ENST00000371146 COX5AP20674 150 aa5.93□□□□□ -1.46
USP1-202ENST00000371146 OR10A3P58181 314 aa5.93□□□□□ -1.46
USP1-202ENST00000371146 ISL1P61371 349 aa5.93□□□□□ -1.46
USP1-202ENST00000371146 RPL31P62899 125 aaKnown RBP5.93□□□□□ -1.46
USP1-202ENST00000371146 FAM3AP98173 230 aa5.93□□□□□ -1.46
USP1-202ENST00000371146 PSG3Q16557 428 aa5.93□□□□□ -1.46
USP1-202ENST00000371146 PIGYQ3MUY2 71 aa5.93□□□□□ -1.46
USP1-202ENST00000371146 SCGB2B2Q4G0G5 96 aa5.93□□□□□ -1.46
USP1-202ENST00000371146 GLT8D1Q68CQ7 371 aa5.93□□□□□ -1.46
USP1-202ENST00000371146 C1QL4Q86Z23 238 aa5.93□□□□□ -1.46
USP1-202ENST00000371146 C18orf12Q96KH6 178 aa5.93□□□□□ -1.46
USP1-202ENST00000371146 CLCC1Q96S66 551 aa5.93□□□□□ -1.46
USP1-202ENST00000371146 PSG11Q9UQ72 335 aa5.93□□□□□ -1.46
USP1-202ENST00000371146 NPTNQ9Y639 398 aa5.93□□□□□ -1.46
USP1-202ENST00000371146 TRAV38-1A0A0B4J264 116 aa5.93□□□□□ -1.46
USP1-202ENST00000371146 MMP7P09237 267 aaPredicted RBP5.93□□□□□ -1.46
USP1-202ENST00000371146 SNRPBP14678 240 aaKnown RBP5.93□□□□□ -1.46
USP1-202ENST00000371146 SRD5A1P18405 259 aa5.93□□□□□ -1.46
USP1-202ENST00000371146 SDC2P34741 201 aa5.93□□□□□ -1.46
USP1-202ENST00000371146 PPT1P50897 306 aa5.93□□□□□ -1.46
USP1-202ENST00000371146 MMP15P51511 669 aa5.93□□□□□ -1.46
USP1-202ENST00000371146 PTTG1IPP53801 180 aa5.93□□□□□ -1.46
USP1-202ENST00000371146 ZNF85Q03923 595 aa5.93□□□□□ -1.46
USP1-202ENST00000371146 KLRD1Q13241 179 aa5.93□□□□□ -1.46
USP1-202ENST00000371146 RNF144BQ7Z419 303 aa5.93□□□□□ -1.46
USP1-202ENST00000371146 RNF133Q8WVZ7 376 aa5.93□□□□□ -1.46
USP1-202ENST00000371146 SMIM8Q96KF7 97 aa5.93□□□□□ -1.46
USP1-202ENST00000371146 GINS4Q9BRT9 223 aa5.93□□□□□ -1.46
USP1-202ENST00000371146 CXXC4Q9H2H0 198 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms