RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 TMEM95Q3KNT9 176 aa10.96□□□□□ -0.65
HCFC1-202ENST00000369984 SPTY2D1-AS1A0A0U1RR47 76 aa10.96□□□□□ -0.65
HCFC1-202ENST00000369984 NPBWR2P48146 333 aa10.96□□□□□ -0.65
HCFC1-202ENST00000369984 HERPUD1Q15011 391 aa10.96□□□□□ -0.65
HCFC1-202ENST00000369984 PRSS41Q7RTY9 318 aa10.96□□□□□ -0.65
HCFC1-202ENST00000369984 ANKRD33Q7Z3H0 272 aa10.96□□□□□ -0.65
HCFC1-202ENST00000369984 PHF3Q92576 2039 aaKnown RBP10.96□□□□□ -0.65
HCFC1-202ENST00000369984 TMEM240Q5SV17 173 aa10.96□□□□□ -0.65
HCFC1-202ENST00000369984 ZNF385CQ66K41 422 aaPredicted RBP10.96□□□□□ -0.65
HCFC1-202ENST00000369984 C9orf62Q8N4C0 152 aa10.96□□□□□ -0.65
HCFC1-202ENST00000369984 RAB33BQ9H082 229 aa10.96□□□□□ -0.65
HCFC1-202ENST00000369984 SOCS1O15524 211 aa10.96□□□□□ -0.66
HCFC1-202ENST00000369984 PAGE4O60829 102 aa10.96□□□□□ -0.66
HCFC1-202ENST00000369984 WNT5AP41221 380 aa10.96□□□□□ -0.66
HCFC1-202ENST00000369984 OR6X1Q8NH79 312 aa10.96□□□□□ -0.66
HCFC1-202ENST00000369984 PTX4Q96A99 478 aa10.96□□□□□ -0.66
HCFC1-202ENST00000369984 AURKAIP1Q9NWT8 199 aaPredicted RBP10.96□□□□□ -0.66
HCFC1-202ENST00000369984 C2CD4DB7Z1M9 353 aa10.96□□□□□ -0.66
HCFC1-202ENST00000369984 IGFBP6P24592 240 aaPredicted RBP10.96□□□□□ -0.66
HCFC1-202ENST00000369984 PMELP40967 661 aa10.96□□□□□ -0.66
HCFC1-202ENST00000369984 TEPPQ6URK8 271 aa10.96□□□□□ -0.66
HCFC1-202ENST00000369984 C12orf54Q6X4T0 127 aa10.96□□□□□ -0.66
HCFC1-202ENST00000369984 LDLRAD3Q86YD5 345 aa10.96□□□□□ -0.66
HCFC1-202ENST00000369984 INSIG2Q9Y5U4 225 aa10.96□□□□□ -0.66
HCFC1-202ENST00000369984 TNRC6CQ9HCJ0 1690 aaKnown RBP10.96□□□□□ -0.66
HCFC1-202ENST00000369984 TRAV8-7A0A075B6U6 113 aa10.96□□□□□ -0.66
HCFC1-202ENST00000369984 C7orf77A4D0Y5 90 aa10.96□□□□□ -0.66
HCFC1-202ENST00000369984 TMIGD3P0DMS9 266 aaPredicted RBP10.96□□□□□ -0.66
HCFC1-202ENST00000369984 MRPS11P82912 194 aaKnown RBP10.96□□□□□ -0.66
HCFC1-202ENST00000369984 GCSAMLQ5JQS6 135 aa10.96□□□□□ -0.66
HCFC1-202ENST00000369984 FAM222BQ8WU58 562 aa10.96□□□□□ -0.66
HCFC1-202ENST00000369984 STPG2Q8N412 459 aa10.95□□□□□ -0.66
HCFC1-202ENST00000369984 ST6GAL2Q96JF0 529 aa10.95□□□□□ -0.66
HCFC1-202ENST00000369984 TMEM204Q9BSN7 226 aa10.95□□□□□ -0.66
HCFC1-202ENST00000369984 TMEM30AQ9NV96 361 aa10.95□□□□□ -0.66
HCFC1-202ENST00000369984 PPM1DO15297 605 aa10.95□□□□□ -0.66
HCFC1-202ENST00000369984 GALNSP34059 522 aa10.95□□□□□ -0.66
HCFC1-202ENST00000369984 CD81P60033 236 aa10.95□□□□□ -0.66
HCFC1-202ENST00000369984 ADAMTS17Q8TE56 1095 aa10.95□□□□□ -0.66
HCFC1-202ENST00000369984 MRGPRX3Q96LB0 322 aa10.95□□□□□ -0.66
HCFC1-202ENST00000369984 NTMQ9P121 344 aa10.95□□□□□ -0.66
HCFC1-202ENST00000369984 A0A0B4J293 547 aa10.95□□□□□ -0.66
HCFC1-202ENST00000369984 PPYP01298 95 aa10.95□□□□□ -0.66
HCFC1-202ENST00000369984 PATE4P0C8F1 98 aa10.95□□□□□ -0.66
HCFC1-202ENST00000369984 ZNF735P0CB33 412 aa10.95□□□□□ -0.66
HCFC1-202ENST00000369984 PRSS12P56730 875 aa10.95□□□□□ -0.66
HCFC1-202ENST00000369984 SKP2Q13309 424 aa10.95□□□□□ -0.66
HCFC1-202ENST00000369984 DMRTA1Q5VZB9 504 aa10.95□□□□□ -0.66
HCFC1-202ENST00000369984 OIT3Q8WWZ8 545 aa10.95□□□□□ -0.66
HCFC1-202ENST00000369984 C10orf35Q96D05 121 aa10.95□□□□□ -0.66
HCFC1-202ENST00000369984 SAP30LQ9HAJ7 183 aa10.95□□□□□ -0.66
HCFC1-202ENST00000369984 FAM206AQ9NX38 181 aa10.95□□□□□ -0.66
HCFC1-202ENST00000369984 SS18L1O75177 396 aaPredicted RBP10.95□□□□□ -0.66
HCFC1-202ENST00000369984 SLC23A3Q6PIS1 610 aa10.95□□□□□ -0.66
HCFC1-202ENST00000369984 THSD4Q6ZMP0 1018 aa10.95□□□□□ -0.66
HCFC1-202ENST00000369984 RNF133Q8WVZ7 376 aa10.95□□□□□ -0.66
HCFC1-202ENST00000369984 PSMG3Q9BT73 122 aaPredicted RBP10.95□□□□□ -0.66
HCFC1-202ENST00000369984 HAX1O00165 279 aa10.95□□□□□ -0.66
HCFC1-202ENST00000369984 ZNF205O95201 554 aa10.95□□□□□ -0.66
HCFC1-202ENST00000369984 MT-CO3P00414 261 aa10.95□□□□□ -0.66
HCFC1-202ENST00000369984 FAM3BP58499 235 aaPredicted RBP10.95□□□□□ -0.66
HCFC1-202ENST00000369984 OR4D9Q8NGE8 314 aa10.95□□□□□ -0.66
HCFC1-202ENST00000369984 MRM2Q9UI43 246 aaKnown RBP10.95□□□□□ -0.66
HCFC1-202ENST00000369984 NOTCH3Q9UM47 2321 aa10.95□□□□□ -0.66
HCFC1-202ENST00000369984 MPC1Q9Y5U8 109 aa10.95□□□□□ -0.66
HCFC1-202ENST00000369984 METTL12A8MUP2 240 aa10.95□□□□□ -0.66
HCFC1-202ENST00000369984 PITX3O75364 302 aa10.95□□□□□ -0.66
HCFC1-202ENST00000369984 IGHV4-34P06331 123 aa10.95□□□□□ -0.66
HCFC1-202ENST00000369984 HOXA6P31267 233 aa10.95□□□□□ -0.66
HCFC1-202ENST00000369984 COL19A1Q14993 1142 aa10.95□□□□□ -0.66
HCFC1-202ENST00000369984 KCNMB2Q9Y691 235 aa10.95□□□□□ -0.66
HCFC1-202ENST00000369984 TRPM3Q9HCF6 1732 aaPredicted RBP10.95□□□□□ -0.66
HCFC1-202ENST00000369984 WDR81Q562E7 1941 aa10.94□□□□□ -0.66
HCFC1-202ENST00000369984 CDC42EP2O14613 210 aa10.94□□□□□ -0.66
HCFC1-202ENST00000369984 GHRHP01286 108 aa10.94□□□□□ -0.66
HCFC1-202ENST00000369984 PRSS2P07478 247 aa10.94□□□□□ -0.66
HCFC1-202ENST00000369984 MRPL58Q14197 206 aaKnown RBP10.94□□□□□ -0.66
HCFC1-202ENST00000369984 SURF2Q15527 256 aaPredicted RBP10.94□□□□□ -0.66
HCFC1-202ENST00000369984 PIGYQ3MUY2 71 aa10.94□□□□□ -0.66
HCFC1-202ENST00000369984 ACER2Q5QJU3 275 aa10.94□□□□□ -0.66
HCFC1-202ENST00000369984 AMER3Q8N944 861 aa10.94□□□□□ -0.66
HCFC1-202ENST00000369984 HARBI1Q96MB7 349 aa10.94□□□□□ -0.66
HCFC1-202ENST00000369984 A0A1B0GU03 582 aa10.94□□□□□ -0.66
HCFC1-202ENST00000369984 A0A1W2PRD5 423 aa10.94□□□□□ -0.66
HCFC1-202ENST00000369984 A0A1W2PRF3 423 aa10.94□□□□□ -0.66
HCFC1-202ENST00000369984 A0A1W2PRM7 423 aa10.94□□□□□ -0.66
HCFC1-202ENST00000369984 LNP1A1A4G5 178 aa10.94□□□□□ -0.66
HCFC1-202ENST00000369984 SFTPCP11686 197 aa10.94□□□□□ -0.66
HCFC1-202ENST00000369984 TMEM196Q5HYL7 178 aa10.94□□□□□ -0.66
HCFC1-202ENST00000369984 HOXC4P09017 264 aaPredicted RBP10.94□□□□□ -0.66
HCFC1-202ENST00000369984 RAB1CQ92928 201 aa10.94□□□□□ -0.66
HCFC1-202ENST00000369984 TMEM101Q96IK0 257 aa10.94□□□□□ -0.66
HCFC1-202ENST00000369984 VDAC1P21796 283 aa10.94□□□□□ -0.66
HCFC1-202ENST00000369984 TMEM50BP56557 158 aa10.94□□□□□ -0.66
HCFC1-202ENST00000369984 KCNE1BA0A087WTH5 132 aa10.94□□□□□ -0.66
HCFC1-202ENST00000369984 TMSB15BA0A087X1C1 80 aa10.94□□□□□ -0.66
HCFC1-202ENST00000369984 KCNAB3O43448 404 aa10.94□□□□□ -0.66
HCFC1-202ENST00000369984 CTSVO60911 334 aa10.94□□□□□ -0.66
HCFC1-202ENST00000369984 MMP9P14780 707 aa10.94□□□□□ -0.66
HCFC1-202ENST00000369984 EWSR1Q01844 656 aaKnown RBP eCLIP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms