RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 LYG1Q8N1E2 194 aa4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 CCL17Q92583 94 aa4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 LHX4Q969G2 390 aa4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 LYZL4Q96KX0 146 aa4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 TMEM222Q9H0R3 208 aa4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 RAB1BQ9H0U4 201 aa4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 ARV1Q9H2C2 271 aa4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 GCM1Q9NP62 436 aa4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 C19orf12Q9NSK7 152 aa4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 FKBP11Q9NYL4 201 aa4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 ELOVL5Q9NYP7 299 aa4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 ZNF319Q9P2F9 582 aa4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 LIPGQ9Y5X9 500 aa4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 RTTNQ86VV8 2226 aa4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 PQLC2LA1A4F0 135 aa4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 FAM24AA6NFZ4 105 aa4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 IFNL4K9M1U5 179 aa4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 DNASE2O00115 360 aaPredicted RBP4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 LDLRAD4O15165 306 aa4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 SOX15O60248 233 aa4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 GFRA3O60609 400 aa4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 SMPD2O60906 423 aa4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 GAPDHP04406 335 aaKnown RBP4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 TDGF1P13385 188 aa4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 OTX1P32242 354 aaPredicted RBP4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 NPBWR1P48145 328 aa4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 NPBWR2P48146 333 aa4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 P2RY4P51582 365 aa4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 B2MP61769 119 aa4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 RPS16P62249 146 aaKnown RBP4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 POLR2GP62487 172 aaKnown RBP eCLIP4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 C9orf152Q5JTZ5 239 aa4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 RPL7L1Q6DKI1 246 aaKnown RBP4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 PAQR4Q8N4S7 273 aaPredicted RBP4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 C15orf54Q8N8G6 183 aa4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 OR5T1Q8NG75 326 aa4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 ADAMTS17Q8TE56 1095 aa4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 IL22RA2Q969J5 263 aa4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 MARS2Q96GW9 593 aaKnown RBP4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 TLNRD1Q9H1K6 362 aa4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 TMPRSS5Q9H3S3 457 aa4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 PNRC2Q9NPJ4 139 aaKnown RBP4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 GAR1Q9NY12 217 aaKnown RBP4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 PRR13Q9NZ81 148 aa4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 IL19Q9UHD0 177 aa4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 OSGIN2Q9Y236 505 aa4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 ACACAQ13085 2346 aa4.56□□□□□ -1.68
SMNDC1-202ENST00000369603 NKX2-6A6NCS4 301 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 GPR37O15354 613 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 SRSF10O75494 262 aaKnown RBP4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 DAOP14920 347 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 IGHV1-2P23083 117 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 GLRXP35754 106 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 DVL1P1P54792 670 aaPredicted RBP4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 TLE1Q04724 770 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 GUK1Q16774 197 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 C2orf68Q2NKX9 166 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 VMA21Q3ZAQ7 101 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 MIDNQ504T8 468 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 ARSJQ5FYB0 599 aaPredicted RBP4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 ZNF787Q6DD87 383 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 DBX2Q6ZNG2 339 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 RBMXL3Q8N7X1 1067 aaKnown RBP4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 RNF138Q8WVD3 245 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 GTF3AQ92664 365 aaKnown RBP4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 RAB1CQ92928 201 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 MALSU1Q96EH3 234 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 NEIL1Q96FI4 390 aaPredicted RBP4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 SNX22Q96L94 193 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 PLSCR2Q9NRY7 297 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 MMP24Q9Y5R2 645 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 ZFP92A6NM28 416 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 DEFB108AA8MXU0 73 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 SCTP09683 121 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 MRPS11P82912 194 aaKnown RBP4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 COL10A1Q03692 680 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 AESQ08117 197 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 SLC38A11Q08AI6 406 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 NCMAPQ5T1S8 102 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 WBP1Q96G27 269 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 OR2V2Q96R30 315 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 IGHV3-43A0A0B4J1X8 118 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 F6UZH7 168 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 TMPRSS2O15393 492 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 CHST1O43916 411 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 ZNF205O95201 554 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 ARG1P05089 322 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 MMP7P09237 267 aaPredicted RBP4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 SEC11BP0C7V7 166 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 IGHV3-43DP0DP04 118 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 TAS2R45P59539 299 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 HAGHQ16775 308 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 TMEM30BQ3MIR4 351 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 AWAT1Q58HT5 328 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 VWA1Q6PCB0 445 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 KCNIP4Q6PIL6 250 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 CLEC9AQ6UXN8 241 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 ZNF66Q6ZN08 573 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 CALHM1Q8IU99 346 aa4.55□□□□□ -1.68
SMNDC1-202ENST00000369603 GCSAMQ8N6F7 178 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms