RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 CACNG5Q9UF02 275 aa10.51□□□□□ -0.73
PHGDH-201ENST00000369407 B4E171 279 aa10.51□□□□□ -0.73
PHGDH-201ENST00000369407 PPP5D1E7EU14 171 aa10.51□□□□□ -0.73
PHGDH-201ENST00000369407 IRF2P14316 349 aa10.51□□□□□ -0.73
PHGDH-201ENST00000369407 PAX1P15863 534 aa10.51□□□□□ -0.73
PHGDH-201ENST00000369407 MRPS11P82912 194 aaKnown RBP10.51□□□□□ -0.73
PHGDH-201ENST00000369407 PSG4Q00888 419 aa10.51□□□□□ -0.73
PHGDH-201ENST00000369407 PNRC1Q12796 327 aaPredicted RBP10.51□□□□□ -0.73
PHGDH-201ENST00000369407 SSPNQ14714 243 aa10.51□□□□□ -0.73
PHGDH-201ENST00000369407 SPANXN5Q5MJ07 72 aa10.51□□□□□ -0.73
PHGDH-201ENST00000369407 OR8G2PQ6IF36 304 aa10.51□□□□□ -0.73
PHGDH-201ENST00000369407 HAPLN4Q86UW8 402 aa10.51□□□□□ -0.73
PHGDH-201ENST00000369407 C11orf42Q8N5U0 333 aa10.51□□□□□ -0.73
PHGDH-201ENST00000369407 OR2V1Q8NHB1 315 aa10.51□□□□□ -0.73
PHGDH-201ENST00000369407 CHRNA10Q9GZZ6 450 aa10.51□□□□□ -0.73
PHGDH-201ENST00000369407 MTIF3Q9H2K0 278 aaKnown RBP10.51□□□□□ -0.73
PHGDH-201ENST00000369407 SRD5A3Q9H8P0 318 aa10.51□□□□□ -0.73
PHGDH-201ENST00000369407 FAM186AA6NE01 2351 aa10.51□□□□□ -0.73
PHGDH-201ENST00000369407 COL5A1P20908 1838 aaPredicted RBP10.51□□□□□ -0.73
PHGDH-201ENST00000369407 A0A0J9YW62 118 aa10.51□□□□□ -0.73
PHGDH-201ENST00000369407 UBE2L5PA0A1B0GUS4 154 aa10.51□□□□□ -0.73
PHGDH-201ENST00000369407 PRSS47A8MTI9 375 aa10.51□□□□□ -0.73
PHGDH-201ENST00000369407 HS3ST1O14792 307 aa10.51□□□□□ -0.73
PHGDH-201ENST00000369407 TRAPPC6AO75865 159 aa10.51□□□□□ -0.73
PHGDH-201ENST00000369407 IGKV1D-33P01593 117 aa10.51□□□□□ -0.73
PHGDH-201ENST00000369407 IGKV1-33P01594 117 aa10.51□□□□□ -0.73
PHGDH-201ENST00000369407 PFN1P07737 140 aaKnown RBP10.51□□□□□ -0.73
PHGDH-201ENST00000369407 CST2P09228 141 aa10.51□□□□□ -0.73
PHGDH-201ENST00000369407 UCP1P25874 307 aa10.51□□□□□ -0.73
PHGDH-201ENST00000369407 CD81P60033 236 aa10.51□□□□□ -0.73
PHGDH-201ENST00000369407 EIF3IQ13347 325 aaKnown RBP10.51□□□□□ -0.73
PHGDH-201ENST00000369407 C20orf204Q6ZNR8 217 aa10.51□□□□□ -0.73
PHGDH-201ENST00000369407 ZDHHC23Q8IYP9 409 aa10.51□□□□□ -0.73
PHGDH-201ENST00000369407 TSTD1Q8NFU3 115 aa10.51□□□□□ -0.73
PHGDH-201ENST00000369407 LHX4Q969G2 390 aa10.51□□□□□ -0.73
PHGDH-201ENST00000369407 SLC25A22Q9H936 323 aa10.51□□□□□ -0.73
PHGDH-201ENST00000369407 FOXJ2Q9P0K8 574 aa10.51□□□□□ -0.73
PHGDH-201ENST00000369407 WDFY4Q6ZS81 3184 aa10.5□□□□□ -0.73
PHGDH-201ENST00000369407 H7BYZ3 331 aa10.5□□□□□ -0.73
PHGDH-201ENST00000369407 SERPINE2P07093 398 aa10.5□□□□□ -0.73
PHGDH-201ENST00000369407 CCL3P10147 92 aa10.5□□□□□ -0.73
PHGDH-201ENST00000369407 EGR1P18146 543 aa10.5□□□□□ -0.73
PHGDH-201ENST00000369407 MDH2P40926 338 aaKnown RBP10.5□□□□□ -0.73
PHGDH-201ENST00000369407 FAM3BP58499 235 aaPredicted RBP10.5□□□□□ -0.73
PHGDH-201ENST00000369407 SAPCD1Q5SSQ6 148 aa10.5□□□□□ -0.73
PHGDH-201ENST00000369407 FAM27BQ5VT28 67 aa10.5□□□□□ -0.73
PHGDH-201ENST00000369407 CLEC2AQ6UVW9 174 aa10.5□□□□□ -0.73
PHGDH-201ENST00000369407 C10orf35Q96D05 121 aa10.5□□□□□ -0.73
PHGDH-201ENST00000369407 VAX2Q9UIW0 290 aa10.5□□□□□ -0.73
PHGDH-201ENST00000369407 CHCHD2Q9Y6H1 151 aaPredicted RBP10.5□□□□□ -0.73
PHGDH-201ENST00000369407 R4GN57 208 aa10.5□□□□□ -0.73
PHGDH-201ENST00000369407 TRIOBPQ9H2D6 2365 aa10.5□□□□□ -0.73
PHGDH-201ENST00000369407 SCRG1O75711 98 aa10.5□□□□□ -0.73
PHGDH-201ENST00000369407 GPM6AP51674 278 aa10.5□□□□□ -0.73
PHGDH-201ENST00000369407 FUT6P51993 359 aa10.5□□□□□ -0.73
PHGDH-201ENST00000369407 RAB35Q15286 201 aa10.5□□□□□ -0.73
PHGDH-201ENST00000369407 SHHQ15465 462 aa10.5□□□□□ -0.73
PHGDH-201ENST00000369407 TMEM241Q24JQ0 296 aa10.5□□□□□ -0.73
PHGDH-201ENST00000369407 BSXQ3C1V8 233 aa10.5□□□□□ -0.73
PHGDH-201ENST00000369407 ASCL4Q6XD76 172 aa10.5□□□□□ -0.73
PHGDH-201ENST00000369407 RDH5Q92781 318 aa10.5□□□□□ -0.73
PHGDH-201ENST00000369407 TMEM242Q9NWH2 141 aa10.5□□□□□ -0.73
PHGDH-201ENST00000369407 PSENENQ9NZ42 101 aa10.5□□□□□ -0.73
PHGDH-201ENST00000369407 PPP1R3CQ9UQK1 317 aa10.5□□□□□ -0.73
PHGDH-201ENST00000369407 URB1O60287 2271 aaKnown RBP10.5□□□□□ -0.73
PHGDH-201ENST00000369407 CHRNA7P36544 502 aa10.49□□□□□ -0.73
PHGDH-201ENST00000369407 RPL23P62829 140 aaKnown RBP10.49□□□□□ -0.73
PHGDH-201ENST00000369407 RHBDD2Q6NTF9 364 aa10.49□□□□□ -0.73
PHGDH-201ENST00000369407 C22orf15Q8WYQ4 148 aa10.49□□□□□ -0.73
PHGDH-201ENST00000369407 OR4C12Q96R67 309 aa10.49□□□□□ -0.73
PHGDH-201ENST00000369407 ACTR3CQ9C0K3 210 aaPredicted RBP10.49□□□□□ -0.73
PHGDH-201ENST00000369407 ERRFI1Q9UJM3 462 aaPredicted RBP10.49□□□□□ -0.73
PHGDH-201ENST00000369407 CD27P26842 260 aa10.49□□□□□ -0.73
PHGDH-201ENST00000369407 CST9LP1Q5W188 147 aa10.49□□□□□ -0.73
PHGDH-201ENST00000369407 Q6ZSR3 168 aa10.49□□□□□ -0.73
PHGDH-201ENST00000369407 Q6ZVH6 145 aa10.49□□□□□ -0.73
PHGDH-201ENST00000369407 ZNF525Q8N782 197 aa10.49□□□□□ -0.73
PHGDH-201ENST00000369407 OR51G1Q8NGK1 321 aa10.49□□□□□ -0.73
PHGDH-201ENST00000369407 R3HDM4Q96D70 268 aa10.49□□□□□ -0.73
PHGDH-201ENST00000369407 OR5B12Q96R08 314 aa10.49□□□□□ -0.73
PHGDH-201ENST00000369407 SLC39A9Q9NUM3 307 aa10.49□□□□□ -0.73
PHGDH-201ENST00000369407 COL6A3P12111 3177 aa10.49□□□□□ -0.73
PHGDH-201ENST00000369407 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.49□□□□□ -0.73
PHGDH-201ENST00000369407 TRAV1-1A0A0B4J248 108 aa10.49□□□□□ -0.73
PHGDH-201ENST00000369407 hCG_38984A0A1B0GV85 526 aa10.49□□□□□ -0.73
PHGDH-201ENST00000369407 PIAS2O75928 621 aa10.49□□□□□ -0.73
PHGDH-201ENST00000369407 CEACAM8P31997 349 aaPredicted RBP10.49□□□□□ -0.73
PHGDH-201ENST00000369407 PMP22Q01453 160 aa10.49□□□□□ -0.73
PHGDH-201ENST00000369407 DNLZQ5SXM8 178 aa10.49□□□□□ -0.73
PHGDH-201ENST00000369407 ABLIM2Q6H8Q1 611 aa10.49□□□□□ -0.73
PHGDH-201ENST00000369407 YRDCQ86U90 279 aaKnown RBP10.49□□□□□ -0.73
PHGDH-201ENST00000369407 SLC25A45Q8N413 288 aa10.49□□□□□ -0.73
PHGDH-201ENST00000369407 RPP25LQ8N5L8 163 aaKnown RBP10.49□□□□□ -0.73
PHGDH-201ENST00000369407 OR10G4Q8NGN3 311 aa10.49□□□□□ -0.73
PHGDH-201ENST00000369407 OR4F5Q8NH21 305 aa10.49□□□□□ -0.73
PHGDH-201ENST00000369407 RNF138Q8WVD3 245 aa10.49□□□□□ -0.73
PHGDH-201ENST00000369407 OR4F4Q96R69 305 aa10.49□□□□□ -0.73
PHGDH-201ENST00000369407 PARD6GQ9BYG4 376 aaPredicted RBP10.49□□□□□ -0.73
PHGDH-201ENST00000369407 FGF23Q9GZV9 251 aaPredicted RBP10.49□□□□□ -0.73
PHGDH-201ENST00000369407 NAT8Q9UHE5 227 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms