RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 IGHV1-69-2A0A0G2JMI3 117 aa11.7□□□□□ -0.54
HMGCS2-201ENST00000369406 H7C1Q1 480 aa11.7□□□□□ -0.54
HMGCS2-201ENST00000369406 MGST3O14880 152 aa11.7□□□□□ -0.54
HMGCS2-201ENST00000369406 TNFSF12O43508 249 aa11.7□□□□□ -0.54
HMGCS2-201ENST00000369406 GIPP09681 153 aaPredicted RBP11.7□□□□□ -0.54
HMGCS2-201ENST00000369406 OR5AC1P0C628 307 aa11.7□□□□□ -0.54
HMGCS2-201ENST00000369406 IRF2P14316 349 aa11.7□□□□□ -0.54
HMGCS2-201ENST00000369406 P2RX3P56373 397 aa11.7□□□□□ -0.54
HMGCS2-201ENST00000369406 EDDM3BP56851 147 aa11.7□□□□□ -0.54
HMGCS2-201ENST00000369406 SNRPD2P62316 118 aaKnown RBP11.7□□□□□ -0.54
HMGCS2-201ENST00000369406 SLC38A6Q8IZM9 456 aa11.7□□□□□ -0.54
HMGCS2-201ENST00000369406 LHFPL5Q8TAF8 219 aa11.7□□□□□ -0.54
HMGCS2-201ENST00000369406 TP53RKQ96S44 253 aa11.7□□□□□ -0.54
HMGCS2-201ENST00000369406 PHB2Q99623 299 aa11.7□□□□□ -0.54
HMGCS2-201ENST00000369406 SLC5A7Q9GZV3 580 aa11.7□□□□□ -0.54
HMGCS2-201ENST00000369406 NAA60Q9H7X0 242 aa11.7□□□□□ -0.54
HMGCS2-201ENST00000369406 CTSZQ9UBR2 303 aa11.7□□□□□ -0.54
HMGCS2-201ENST00000369406 FBXO9Q9UK97 447 aaPredicted RBP11.7□□□□□ -0.54
HMGCS2-201ENST00000369406 LGALS8O00214 317 aa11.7□□□□□ -0.54
HMGCS2-201ENST00000369406 MUC1P15941 1255 aaPredicted RBP11.7□□□□□ -0.54
HMGCS2-201ENST00000369406 PPP1CCP36873 323 aaKnown RBP11.7□□□□□ -0.54
HMGCS2-201ENST00000369406 ECI1P42126 302 aa11.7□□□□□ -0.54
HMGCS2-201ENST00000369406 LTC4SQ16873 150 aa11.7□□□□□ -0.54
HMGCS2-201ENST00000369406 ZNF561Q8N587 486 aa11.7□□□□□ -0.54
HMGCS2-201ENST00000369406 OR10V1Q8NGI7 309 aa11.7□□□□□ -0.54
HMGCS2-201ENST00000369406 ZFAND1Q8TCF1 268 aa11.7□□□□□ -0.54
HMGCS2-201ENST00000369406 TRAV14DV4A0A0A6YYC5 116 aa11.69□□□□□ -0.54
HMGCS2-201ENST00000369406 SIGLEC5O15389 551 aa11.69□□□□□ -0.54
HMGCS2-201ENST00000369406 DIRAS3O95661 229 aa11.69□□□□□ -0.54
HMGCS2-201ENST00000369406 CTXN2P0C2S0 81 aa11.69□□□□□ -0.54
HMGCS2-201ENST00000369406 OMGP23515 440 aa11.69□□□□□ -0.54
HMGCS2-201ENST00000369406 CEACAM6P40199 344 aa11.69□□□□□ -0.54
HMGCS2-201ENST00000369406 TMEM187Q14656 261 aa11.69□□□□□ -0.54
HMGCS2-201ENST00000369406 C11orf88Q6PI97 169 aa11.69□□□□□ -0.54
HMGCS2-201ENST00000369406 C9orf62Q8N4C0 152 aa11.69□□□□□ -0.54
HMGCS2-201ENST00000369406 PPIAL4EA0A075B759 164 aa11.69□□□□□ -0.54
HMGCS2-201ENST00000369406 TEX13DA0A0J9YY54 714 aaPredicted RBP11.69□□□□□ -0.54
HMGCS2-201ENST00000369406 LRRC30A6NM36 301 aa11.69□□□□□ -0.54
HMGCS2-201ENST00000369406 POM121CA8CG34 1229 aa11.69□□□□□ -0.54
HMGCS2-201ENST00000369406 PPIAL4DF5H284 164 aa11.69□□□□□ -0.54
HMGCS2-201ENST00000369406 TMPRSS2O15393 492 aa11.69□□□□□ -0.54
HMGCS2-201ENST00000369406 IFNA2P01563 188 aa11.69□□□□□ -0.54
HMGCS2-201ENST00000369406 PPIAL4FP0DN26 164 aa11.69□□□□□ -0.54
HMGCS2-201ENST00000369406 CGB3P0DN86 165 aa11.69□□□□□ -0.54
HMGCS2-201ENST00000369406 CGB7P0DN87 165 aa11.69□□□□□ -0.54
HMGCS2-201ENST00000369406 DNASE1P24855 282 aa11.69□□□□□ -0.54
HMGCS2-201ENST00000369406 ERVFRD-1P60508 538 aa11.69□□□□□ -0.54
HMGCS2-201ENST00000369406 ABCA11PQ4W5N1 156 aa11.69□□□□□ -0.54
HMGCS2-201ENST00000369406 ARL11Q969Q4 196 aa11.69□□□□□ -0.54
HMGCS2-201ENST00000369406 OR10C1Q96KK4 312 aa11.69□□□□□ -0.54
HMGCS2-201ENST00000369406 ZNF665Q9H7R5 613 aa11.69□□□□□ -0.54
HMGCS2-201ENST00000369406 MGAT4AQ9UM21 535 aa11.69□□□□□ -0.54
HMGCS2-201ENST00000369406 PPIAL4AQ9Y536 164 aa11.69□□□□□ -0.54
HMGCS2-201ENST00000369406 SVEP1Q4LDE5 3571 aa11.69□□□□□ -0.54
HMGCS2-201ENST00000369406 MALRD1Q5VYJ5 2156 aa11.68□□□□□ -0.54
HMGCS2-201ENST00000369406 FAM25EA8MYX2 175 aa11.68□□□□□ -0.54
HMGCS2-201ENST00000369406 IGHV3-7P01780 117 aa11.68□□□□□ -0.54
HMGCS2-201ENST00000369406 HLA-GP17693 338 aa11.68□□□□□ -0.54
HMGCS2-201ENST00000369406 PPOXP50336 477 aa11.68□□□□□ -0.54
HMGCS2-201ENST00000369406 C17orf58Q2M2W7 97 aa11.68□□□□□ -0.54
HMGCS2-201ENST00000369406 TBC1D26Q86UD7 250 aa11.68□□□□□ -0.54
HMGCS2-201ENST00000369406 GLYATL2Q8WU03 294 aa11.68□□□□□ -0.54
HMGCS2-201ENST00000369406 CLEC4MQ9H2X3 399 aaPredicted RBP11.68□□□□□ -0.54
HMGCS2-201ENST00000369406 CBLN4Q9NTU7 201 aa11.68□□□□□ -0.54
HMGCS2-201ENST00000369406 SPG11Q96JI7 2443 aa11.68□□□□□ -0.54
HMGCS2-201ENST00000369406 NBPF19A0A087WUL8 3843 aa11.68□□□□□ -0.54
HMGCS2-201ENST00000369406 HSPA12AO43301 675 aa11.68□□□□□ -0.54
HMGCS2-201ENST00000369406 RP2O75695 350 aa11.68□□□□□ -0.54
HMGCS2-201ENST00000369406 OR8U9P0C7N5 309 aa11.68□□□□□ -0.54
HMGCS2-201ENST00000369406 SGPP2Q8IWX5 399 aa11.68□□□□□ -0.54
HMGCS2-201ENST00000369406 OR8U1Q8NH10 309 aa11.68□□□□□ -0.54
HMGCS2-201ENST00000369406 MSI2Q96DH6 328 aaKnown RBP11.68□□□□□ -0.54
HMGCS2-201ENST00000369406 LURAP1Q96LR2 239 aa11.68□□□□□ -0.54
HMGCS2-201ENST00000369406 TMEM246Q9BRR3 403 aa11.68□□□□□ -0.54
HMGCS2-201ENST00000369406 KCNIP1Q9NZI2 227 aa11.68□□□□□ -0.54
HMGCS2-201ENST00000369406 RNF150Q9ULK6 438 aa11.68□□□□□ -0.54
HMGCS2-201ENST00000369406 LAMP3Q9UQV4 416 aa11.68□□□□□ -0.54
HMGCS2-201ENST00000369406 MPPED1O15442 326 aa11.67□□□□□ -0.54
HMGCS2-201ENST00000369406 NDUFS7O75251 213 aa11.67□□□□□ -0.54
HMGCS2-201ENST00000369406 MMP23AO75900 390 aa11.67□□□□□ -0.54
HMGCS2-201ENST00000369406 HOXB5P09067 269 aa11.67□□□□□ -0.54
HMGCS2-201ENST00000369406 IL2RGP31785 369 aa11.67□□□□□ -0.54
HMGCS2-201ENST00000369406 RAP2BP61225 183 aa11.67□□□□□ -0.54
HMGCS2-201ENST00000369406 SRSF4Q08170 494 aaKnown RBP11.67□□□□□ -0.54
HMGCS2-201ENST00000369406 CR1LQ2VPA4 569 aa11.67□□□□□ -0.54
HMGCS2-201ENST00000369406 GALMQ96C23 342 aa11.67□□□□□ -0.54
HMGCS2-201ENST00000369406 DNTTIP1Q9H147 329 aa11.67□□□□□ -0.54
HMGCS2-201ENST00000369406 C19orf12Q9NSK7 152 aa11.67□□□□□ -0.54
HMGCS2-201ENST00000369406 USP9YO00507 2555 aaPredicted RBP11.67□□□□□ -0.54
HMGCS2-201ENST00000369406 GPR31O00270 319 aa11.67□□□□□ -0.54
HMGCS2-201ENST00000369406 LOXL3P58215 753 aa11.67□□□□□ -0.54
HMGCS2-201ENST00000369406 MEX3BQ6ZN04 569 aaKnown RBP11.67□□□□□ -0.54
HMGCS2-201ENST00000369406 ZNF565Q8N9K5 539 aa11.67□□□□□ -0.54
HMGCS2-201ENST00000369406 LEAP2Q969E1 77 aa11.67□□□□□ -0.54
HMGCS2-201ENST00000369406 C14orf79Q96F83 325 aa11.67□□□□□ -0.54
HMGCS2-201ENST00000369406 GALNT14Q96FL9 552 aa11.67□□□□□ -0.54
HMGCS2-201ENST00000369406 TRAF4Q9BUZ4 470 aaPredicted RBP11.67□□□□□ -0.54
HMGCS2-201ENST00000369406 UBTD1Q9HAC8 227 aa11.67□□□□□ -0.54
HMGCS2-201ENST00000369406 TRAV38-1A0A0B4J264 116 aa11.66□□□□□ -0.54
HMGCS2-201ENST00000369406 A0A0B4J2A0 478 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms