RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 KBTBD11-OT1A0A1B0GTJ5 212 aa19.75■□□□□ 0.75
SNX3-203ENST00000368979 ZNF729A6NN14 1252 aaPredicted RBP19.75■□□□□ 0.75
SNX3-203ENST00000368979 SFT2D2O95562 160 aa19.75■□□□□ 0.75
SNX3-203ENST00000368979 PIGPP57054 158 aa19.75■□□□□ 0.75
SNX3-203ENST00000368979 ZNF841Q6ZN19 808 aa19.75■□□□□ 0.75
SNX3-203ENST00000368979 ZNF295-AS1Q8N0V1 137 aa19.75■□□□□ 0.75
SNX3-203ENST00000368979 SLC5A7Q9GZV3 580 aa19.75■□□□□ 0.75
SNX3-203ENST00000368979 LINC00574Q9H8X3 128 aa19.75■□□□□ 0.75
SNX3-203ENST00000368979 RAB9BQ9NP90 201 aa19.75■□□□□ 0.75
SNX3-203ENST00000368979 SLC2A9Q9NRM0 540 aa19.75■□□□□ 0.75
SNX3-203ENST00000368979 CLN8Q9UBY8 286 aa19.75■□□□□ 0.75
SNX3-203ENST00000368979 JPT1Q9UK76 154 aa19.75■□□□□ 0.75
SNX3-203ENST00000368979 UBE2J1Q9Y385 318 aaPredicted RBP19.75■□□□□ 0.75
SNX3-203ENST00000368979 FLNBO75369 2602 aaKnown RBP19.74■□□□□ 0.75
SNX3-203ENST00000368979 SETXQ7Z333 2677 aaKnown RBP19.74■□□□□ 0.75
SNX3-203ENST00000368979 CRYM-AS1A6NIL9 109 aa19.74■□□□□ 0.75
SNX3-203ENST00000368979 DUS4LO95620 317 aaKnown RBP19.74■□□□□ 0.75
SNX3-203ENST00000368979 RPL31P62899 125 aaKnown RBP19.74■□□□□ 0.75
SNX3-203ENST00000368979 ABCA11PQ4W5N1 156 aa19.74■□□□□ 0.75
SNX3-203ENST00000368979 FAM53AQ6NSI3 398 aaPredicted RBP19.74■□□□□ 0.75
SNX3-203ENST00000368979 C12orf45Q8N5I9 185 aaPredicted RBP19.74■□□□□ 0.75
SNX3-203ENST00000368979 MITD1Q8WV92 249 aa19.74■□□□□ 0.75
SNX3-203ENST00000368979 NINJ1Q92982 152 aa19.74■□□□□ 0.75
SNX3-203ENST00000368979 OR2S2Q9NQN1 319 aa19.74■□□□□ 0.75
SNX3-203ENST00000368979 TAS2R3Q9NYW6 316 aa19.74■□□□□ 0.75
SNX3-203ENST00000368979 LPAR3Q9UBY5 353 aa19.74■□□□□ 0.75
SNX3-203ENST00000368979 LRBAP50851 2863 aa19.73■□□□□ 0.75
SNX3-203ENST00000368979 A8MV72 311 aaPredicted RBP19.73■□□□□ 0.75
SNX3-203ENST00000368979 CXCL3P19876 107 aa19.73■□□□□ 0.75
SNX3-203ENST00000368979 LUMP51884 338 aaPredicted RBP19.73■□□□□ 0.75
SNX3-203ENST00000368979 PHLDA2Q53GA4 152 aa19.73■□□□□ 0.75
SNX3-203ENST00000368979 ZNF818PQ6ZRF7 136 aa19.73■□□□□ 0.75
SNX3-203ENST00000368979 SPICQ8N5J4 248 aa19.73■□□□□ 0.75
SNX3-203ENST00000368979 OR2AK2Q8NG84 335 aa19.73■□□□□ 0.75
SNX3-203ENST00000368979 CCL28Q9NRJ3 127 aa19.73■□□□□ 0.75
SNX3-203ENST00000368979 MIOXQ9UGB7 285 aa19.73■□□□□ 0.75
SNX3-203ENST00000368979 IGHV3-43A0A0B4J1X8 118 aa19.72■□□□□ 0.75
SNX3-203ENST00000368979 GPR31O00270 319 aa19.72■□□□□ 0.75
SNX3-203ENST00000368979 IGHV3-43DP0DP04 118 aa19.72■□□□□ 0.75
SNX3-203ENST00000368979 PPP1CCP36873 323 aaKnown RBP19.72■□□□□ 0.75
SNX3-203ENST00000368979 LOXL3P58215 753 aa19.72■□□□□ 0.75
SNX3-203ENST00000368979 RND3P61587 244 aa19.72■□□□□ 0.75
SNX3-203ENST00000368979 CD83Q01151 205 aa19.72■□□□□ 0.75
SNX3-203ENST00000368979 ZNF273Q14593 569 aa19.72■□□□□ 0.75
SNX3-203ENST00000368979 SGPP2Q8IWX5 399 aa19.72■□□□□ 0.75
SNX3-203ENST00000368979 FAM185AQ8N0U4 392 aa19.72■□□□□ 0.75
SNX3-203ENST00000368979 RTN4IP1Q8WWV3 396 aaPredicted RBP19.72■□□□□ 0.75
SNX3-203ENST00000368979 H1FXQ92522 213 aaKnown RBP19.72■□□□□ 0.75
SNX3-203ENST00000368979 RANGRFQ9HD47 186 aaPredicted RBP19.72■□□□□ 0.75
SNX3-203ENST00000368979 KIAA2026Q5HYC2 2103 aa19.72■□□□□ 0.75
SNX3-203ENST00000368979 IGHV4-39P01824 125 aa19.71■□□□□ 0.75
SNX3-203ENST00000368979 CD34P28906 385 aa19.71■□□□□ 0.75
SNX3-203ENST00000368979 GPR6P46095 362 aaPredicted RBP19.71■□□□□ 0.75
SNX3-203ENST00000368979 CCDC71LQ8N9Z2 235 aa19.71■□□□□ 0.75
SNX3-203ENST00000368979 OR8B3Q8NGG8 313 aa19.71■□□□□ 0.75
SNX3-203ENST00000368979 CASTOR1Q8WTX7 329 aa19.71■□□□□ 0.75
SNX3-203ENST00000368979 NEIL1Q96FI4 390 aaPredicted RBP19.71■□□□□ 0.75
SNX3-203ENST00000368979 OR8B2Q96RD0 313 aa19.71■□□□□ 0.75
SNX3-203ENST00000368979 NAA60Q9H7X0 242 aa19.71■□□□□ 0.75
SNX3-203ENST00000368979 COL12A1Q99715 3063 aa19.71■□□□□ 0.75
SNX3-203ENST00000368979 ASH1LQ9NR48 2969 aaKnown RBP19.71■□□□□ 0.75
SNX3-203ENST00000368979 TENM4Q6N022 2769 aa19.71■□□□□ 0.75
SNX3-203ENST00000368979 HSD17B6O14756 317 aa19.71■□□□□ 0.75
SNX3-203ENST00000368979 YPEL1O60688 119 aa19.71■□□□□ 0.75
SNX3-203ENST00000368979 WNT2P09544 360 aa19.71■□□□□ 0.75
SNX3-203ENST00000368979 OMGP23515 440 aa19.71■□□□□ 0.75
SNX3-203ENST00000368979 SLC9A3R2Q15599 337 aa19.71■□□□□ 0.75
SNX3-203ENST00000368979 LTC4SQ16873 150 aa19.71■□□□□ 0.75
SNX3-203ENST00000368979 TMEM200BQ69YZ2 307 aa19.71■□□□□ 0.75
SNX3-203ENST00000368979 YPEL2Q96QA6 119 aa19.71■□□□□ 0.75
SNX3-203ENST00000368979 PHB2Q99623 299 aa19.71■□□□□ 0.75
SNX3-203ENST00000368979 MGAT4CQ9UBM8 478 aa19.71■□□□□ 0.75
SNX3-203ENST00000368979 TRBV23-1A0A0A0MS06 115 aa19.7■□□□□ 0.74
SNX3-203ENST00000368979 A0A0B4J2A0 478 aa19.7■□□□□ 0.74
SNX3-203ENST00000368979 TEX13DA0A0J9YY54 714 aaPredicted RBP19.7■□□□□ 0.74
SNX3-203ENST00000368979 BOLA2-SMG1P6H3BVE0 249 aa19.7■□□□□ 0.74
SNX3-203ENST00000368979 GPR37O15354 613 aa19.7■□□□□ 0.74
SNX3-203ENST00000368979 IGLV2-14P01704 120 aa19.7■□□□□ 0.74
SNX3-203ENST00000368979 HNRNPCP07910 306 aaKnown RBP eCLIP19.7■□□□□ 0.74
SNX3-203ENST00000368979 C2orf68Q2NKX9 166 aa19.7■□□□□ 0.74
SNX3-203ENST00000368979 TMEM30BQ3MIR4 351 aa19.7■□□□□ 0.74
SNX3-203ENST00000368979 NLRC3Q7RTR2 1065 aa19.7■□□□□ 0.74
SNX3-203ENST00000368979 BVESQ8NE79 360 aa19.7■□□□□ 0.74
SNX3-203ENST00000368979 GALNT14Q96FL9 552 aa19.7■□□□□ 0.74
SNX3-203ENST00000368979 FYTTD1Q96QD9 318 aaKnown RBP19.7■□□□□ 0.74
SNX3-203ENST00000368979 GAL3ST2Q9H3Q3 398 aa19.7■□□□□ 0.74
SNX3-203ENST00000368979 IDI2-AS1Q9NZ38 188 aa19.7■□□□□ 0.74
SNX3-203ENST00000368979 GNG12Q9UBI6 72 aa19.7■□□□□ 0.74
SNX3-203ENST00000368979 SHPKQ9UHJ6 478 aa19.7■□□□□ 0.74
SNX3-203ENST00000368979 F5H0A9 414 aaPredicted RBP19.69■□□□□ 0.74
SNX3-203ENST00000368979 OR8U9P0C7N5 309 aa19.69■□□□□ 0.74
SNX3-203ENST00000368979 MORN2Q502X0 79 aa19.69■□□□□ 0.74
SNX3-203ENST00000368979 C11orf88Q6PI97 169 aa19.69■□□□□ 0.74
SNX3-203ENST00000368979 TCTE3Q8IZS6 198 aa19.69■□□□□ 0.74
SNX3-203ENST00000368979 ZNF525Q8N782 197 aa19.69■□□□□ 0.74
SNX3-203ENST00000368979 UXS1Q8NBZ7 420 aa19.69■□□□□ 0.74
SNX3-203ENST00000368979 OR8U1Q8NH10 309 aa19.69■□□□□ 0.74
SNX3-203ENST00000368979 FAM216AQ8WUB2 273 aa19.69■□□□□ 0.74
SNX3-203ENST00000368979 ZNF714Q96N38 554 aa19.69■□□□□ 0.74
SNX3-203ENST00000368979 PATZ1Q9HBE1 687 aaKnown RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms