RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 LRFN3Q9BTN0 628 aa10.28□□□□□ -0.76
CDC42BPA-202ENST00000366764 ANKHD1Q8IWZ3 2542 aaKnown RBP10.28□□□□□ -0.76
CDC42BPA-202ENST00000366764 OR10J1P30954 320 aa10.27□□□□□ -0.76
CDC42BPA-202ENST00000366764 CDX1P47902 265 aaPredicted RBP10.27□□□□□ -0.76
CDC42BPA-202ENST00000366764 GINS3Q9BRX5 216 aa10.27□□□□□ -0.76
CDC42BPA-202ENST00000366764 PSG11Q9UQ72 335 aa10.27□□□□□ -0.76
CDC42BPA-202ENST00000366764 C9orf50Q5SZB4 431 aa10.27□□□□□ -0.76
CDC42BPA-202ENST00000366764 SPATA46Q5T0L3 261 aa10.27□□□□□ -0.76
CDC42BPA-202ENST00000366764 OR10C1Q96KK4 312 aa10.27□□□□□ -0.76
CDC42BPA-202ENST00000366764 AMELYQ99218 206 aa10.27□□□□□ -0.76
CDC42BPA-202ENST00000366764 ATP23Q9Y6H3 246 aa10.27□□□□□ -0.76
CDC42BPA-202ENST00000366764 BDP1A6H8Y1 2624 aa10.27□□□□□ -0.76
CDC42BPA-202ENST00000366764 VAMP3Q15836 100 aa10.27□□□□□ -0.77
CDC42BPA-202ENST00000366764 LRRC10Q5BKY1 277 aa10.27□□□□□ -0.77
CDC42BPA-202ENST00000366764 NR2C2APQ86WQ0 139 aa10.27□□□□□ -0.77
CDC42BPA-202ENST00000366764 MRGPRFQ96AM1 343 aa10.27□□□□□ -0.77
CDC42BPA-202ENST00000366764 PAFAH1B2P68402 229 aa10.27□□□□□ -0.77
CDC42BPA-202ENST00000366764 SMRP1Q8NCR6 262 aa10.27□□□□□ -0.77
CDC42BPA-202ENST00000366764 DTD1Q8TEA8 209 aa10.27□□□□□ -0.77
CDC42BPA-202ENST00000366764 H1FXQ92522 213 aaKnown RBP10.27□□□□□ -0.77
CDC42BPA-202ENST00000366764 BCL2L2Q92843 193 aaPredicted RBP10.27□□□□□ -0.77
CDC42BPA-202ENST00000366764 DHRS11Q6UWP2 260 aa10.27□□□□□ -0.77
CDC42BPA-202ENST00000366764 LSM10Q969L4 123 aaKnown RBP10.27□□□□□ -0.77
CDC42BPA-202ENST00000366764 PPP1R14DQ9NXH3 145 aa10.27□□□□□ -0.77
CDC42BPA-202ENST00000366764 CISD1Q9NZ45 108 aaKnown RBP10.27□□□□□ -0.77
CDC42BPA-202ENST00000366764 RPS16P62249 146 aaKnown RBP10.27□□□□□ -0.77
CDC42BPA-202ENST00000366764 MARS2Q96GW9 593 aaKnown RBP10.27□□□□□ -0.77
CDC42BPA-202ENST00000366764 OBSL1O75147 1896 aa10.27□□□□□ -0.77
CDC42BPA-202ENST00000366764 NCMAPQ5T1S8 102 aa10.27□□□□□ -0.77
CDC42BPA-202ENST00000366764 OR10AD1Q8NGE0 317 aa10.27□□□□□ -0.77
CDC42BPA-202ENST00000366764 B4E171 279 aa10.27□□□□□ -0.77
CDC42BPA-202ENST00000366764 TSPAN7P41732 249 aa10.27□□□□□ -0.77
CDC42BPA-202ENST00000366764 ZNF501Q96CX3 271 aaPredicted RBP10.27□□□□□ -0.77
CDC42BPA-202ENST00000366764 BET1LQ9NYM9 111 aa10.27□□□□□ -0.77
CDC42BPA-202ENST00000366764 J3QW42 95 aa10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 ARFGEF3Q5TH69 2177 aa10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 CRYABP02511 175 aaKnown RBP10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 FABP6P51161 128 aa10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 ARL16Q0P5N6 197 aa10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 TMEM252Q8N6L7 170 aa10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 R3HDM4Q96D70 268 aa10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 CCL28Q9NRJ3 127 aa10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 WNK1Q9H4A3 2382 aa10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 MLF1P58340 268 aa10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 PAX5Q02548 391 aa10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 PRDM14Q9GZV8 571 aa10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 A0A087WWC5 75 aa10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 BCL3P20749 454 aa10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 SLC22A18ASQ8N1D0 253 aa10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 TM2D1Q9BX74 207 aa10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 KCNMB2Q9Y691 235 aa10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 hADV38S2A0JD32 116 aa10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 SP1P08047 785 aa10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 EDN3P14138 238 aa10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 C9orf152Q5JTZ5 239 aa10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 FCGR3BO75015 233 aa10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 HAND1O96004 215 aa10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 IL9P15248 144 aa10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 ZNF708P17019 499 aa10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 C16orf47Q6ZP98 133 aaPredicted RBP10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 KIAA1324LA8MWY0 1029 aaPredicted RBP10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 MS4A18H0YCH9 400 aa10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 TBX6O95947 436 aaPredicted RBP10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 LGALS4P56470 323 aa10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 MS4A18Q3C1V0 323 aa10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 HNF1AP20823 631 aa10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 OR4C5Q8NGB2 326 aa10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 FAM103A1Q9BTL3 118 aaKnown RBP10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 AAMDCQ9H7C9 122 aa10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 PRR13Q9NZ81 148 aa10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 TREM2Q9NZC2 230 aa10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 BRS3P32247 399 aa10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 GLIPR1P48060 266 aa10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 ABLIM2Q6H8Q1 611 aa10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 ZNF383Q8NA42 475 aa10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 TPPP3Q9BW30 176 aa10.26□□□□□ -0.77
CDC42BPA-202ENST00000366764 OR5AU1Q8NGC0 362 aa10.25□□□□□ -0.77
CDC42BPA-202ENST00000366764 MS4A3Q96HJ5 214 aa10.25□□□□□ -0.77
CDC42BPA-202ENST00000366764 DEFB127Q9H1M4 99 aa10.25□□□□□ -0.77
CDC42BPA-202ENST00000366764 IL36GQ9NZH8 169 aa10.25□□□□□ -0.77
CDC42BPA-202ENST00000366764 PRRG2O14669 202 aa10.25□□□□□ -0.77
CDC42BPA-202ENST00000366764 OR3A1P47881 315 aa10.25□□□□□ -0.77
CDC42BPA-202ENST00000366764 VPS25Q9BRG1 176 aa10.25□□□□□ -0.77
CDC42BPA-202ENST00000366764 HIF1ANQ9NWT6 349 aa10.25□□□□□ -0.77
CDC42BPA-202ENST00000366764 H3BMH7 237 aa10.25□□□□□ -0.77
CDC42BPA-202ENST00000366764 TCFL5Q9UL49 500 aa10.25□□□□□ -0.77
CDC42BPA-202ENST00000366764 COX5BP10606 129 aa10.25□□□□□ -0.77
CDC42BPA-202ENST00000366764 IGFBP3P17936 291 aaPredicted RBP10.25□□□□□ -0.77
CDC42BPA-202ENST00000366764 MESP2Q0VG99 397 aa10.25□□□□□ -0.77
CDC42BPA-202ENST00000366764 PKIBQ9C010 78 aa10.25□□□□□ -0.77
CDC42BPA-202ENST00000366764 ATP5IP56385 69 aaPredicted RBP10.25□□□□□ -0.77
CDC42BPA-202ENST00000366764 ZNF658BQ4V348 819 aaPredicted RBP10.25□□□□□ -0.77
CDC42BPA-202ENST00000366764 RPL29P47914 159 aaKnown RBP10.25□□□□□ -0.77
CDC42BPA-202ENST00000366764 EGR4Q05215 589 aa10.25□□□□□ -0.77
CDC42BPA-202ENST00000366764 NRN1LQ496H8 165 aa10.25□□□□□ -0.77
CDC42BPA-202ENST00000366764 FAM209BQ5JX69 171 aa10.25□□□□□ -0.77
CDC42BPA-202ENST00000366764 SCCPDHQ8NBX0 429 aa10.25□□□□□ -0.77
CDC42BPA-202ENST00000366764 APCDD1LQ8NCL9 501 aa10.25□□□□□ -0.77
CDC42BPA-202ENST00000366764 DBX1A6NMT0 343 aa10.25□□□□□ -0.77
CDC42BPA-202ENST00000366764 FA2HQ7L5A8 372 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms