RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 TTC28Q96AY4 2481 aa12.01□□□□□ -0.49
COL6A1-201ENST00000361866 IGHV5-10-1A0A0J9YXX1 117 aa12.01□□□□□ -0.49
COL6A1-201ENST00000361866 MNX1P50219 401 aaPredicted RBP12.01□□□□□ -0.49
COL6A1-201ENST00000361866 RBMXL3Q8N7X1 1067 aaKnown RBP12.01□□□□□ -0.49
COL6A1-201ENST00000361866 C5orf63A6NC05 138 aa12.01□□□□□ -0.49
COL6A1-201ENST00000361866 LYZL6O75951 148 aa12.01□□□□□ -0.49
COL6A1-201ENST00000361866 S1PR3Q99500 378 aa12.01□□□□□ -0.49
COL6A1-201ENST00000361866 LOXL2Q9Y4K0 774 aa12.01□□□□□ -0.49
COL6A1-201ENST00000361866 CADP27708 2225 aa12.01□□□□□ -0.49
COL6A1-201ENST00000361866 DUXBA0A1W2PPF3 345 aa12□□□□□ -0.49
COL6A1-201ENST00000361866 B4DEV8 164 aa12□□□□□ -0.49
COL6A1-201ENST00000361866 GDF9O60383 454 aa12□□□□□ -0.49
COL6A1-201ENST00000361866 HSPB1P04792 205 aaKnown RBP12□□□□□ -0.49
COL6A1-201ENST00000361866 CASP6P55212 293 aa12□□□□□ -0.49
COL6A1-201ENST00000361866 CSRP2Q16527 193 aa12□□□□□ -0.49
COL6A1-201ENST00000361866 C22orf15Q8WYQ4 148 aa12□□□□□ -0.49
COL6A1-201ENST00000361866 GPR146Q96CH1 333 aa12□□□□□ -0.49
COL6A1-201ENST00000361866 OR4C12Q96R67 309 aa12□□□□□ -0.49
COL6A1-201ENST00000361866 TAAR9Q96RI9 348 aa12□□□□□ -0.49
COL6A1-201ENST00000361866 FKBP11Q9NYL4 201 aa12□□□□□ -0.49
COL6A1-201ENST00000361866 IGKV3D-11A0A0A0MRZ8 115 aa12□□□□□ -0.49
COL6A1-201ENST00000361866 C9JQL5 133 aa12□□□□□ -0.49
COL6A1-201ENST00000361866 SNRPCP09234 159 aaKnown RBP12□□□□□ -0.49
COL6A1-201ENST00000361866 NDUFB7P17568 137 aa12□□□□□ -0.49
COL6A1-201ENST00000361866 EPHA8P29322 1005 aaPredicted RBP12□□□□□ -0.49
COL6A1-201ENST00000361866 WDR74Q6RFH5 385 aaPredicted RBP12□□□□□ -0.49
COL6A1-201ENST00000361866 DPPA3Q6W0C5 159 aa12□□□□□ -0.49
COL6A1-201ENST00000361866 H1FOOQ8IZA3 346 aaPredicted RBP12□□□□□ -0.49
COL6A1-201ENST00000361866 ZNF524Q96C55 264 aa12□□□□□ -0.49
COL6A1-201ENST00000361866 LYRM2Q9NU23 88 aaPredicted RBP12□□□□□ -0.49
COL6A1-201ENST00000361866 TMEM30CPA0ZSE6 113 aa12□□□□□ -0.49
COL6A1-201ENST00000361866 NDUFS6O75380 124 aaKnown RBP12□□□□□ -0.49
COL6A1-201ENST00000361866 OR5G3P0C626 314 aa12□□□□□ -0.49
COL6A1-201ENST00000361866 PMELP40967 661 aa12□□□□□ -0.49
COL6A1-201ENST00000361866 SUMO1P63165 101 aaKnown RBP12□□□□□ -0.49
COL6A1-201ENST00000361866 FOXO1Q12778 655 aa12□□□□□ -0.49
COL6A1-201ENST00000361866 HIKESHIQ53FT3 197 aa12□□□□□ -0.49
COL6A1-201ENST00000361866 DTD1Q8TEA8 209 aa12□□□□□ -0.49
COL6A1-201ENST00000361866 TUBD1Q9UJT1 453 aa12□□□□□ -0.49
COL6A1-201ENST00000361866 M0R143 59 aa12□□□□□ -0.49
COL6A1-201ENST00000361866 TPPP2P59282 170 aa12□□□□□ -0.49
COL6A1-201ENST00000361866 SLC35B1P78383 322 aa12□□□□□ -0.49
COL6A1-201ENST00000361866 LRFN3Q9BTN0 628 aa12□□□□□ -0.49
COL6A1-201ENST00000361866 TMEM147Q9BVK8 224 aa12□□□□□ -0.49
COL6A1-201ENST00000361866 RBKSQ9H477 322 aa12□□□□□ -0.49
COL6A1-201ENST00000361866 TINAGQ9UJW2 476 aa12□□□□□ -0.49
COL6A1-201ENST00000361866 DMRT1Q9Y5R6 373 aa12□□□□□ -0.49
COL6A1-201ENST00000361866 ANAPC1Q9H1A4 1944 aa11.99□□□□□ -0.49
COL6A1-201ENST00000361866 CYB5R3P00387 301 aaPredicted RBP11.99□□□□□ -0.49
COL6A1-201ENST00000361866 IGHMP01871 453 aa11.99□□□□□ -0.49
COL6A1-201ENST00000361866 AMTP48728 403 aa11.99□□□□□ -0.49
COL6A1-201ENST00000361866 Q8WTZ3 238 aa11.99□□□□□ -0.49
COL6A1-201ENST00000361866 TREM2Q9NZC2 230 aa11.99□□□□□ -0.49
COL6A1-201ENST00000361866 LOC390937A0A1W2PQ73 354 aa11.99□□□□□ -0.49
COL6A1-201ENST00000361866 APOA2P02652 100 aa11.99□□□□□ -0.49
COL6A1-201ENST00000361866 FAM157CP0CG43 387 aa11.99□□□□□ -0.49
COL6A1-201ENST00000361866 OR1C1Q15619 314 aa11.99□□□□□ -0.49
COL6A1-201ENST00000361866 VAMP3Q15836 100 aa11.99□□□□□ -0.49
COL6A1-201ENST00000361866 SLC35E3Q7Z769 313 aa11.99□□□□□ -0.49
COL6A1-201ENST00000361866 CALHM1Q8IU99 346 aa11.99□□□□□ -0.49
COL6A1-201ENST00000361866 SELENOHQ8IZQ5 122 aaKnown RBP11.99□□□□□ -0.49
COL6A1-201ENST00000361866 SGMS2Q8NHU3 365 aa11.99□□□□□ -0.49
COL6A1-201ENST00000361866 TRIB1Q96RU8 372 aa11.99□□□□□ -0.49
COL6A1-201ENST00000361866 SMDT1Q9H4I9 107 aa11.99□□□□□ -0.49
COL6A1-201ENST00000361866 SLC35D1Q9NTN3 355 aa11.99□□□□□ -0.49
COL6A1-201ENST00000361866 SLC22A20A6NK97 555 aa11.99□□□□□ -0.49
COL6A1-201ENST00000361866 VSTM5A8MXK1 200 aa11.99□□□□□ -0.49
COL6A1-201ENST00000361866 HSBP1O75506 76 aa11.99□□□□□ -0.49
COL6A1-201ENST00000361866 MEF2BQ02080 365 aaPredicted RBP11.99□□□□□ -0.49
COL6A1-201ENST00000361866 OR2Y1Q8NGV0 311 aa11.99□□□□□ -0.49
COL6A1-201ENST00000361866 H1FXQ92522 213 aaKnown RBP11.99□□□□□ -0.49
COL6A1-201ENST00000361866 TWSG1Q9GZX9 223 aa11.99□□□□□ -0.49
COL6A1-201ENST00000361866 ZDHHC8Q9ULC8 765 aa11.99□□□□□ -0.49
COL6A1-201ENST00000361866 SHISA7A6NL88 538 aa11.98□□□□□ -0.49
COL6A1-201ENST00000361866 LDLRAD4O15165 306 aa11.98□□□□□ -0.49
COL6A1-201ENST00000361866 PGLYRP1O75594 196 aaPredicted RBP11.98□□□□□ -0.49
COL6A1-201ENST00000361866 CRISP2P16562 243 aa11.98□□□□□ -0.49
COL6A1-201ENST00000361866 THBS3P49746 956 aa11.98□□□□□ -0.49
COL6A1-201ENST00000361866 CARFQ8N187 725 aa11.98□□□□□ -0.49
COL6A1-201ENST00000361866 OR5D13Q8NGL4 314 aa11.98□□□□□ -0.49
COL6A1-201ENST00000361866 CMTM2Q8TAZ6 248 aa11.98□□□□□ -0.49
COL6A1-201ENST00000361866 MUCL1Q96DR8 90 aa11.98□□□□□ -0.49
COL6A1-201ENST00000361866 ACY3Q96HD9 319 aa11.98□□□□□ -0.49
COL6A1-201ENST00000361866 ACACAQ13085 2346 aa11.98□□□□□ -0.49
COL6A1-201ENST00000361866 COL4A6Q14031 1691 aa11.98□□□□□ -0.49
COL6A1-201ENST00000361866 A0A1B0GU03 582 aa11.98□□□□□ -0.49
COL6A1-201ENST00000361866 PATE3B3GLJ2 98 aa11.98□□□□□ -0.49
COL6A1-201ENST00000361866 C5orf24Q7Z6I8 188 aa11.98□□□□□ -0.49
COL6A1-201ENST00000361866 OR5B3Q8NH48 314 aa11.98□□□□□ -0.49
COL6A1-201ENST00000361866 WFDC1Q9HC57 220 aa11.98□□□□□ -0.49
COL6A1-201ENST00000361866 KCNIP2Q9NS61 270 aa11.98□□□□□ -0.49
COL6A1-201ENST00000361866 GYPAP02724 150 aa11.98□□□□□ -0.49
COL6A1-201ENST00000361866 IL11RAQ14626 422 aa11.98□□□□□ -0.49
COL6A1-201ENST00000361866 GFI1BQ5VTD9 330 aa11.98□□□□□ -0.49
COL6A1-201ENST00000361866 SF3B5Q9BWJ5 86 aaKnown RBP11.98□□□□□ -0.49
COL6A1-201ENST00000361866 COA4Q9NYJ1 87 aa11.98□□□□□ -0.49
COL6A1-201ENST00000361866 SPNS3Q6ZMD2 512 aa11.97□□□□□ -0.49
COL6A1-201ENST00000361866 M1APQ8TC57 530 aa11.97□□□□□ -0.49
COL6A1-201ENST00000361866 VN1R17PQ8TDU5 208 aa11.97□□□□□ -0.49
COL6A1-201ENST00000361866 NUDT16L1Q9BRJ7 211 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms