RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 LINC01590Q5TEZ4 76 aa11.64□□□□□ -0.55
LDB3-202ENST00000361373 MYPOPQ86VE0 399 aaPredicted RBP11.64□□□□□ -0.55
LDB3-202ENST00000361373 NHLRC2Q8NBF2 726 aa11.64□□□□□ -0.55
LDB3-202ENST00000361373 CORTO00230 105 aa11.64□□□□□ -0.55
LDB3-202ENST00000361373 ATXN7O15265 892 aaPredicted RBP11.64□□□□□ -0.55
LDB3-202ENST00000361373 FAM106CPP0CH98 169 aa11.64□□□□□ -0.55
LDB3-202ENST00000361373 PTGDSP41222 190 aa11.64□□□□□ -0.55
LDB3-202ENST00000361373 COMPP49747 757 aaPredicted RBP11.64□□□□□ -0.55
LDB3-202ENST00000361373 TNFSF10P50591 281 aa11.64□□□□□ -0.55
LDB3-202ENST00000361373 DEFA6Q01524 100 aa11.64□□□□□ -0.55
LDB3-202ENST00000361373 UNQ9370/PRO34162Q6UXP9 181 aa11.64□□□□□ -0.55
LDB3-202ENST00000361373 MRGPRGQ86SM5 289 aa11.64□□□□□ -0.55
LDB3-202ENST00000361373 ZNF488Q96MN9 340 aa11.64□□□□□ -0.55
LDB3-202ENST00000361373 GYPAP02724 150 aa11.64□□□□□ -0.55
LDB3-202ENST00000361373 GLRXP35754 106 aa11.64□□□□□ -0.55
LDB3-202ENST00000361373 COX19Q49B96 90 aa11.64□□□□□ -0.55
LDB3-202ENST00000361373 CALHM1Q8IU99 346 aa11.64□□□□□ -0.55
LDB3-202ENST00000361373 ABHD14BQ96IU4 210 aa11.64□□□□□ -0.55
LDB3-202ENST00000361373 WFDC6Q9BQY6 131 aa11.64□□□□□ -0.55
LDB3-202ENST00000361373 SLC25A22Q9H936 323 aa11.64□□□□□ -0.55
LDB3-202ENST00000361373 CNOT1A5YKK6 2376 aaKnown RBP11.64□□□□□ -0.55
LDB3-202ENST00000361373 CACNA1EQ15878 2313 aa11.64□□□□□ -0.55
LDB3-202ENST00000361373 EGR4Q05215 589 aa11.64□□□□□ -0.55
LDB3-202ENST00000361373 SPINK9Q5DT21 86 aa11.64□□□□□ -0.55
LDB3-202ENST00000361373 H0Y980 276 aa11.63□□□□□ -0.55
LDB3-202ENST00000361373 GATCO43716 136 aaKnown RBP11.63□□□□□ -0.55
LDB3-202ENST00000361373 TMEM50BP56557 158 aa11.63□□□□□ -0.55
LDB3-202ENST00000361373 PAFAH1B2P68402 229 aa11.63□□□□□ -0.55
LDB3-202ENST00000361373 ZFP36L1Q07352 338 aaKnown RBP11.63□□□□□ -0.55
LDB3-202ENST00000361373 OR1B1Q8NGR6 318 aa11.63□□□□□ -0.55
LDB3-202ENST00000361373 PIMREGQ9BSJ6 248 aa11.63□□□□□ -0.55
LDB3-202ENST00000361373 TMEM208Q9BTX3 173 aa11.63□□□□□ -0.55
LDB3-202ENST00000361373 NKX2-6A6NCS4 301 aa11.63□□□□□ -0.55
LDB3-202ENST00000361373 NTF3P20783 257 aa11.63□□□□□ -0.55
LDB3-202ENST00000361373 SLC25A53Q5H9E4 307 aa11.63□□□□□ -0.55
LDB3-202ENST00000361373 PITPNC1Q9UKF7 332 aa11.63□□□□□ -0.55
LDB3-202ENST00000361373 KCNK7Q9Y2U2 307 aa11.63□□□□□ -0.55
LDB3-202ENST00000361373 ICE1Q9Y2F5 2266 aa11.63□□□□□ -0.55
LDB3-202ENST00000361373 TDRD6O60522 2096 aaKnown RBP11.63□□□□□ -0.55
LDB3-202ENST00000361373 ODAMA1E959 279 aa11.63□□□□□ -0.55
LDB3-202ENST00000361373 SPINK2P20155 84 aa11.63□□□□□ -0.55
LDB3-202ENST00000361373 ZP3P21754 424 aa11.63□□□□□ -0.55
LDB3-202ENST00000361373 ZNF79Q15937 498 aa11.63□□□□□ -0.55
LDB3-202ENST00000361373 TEPPQ6URK8 271 aa11.63□□□□□ -0.55
LDB3-202ENST00000361373 LYZL2Q7Z4W2 148 aa11.63□□□□□ -0.55
LDB3-202ENST00000361373 RFLNBQ8N5W9 214 aa11.63□□□□□ -0.55
LDB3-202ENST00000361373 SCMH1Q96GD3 660 aa11.63□□□□□ -0.55
LDB3-202ENST00000361373 LPAR2Q9HBW0 351 aa11.63□□□□□ -0.55
LDB3-202ENST00000361373 RGS13O14921 159 aa11.63□□□□□ -0.55
LDB3-202ENST00000361373 KLK13Q9UKR3 277 aa11.63□□□□□ -0.55
LDB3-202ENST00000361373 PSG2P11465 335 aa11.62□□□□□ -0.55
LDB3-202ENST00000361373 G6PCP35575 357 aa11.62□□□□□ -0.55
LDB3-202ENST00000361373 MMD2Q8IY49 270 aa11.62□□□□□ -0.55
LDB3-202ENST00000361373 OR8I2Q8N0Y5 310 aa11.62□□□□□ -0.55
LDB3-202ENST00000361373 FADS6Q8N9I5 356 aa11.62□□□□□ -0.55
LDB3-202ENST00000361373 CLCF1Q9UBD9 225 aa11.62□□□□□ -0.55
LDB3-202ENST00000361373 A0A0G2JMZ2 1700 aa11.62□□□□□ -0.55
LDB3-202ENST00000361373 LRRC37A2A6NM11 1700 aa11.62□□□□□ -0.55
LDB3-202ENST00000361373 TRAV39A0A0B4J263 110 aa11.62□□□□□ -0.55
LDB3-202ENST00000361373 H0Y8G0 127 aa11.62□□□□□ -0.55
LDB3-202ENST00000361373 NAT2P11245 290 aa11.62□□□□□ -0.55
LDB3-202ENST00000361373 RPL27AP46776 148 aaKnown RBP11.62□□□□□ -0.55
LDB3-202ENST00000361373 KLF4O43474 513 aa11.62□□□□□ -0.55
LDB3-202ENST00000361373 HSBP1O75506 76 aa11.62□□□□□ -0.55
LDB3-202ENST00000361373 EWSR1Q01844 656 aaKnown RBP eCLIP11.62□□□□□ -0.55
LDB3-202ENST00000361373 FA2HQ7L5A8 372 aa11.62□□□□□ -0.55
LDB3-202ENST00000361373 SIGLEC12Q96PQ1 595 aa11.62□□□□□ -0.55
LDB3-202ENST00000361373 DOK5Q9P104 306 aa11.62□□□□□ -0.55
LDB3-202ENST00000361373 OR51B2Q9Y5P1 312 aa11.62□□□□□ -0.55
LDB3-202ENST00000361373 C7orf66A4D0T2 115 aa11.62□□□□□ -0.55
LDB3-202ENST00000361373 ZNF708P17019 499 aa11.62□□□□□ -0.55
LDB3-202ENST00000361373 BLNKQ8WV28 456 aa11.62□□□□□ -0.55
LDB3-202ENST00000361373 ASCL3Q9NQ33 180 aa11.62□□□□□ -0.55
LDB3-202ENST00000361373 G6PC2Q9NQR9 355 aa11.62□□□□□ -0.55
LDB3-202ENST00000361373 WASHC3Q9Y3C0 194 aa11.62□□□□□ -0.55
LDB3-202ENST00000361373 HLA-DQB1P01920 261 aa11.61□□□□□ -0.55
LDB3-202ENST00000361373 ANKRD55Q3KP44 614 aa11.61□□□□□ -0.55
LDB3-202ENST00000361373 FAM57AQ8TBR7 257 aa11.61□□□□□ -0.55
LDB3-202ENST00000361373 DLL3Q9NYJ7 618 aa11.61□□□□□ -0.55
LDB3-202ENST00000361373 LEUTXA8MZ59 168 aa11.61□□□□□ -0.55
LDB3-202ENST00000361373 MPDU1O75352 247 aa11.61□□□□□ -0.55
LDB3-202ENST00000361373 ARG1P05089 322 aa11.61□□□□□ -0.55
LDB3-202ENST00000361373 SEC11BP0C7V7 166 aa11.61□□□□□ -0.55
LDB3-202ENST00000361373 ZNF345Q14585 488 aa11.61□□□□□ -0.55
LDB3-202ENST00000361373 FAM78BQ5VT40 261 aa11.61□□□□□ -0.55
LDB3-202ENST00000361373 HDHD3Q9BSH5 251 aaPredicted RBP11.61□□□□□ -0.55
LDB3-202ENST00000361373 JPT1Q9UK76 154 aa11.61□□□□□ -0.55
LDB3-202ENST00000361373 EP300Q09472 2414 aaPredicted RBP11.61□□□□□ -0.55
LDB3-202ENST00000361373 ZFC3H1O60293 1989 aaKnown RBP11.61□□□□□ -0.55
LDB3-202ENST00000361373 PSME4Q14997 1843 aa11.61□□□□□ -0.55
LDB3-202ENST00000361373 SPCS3P61009 180 aa11.61□□□□□ -0.55
LDB3-202ENST00000361373 SLC35B1P78383 322 aa11.61□□□□□ -0.55
LDB3-202ENST00000361373 WDR73Q6P4I2 378 aa11.61□□□□□ -0.55
LDB3-202ENST00000361373 DPPA3Q6W0C5 159 aa11.61□□□□□ -0.55
LDB3-202ENST00000361373 ZNF645Q8N7E2 425 aa11.61□□□□□ -0.55
LDB3-202ENST00000361373 IDI2-AS1Q9NZ38 188 aa11.61□□□□□ -0.55
LDB3-202ENST00000361373 RBFOX3A6NFN3 312 aa11.61□□□□□ -0.55
LDB3-202ENST00000361373 PDLIM4P50479 330 aa11.61□□□□□ -0.55
LDB3-202ENST00000361373 SELENOTP62341 195 aa11.61□□□□□ -0.55
LDB3-202ENST00000361373 NAAAQ02083 359 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms