RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 FAM185AQ8N0U4 392 aa11.12□□□□□ -0.63
SQSTM1-201ENST00000360718 FBXL14Q8N1E6 418 aa11.12□□□□□ -0.63
SQSTM1-201ENST00000360718 C15orf54Q8N8G6 183 aa11.12□□□□□ -0.63
SQSTM1-201ENST00000360718 MOB3AQ96BX8 217 aa11.12□□□□□ -0.63
SQSTM1-201ENST00000360718 CXXC4Q9H2H0 198 aa11.12□□□□□ -0.63
SQSTM1-201ENST00000360718 LIME1Q9H400 295 aa11.12□□□□□ -0.63
SQSTM1-201ENST00000360718 SLC2A9Q9NRM0 540 aa11.12□□□□□ -0.63
SQSTM1-201ENST00000360718 STRAPQ9Y3F4 350 aaKnown RBP11.12□□□□□ -0.63
SQSTM1-201ENST00000360718 TMED3Q9Y3Q3 217 aa11.12□□□□□ -0.63
SQSTM1-201ENST00000360718 FLNCQ14315 2725 aa11.12□□□□□ -0.63
SQSTM1-201ENST00000360718 CRYBA1P05813 215 aa11.11□□□□□ -0.63
SQSTM1-201ENST00000360718 DANCRP0C864 163 aa11.11□□□□□ -0.63
SQSTM1-201ENST00000360718 BCL3P20749 454 aa11.11□□□□□ -0.63
SQSTM1-201ENST00000360718 NFYBP25208 207 aa11.11□□□□□ -0.63
SQSTM1-201ENST00000360718 PAX6P26367 422 aa11.11□□□□□ -0.63
SQSTM1-201ENST00000360718 GNMTQ14749 295 aa11.11□□□□□ -0.63
SQSTM1-201ENST00000360718 LYZL2Q7Z4W2 148 aa11.11□□□□□ -0.63
SQSTM1-201ENST00000360718 RXFP4Q8TDU9 374 aa11.11□□□□□ -0.63
SQSTM1-201ENST00000360718 GINS3Q9BRX5 216 aa11.11□□□□□ -0.63
SQSTM1-201ENST00000360718 ATP23Q9Y6H3 246 aa11.11□□□□□ -0.63
SQSTM1-201ENST00000360718 PRSS44E7EML9 344 aa11.11□□□□□ -0.63
SQSTM1-201ENST00000360718 H0YL77 283 aa11.11□□□□□ -0.63
SQSTM1-201ENST00000360718 GRPP07492 148 aa11.11□□□□□ -0.63
SQSTM1-201ENST00000360718 OR8U9P0C7N5 309 aa11.11□□□□□ -0.63
SQSTM1-201ENST00000360718 FUT3P21217 361 aa11.11□□□□□ -0.63
SQSTM1-201ENST00000360718 NPBWR2P48146 333 aa11.11□□□□□ -0.63
SQSTM1-201ENST00000360718 RBM11P57052 281 aaKnown RBP11.11□□□□□ -0.63
SQSTM1-201ENST00000360718 RAB5BP61020 215 aa11.11□□□□□ -0.63
SQSTM1-201ENST00000360718 TFF3Q07654 80 aa11.11□□□□□ -0.63
SQSTM1-201ENST00000360718 PHLDA2Q53GA4 152 aa11.11□□□□□ -0.63
SQSTM1-201ENST00000360718 OR8U1Q8NH10 309 aa11.11□□□□□ -0.63
SQSTM1-201ENST00000360718 LINC01560Q8TB33 94 aa11.11□□□□□ -0.63
SQSTM1-201ENST00000360718 ERGIC1Q969X5 290 aa11.11□□□□□ -0.63
SQSTM1-201ENST00000360718 C12orf57Q99622 126 aa11.11□□□□□ -0.63
SQSTM1-201ENST00000360718 RSRP1Q9BUV0 290 aa11.11□□□□□ -0.63
SQSTM1-201ENST00000360718 PLK3Q9H4B4 646 aa11.11□□□□□ -0.63
SQSTM1-201ENST00000360718 MSL2Q9HCI7 577 aa11.11□□□□□ -0.63
SQSTM1-201ENST00000360718 PLA2G2EQ9NZK7 142 aa11.11□□□□□ -0.63
SQSTM1-201ENST00000360718 ZNF462Q96JM2 2506 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 MLNRO43193 412 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 SYNGR1O43759 233 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 ZG16O60844 167 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 IFNA4P05014 189 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 GLAP06280 429 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 SPP1P10451 314 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 FOLR2P14207 255 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 SNCAP37840 140 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 RPL35P42766 123 aaKnown RBP11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 CAMLGP49069 296 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 FGF12P61328 243 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 PIGYQ3MUY2 71 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 Q6ZR03 302 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 WDR86Q86TI4 376 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 Q8IYB0 196 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 SCCPDHQ8NBX0 429 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 Q8NFD4 153 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 DMBX1Q8NFW5 382 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 AKR1E2Q96JD6 320 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 ZNF442Q9H7R0 627 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 MTCH1Q9NZJ7 389 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 CACFD1Q9UGQ2 172 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 IGLV3-9A0A075B6K5 115 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 FAM90A10PA6NDY2 464 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 FAM90A18PA6NE21 464 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 FAM90A16PA6NEW6 464 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 FAM90A20PA6NIJ5 464 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 FAM90A8PA6NJQ4 464 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 FAM90A7PA6NKC0 464 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 FAM90A22PA8MWA6 464 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 FAM90A12PA8MX19 464 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 FAM90A5PA8MXJ8 464 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 FAM90A23PA8MXZ1 464 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 C3orf80F5H4A9 247 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 PHF1O43189 567 aaPredicted RBP11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 DIRAS3O95661 229 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 FAM90A15PP0C7V4 464 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 FAM90A13PP0C7W8 464 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 FAM90A14PP0C7W9 464 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 FAM90A24PP0C7X0 464 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 ZNF154Q13106 437 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 MIDNQ504T8 468 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 BATF2Q8N1L9 274 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 OR2Z1Q8NG97 314 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 GTF3AQ92664 365 aaKnown RBP11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 MSI2Q96DH6 328 aaKnown RBP11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 PBDC1Q9BVG4 233 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 COA4Q9NYJ1 87 aa11.1□□□□□ -0.63
SQSTM1-201ENST00000360718 IGHV3-64DA0A0J9YX35 117 aa11.09□□□□□ -0.63
SQSTM1-201ENST00000360718 MEX3AA1L020 520 aaKnown RBP11.09□□□□□ -0.63
SQSTM1-201ENST00000360718 COLCA2A8K830 154 aa11.09□□□□□ -0.63
SQSTM1-201ENST00000360718 FAM157AC9JC47 383 aa11.09□□□□□ -0.63
SQSTM1-201ENST00000360718 C1QL1O75973 258 aa11.09□□□□□ -0.63
SQSTM1-201ENST00000360718 PRH1P02810 166 aa11.09□□□□□ -0.63
SQSTM1-201ENST00000360718 PPT1P50897 306 aa11.09□□□□□ -0.63
SQSTM1-201ENST00000360718 ZNF616Q08AN1 781 aa11.09□□□□□ -0.63
SQSTM1-201ENST00000360718 GUK1Q16774 197 aa11.09□□□□□ -0.63
SQSTM1-201ENST00000360718 NCMAPQ5T1S8 102 aa11.09□□□□□ -0.63
SQSTM1-201ENST00000360718 ZNF581Q9P0T4 197 aa11.09□□□□□ -0.63
SQSTM1-201ENST00000360718 TAAR3PQ9P1P4 343 aa11.09□□□□□ -0.63
SQSTM1-201ENST00000360718 A0A1B0GWJ7 208 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms