RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 LNP1A1A4G5 178 aa6.19□□□□□ -1.42
CLCN3-202ENST00000360642 CGB1A6NKQ9 187 aa6.19□□□□□ -1.42
CLCN3-202ENST00000360642 PHF1O43189 567 aaPredicted RBP6.19□□□□□ -1.42
CLCN3-202ENST00000360642 DIRAS3O95661 229 aa6.19□□□□□ -1.42
CLCN3-202ENST00000360642 SEC11BP0C7V7 166 aa6.19□□□□□ -1.42
CLCN3-202ENST00000360642 GPM6AP51674 278 aa6.19□□□□□ -1.42
CLCN3-202ENST00000360642 RND3P61587 244 aa6.19□□□□□ -1.42
CLCN3-202ENST00000360642 HFEQ30201 348 aa6.19□□□□□ -1.42
CLCN3-202ENST00000360642 C9orf135Q5VTT2 229 aa6.19□□□□□ -1.42
CLCN3-202ENST00000360642 TMEM88Q6PEY1 159 aa6.19□□□□□ -1.42
CLCN3-202ENST00000360642 ZDHHC23Q8IYP9 409 aa6.19□□□□□ -1.42
CLCN3-202ENST00000360642 TMEM251Q8N6I4 163 aa6.19□□□□□ -1.42
CLCN3-202ENST00000360642 SLC35G3Q8N808 338 aa6.19□□□□□ -1.42
CLCN3-202ENST00000360642 TMEM56Q96MV1 263 aa6.19□□□□□ -1.42
CLCN3-202ENST00000360642 SMIM3Q9BZL3 60 aa6.19□□□□□ -1.42
CLCN3-202ENST00000360642 TMEM222Q9H0R3 208 aa6.19□□□□□ -1.42
CLCN3-202ENST00000360642 NDRG3Q9UGV2 375 aa6.19□□□□□ -1.42
CLCN3-202ENST00000360642 TMEM56-RWDD3S4R434 201 aa6.19□□□□□ -1.42
CLCN3-202ENST00000360642 LINC00473A8K010 186 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 FAM166BA8MTA8 275 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 C9JQL5 133 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 TECTAO75443 2155 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 SYNGR4O95473 234 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 NGFP01138 241 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 DANCRP0C864 163 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 SPP1P10451 314 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 CCNOP22674 350 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 LMO1P25800 156 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 ARR3P36575 388 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 NPBWR1P48145 328 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 NOVA1P51513 510 aaKnown RBP6.18□□□□□ -1.42
CLCN3-202ENST00000360642 HERV-K104P61576 105 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 HERPUD1Q15011 391 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 MPV17LQ2QL34 196 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 Q6ZRG5 221 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 OR5A2Q8NGI9 324 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 WWC2-AS2Q96NR7 200 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 SCRT1Q9BWW7 348 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 PRELID1Q9Y255 219 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 KNTC1P50748 2209 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 DSPP15924 2871 aaKnown RBP6.18□□□□□ -1.42
CLCN3-202ENST00000360642 DOCK7Q96N67 2140 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 TRDCB7Z8K6 153 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 NPIPB11E5RHQ5 1161 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 ST8SIA3O43173 380 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 CDS2O95674 445 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 HEXAP06865 529 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 ADH4P08319 380 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 SCTP09683 121 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 SFTA3P0C7M3 94 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 CD59P13987 128 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 DVL1P1P54792 670 aaPredicted RBP6.18□□□□□ -1.42
CLCN3-202ENST00000360642 BEAN1Q3B7T3 259 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 TEX38Q6PEX7 206 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 FBXW12Q6X9E4 464 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 MRPL21Q7Z2W9 205 aaKnown RBP6.18□□□□□ -1.42
CLCN3-202ENST00000360642 CBLN2Q8IUK8 224 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 GTF3AQ92664 365 aaKnown RBP6.18□□□□□ -1.42
CLCN3-202ENST00000360642 APH1AQ96BI3 265 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 FAM212BQ9NTI7 297 aaPredicted RBP6.18□□□□□ -1.42
CLCN3-202ENST00000360642 ABI3Q9P2A4 366 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 IL36RNQ9UBH0 155 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 RCL1Q9Y2P8 373 aaKnown RBP6.18□□□□□ -1.42
CLCN3-202ENST00000360642 FREM1Q5H8C1 2179 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 ZNF732B4DXR9 585 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 NDUFA2O43678 99 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 OR8U9P0C7N5 309 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 SRPXP78539 464 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 FLI1Q01543 452 aaPredicted RBP6.18□□□□□ -1.42
CLCN3-202ENST00000360642 RNPS1Q15287 305 aaKnown RBP6.18□□□□□ -1.42
CLCN3-202ENST00000360642 HAGHLQ6PII5 290 aaPredicted RBP6.18□□□□□ -1.42
CLCN3-202ENST00000360642 ZNF818PQ6ZRF7 136 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 DPPA2Q7Z7J5 298 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 TBC1D26Q86UD7 250 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 MKXQ8IYA7 352 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 OR8U1Q8NH10 309 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 OR5P3Q8WZ94 311 aa6.18□□□□□ -1.42
CLCN3-202ENST00000360642 TRBV6-6A0A0A6YYG2 114 aa6.17□□□□□ -1.42
CLCN3-202ENST00000360642 IGKV1-6A0A0C4DH72 117 aa6.17□□□□□ -1.42
CLCN3-202ENST00000360642 CLEC18AA5D8T8 446 aa6.17□□□□□ -1.42
CLCN3-202ENST00000360642 NKX2-6A6NCS4 301 aa6.17□□□□□ -1.42
CLCN3-202ENST00000360642 SLC22A20A6NK97 555 aa6.17□□□□□ -1.42
CLCN3-202ENST00000360642 ITGA3P26006 1051 aa6.17□□□□□ -1.42
CLCN3-202ENST00000360642 SNCAP37840 140 aa6.17□□□□□ -1.42
CLCN3-202ENST00000360642 LINC00696Q6ZRV3 163 aa6.17□□□□□ -1.42
CLCN3-202ENST00000360642 NUFIP2Q7Z417 695 aaKnown RBP6.17□□□□□ -1.42
CLCN3-202ENST00000360642 LINC00596Q86U02 117 aa6.17□□□□□ -1.42
CLCN3-202ENST00000360642 SELENOHQ8IZQ5 122 aaKnown RBP6.17□□□□□ -1.42
CLCN3-202ENST00000360642 DEFB123Q8N688 67 aa6.17□□□□□ -1.42
CLCN3-202ENST00000360642 CLEC18CQ8NCF0 446 aa6.17□□□□□ -1.42
CLCN3-202ENST00000360642 MDS2Q8NDY4 140 aa6.17□□□□□ -1.42
CLCN3-202ENST00000360642 BOD1Q96IK1 185 aa6.17□□□□□ -1.42
CLCN3-202ENST00000360642 DCHS1Q96JQ0 3298 aa6.17□□□□□ -1.42
CLCN3-202ENST00000360642 BORCS7-ASMTA0A0B4J1R7 106 aa6.17□□□□□ -1.42
CLCN3-202ENST00000360642 IGKV1D-13A0A0B4J2D9 117 aa6.17□□□□□ -1.42
CLCN3-202ENST00000360642 MARCH11A6NNE9 402 aa6.17□□□□□ -1.42
CLCN3-202ENST00000360642 CD300LBA8K4G0 201 aa6.17□□□□□ -1.42
CLCN3-202ENST00000360642 TRAPPC2LH3BP13 241 aa6.17□□□□□ -1.42
CLCN3-202ENST00000360642 CDX4O14627 284 aaPredicted RBP6.17□□□□□ -1.42
CLCN3-202ENST00000360642 SYNGR1O43759 233 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms