RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 P2RY6Q15077 328 aa8.5□□□□□ -1.05
CUX1-203ENST00000360264 PRKNO60260 465 aaPredicted RBP8.5□□□□□ -1.05
CUX1-203ENST00000360264 OR1N2Q8NGR9 330 aa8.5□□□□□ -1.05
CUX1-203ENST00000360264 CDC42EP3Q9UKI2 254 aa8.5□□□□□ -1.05
CUX1-203ENST00000360264 ZMIZ1Q9ULJ6 1067 aa8.5□□□□□ -1.05
CUX1-203ENST00000360264 WNT3P56703 355 aa8.5□□□□□ -1.05
CUX1-203ENST00000360264 TXNDC17Q9BRA2 123 aa8.5□□□□□ -1.05
CUX1-203ENST00000360264 FAM181BA6NEQ2 426 aa8.5□□□□□ -1.05
CUX1-203ENST00000360264 LINC01565O15544 149 aa8.5□□□□□ -1.05
CUX1-203ENST00000360264 AKR7A2O43488 359 aa8.5□□□□□ -1.05
CUX1-203ENST00000360264 SYNGR2O43760 224 aa8.5□□□□□ -1.05
CUX1-203ENST00000360264 CDX2Q99626 313 aaPredicted RBP8.5□□□□□ -1.05
CUX1-203ENST00000360264 WNT1P04628 370 aa8.5□□□□□ -1.05
CUX1-203ENST00000360264 BTF3P20290 206 aaKnown RBP8.5□□□□□ -1.05
CUX1-203ENST00000360264 RELQ04864 619 aaPredicted RBP8.5□□□□□ -1.05
CUX1-203ENST00000360264 ZNF714Q96N38 554 aa8.5□□□□□ -1.05
CUX1-203ENST00000360264 SRD5A3Q9H8P0 318 aa8.5□□□□□ -1.05
CUX1-203ENST00000360264 TECTAO75443 2155 aa8.5□□□□□ -1.05
CUX1-203ENST00000360264 FAM109BQ6ICB4 259 aaPredicted RBP8.5□□□□□ -1.05
CUX1-203ENST00000360264 TMEM179BQ7Z7N9 219 aa8.5□□□□□ -1.05
CUX1-203ENST00000360264 PMELP40967 661 aa8.5□□□□□ -1.05
CUX1-203ENST00000360264 GALNT14Q96FL9 552 aa8.5□□□□□ -1.05
CUX1-203ENST00000360264 COX14Q96I36 57 aa8.5□□□□□ -1.05
CUX1-203ENST00000360264 SMDT1Q9H4I9 107 aa8.5□□□□□ -1.05
CUX1-203ENST00000360264 TMEM56-RWDD3S4R434 201 aa8.5□□□□□ -1.05
CUX1-203ENST00000360264 UNQ9370/PRO34162Q6UXP9 181 aa8.49□□□□□ -1.05
CUX1-203ENST00000360264 ZNF519Q8TB69 540 aa8.49□□□□□ -1.05
CUX1-203ENST00000360264 ZNF256Q9Y2P7 627 aaPredicted RBP8.49□□□□□ -1.05
CUX1-203ENST00000360264 ZNF738Q8NE65 137 aa8.49□□□□□ -1.05
CUX1-203ENST00000360264 OR51B2Q9Y5P1 312 aa8.49□□□□□ -1.05
CUX1-203ENST00000360264 NCKAP5O14513 1909 aa8.49□□□□□ -1.05
CUX1-203ENST00000360264 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.49□□□□□ -1.05
CUX1-203ENST00000360264 PF4V1P10720 104 aa8.49□□□□□ -1.05
CUX1-203ENST00000360264 HTN1P15515 57 aa8.49□□□□□ -1.05
CUX1-203ENST00000360264 TMEM78Q5T7P6 136 aa8.49□□□□□ -1.05
CUX1-203ENST00000360264 TMEM37Q8WXS4 190 aa8.49□□□□□ -1.05
CUX1-203ENST00000360264 UBR3Q6ZT12 1888 aa8.49□□□□□ -1.05
CUX1-203ENST00000360264 SHISA8B8ZZ34 492 aa8.49□□□□□ -1.05
CUX1-203ENST00000360264 MC5RP33032 325 aa8.49□□□□□ -1.05
CUX1-203ENST00000360264 INPP5JQ15735 1006 aaPredicted RBP8.49□□□□□ -1.05
CUX1-203ENST00000360264 DDA1Q9BW61 102 aa8.49□□□□□ -1.05
CUX1-203ENST00000360264 ANKRD34AQ69YU3 496 aa8.49□□□□□ -1.05
CUX1-203ENST00000360264 ZG16BQ96DA0 208 aa8.49□□□□□ -1.05
CUX1-203ENST00000360264 TGFBR1P36897 503 aa8.49□□□□□ -1.05
CUX1-203ENST00000360264 OR10J6PQ8NGY7 276 aa8.49□□□□□ -1.05
CUX1-203ENST00000360264 ZFHX2Q9C0A1 2572 aaPredicted RBP8.49□□□□□ -1.05
CUX1-203ENST00000360264 KIAA1551Q9HCM1 1747 aa8.49□□□□□ -1.05
CUX1-203ENST00000360264 MT-ND6P03923 174 aa8.49□□□□□ -1.05
CUX1-203ENST00000360264 DMKNQ6E0U4 476 aaPredicted RBP8.49□□□□□ -1.05
CUX1-203ENST00000360264 PWWP2BQ6NUJ5 590 aa8.49□□□□□ -1.05
CUX1-203ENST00000360264 SYNGR1O43759 233 aa8.49□□□□□ -1.05
CUX1-203ENST00000360264 TP53RKQ96S44 253 aa8.49□□□□□ -1.05
CUX1-203ENST00000360264 SH3BGRL3Q9H299 93 aa8.49□□□□□ -1.05
CUX1-203ENST00000360264 TANC2Q9HCD6 1990 aa8.49□□□□□ -1.05
CUX1-203ENST00000360264 C9orf172C9J069 976 aa8.49□□□□□ -1.05
CUX1-203ENST00000360264 C9orf50Q5SZB4 431 aa8.49□□□□□ -1.05
CUX1-203ENST00000360264 LAMTOR1Q6IAA8 161 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 HPRT1P00492 218 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 SELENOTP62341 195 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 ZXDAP98168 799 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 ABHD1Q96SE0 405 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 TMEM189A5PLL7 270 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 ZNF253O75346 499 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 NGFRP08138 427 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 FAM106AQ4KMX7 169 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 AWAT1Q58HT5 328 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 Q6ZS52 159 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 C6orf201Q7Z4U5 140 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 C5orf67F2Z3F1 127 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 ZNF345Q14585 488 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 TEX30Q5JUR7 227 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 PCGF1Q9BSM1 259 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 PRSS50Q9UI38 385 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 CTXND1A0A1B0GTU2 59 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 DMRTC1Q5HYR2 192 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 PLPPR2Q96GM1 343 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 OR2J1Q9GZK6 312 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 H0Y980 276 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 SPINK4O60575 86 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 PAPPA-AS1Q5QFB9 102 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 FAM27D1Q5T7N8 215 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 MARVELD1Q9BSK0 173 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 OR2W5A6NFC9 320 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 DNAL4O96015 105 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 CTGFP29279 349 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 JOSD1Q15040 202 aaPredicted RBP8.48□□□□□ -1.05
CUX1-203ENST00000360264 MNX1P50219 401 aaPredicted RBP8.48□□□□□ -1.05
CUX1-203ENST00000360264 BPIFA4PQ86YQ2 179 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 WNT2BQ93097 391 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 NHSL1Q5SYE7 1610 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 DHRS7CA6NNS2 312 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 CEACAM18A8MTB9 384 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 MGPP08493 103 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 STPG2Q8N412 459 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 ABHD3Q8WU67 409 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 RAX2Q96IS3 184 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 LRRC3BQ96PB8 259 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 SCNM1Q9BWG6 230 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 LIPGQ9Y5X9 500 aa8.48□□□□□ -1.05
CUX1-203ENST00000360264 TCRBV16S1A1N1A0A5B0 115 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms