RNA–Protein interactions for RNA: ENST00000358808.6

CLIP1-202, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLIP1, Length 5,880 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-202ENST00000358808 SNURFLB1AK76 121 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 C21orf140B9A014 251 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 K7ERU9 68 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 TSPO2Q5TGU0 170 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 LHFPL5Q8TAF8 219 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 ADAMTS17Q8TE56 1095 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 ZNF275Q9NSD4 429 aaPredicted RBP8.92□□□□□ -0.98
CLIP1-202ENST00000358808 SERGEFQ9UGK8 458 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 RAB29O14966 203 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 PDE6DO43924 150 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 NDUFB6O95139 128 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 RECKO95980 971 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 GAPDHP04406 335 aaKnown RBP8.92□□□□□ -0.98
CLIP1-202ENST00000358808 SNRPCP09234 159 aaKnown RBP8.92□□□□□ -0.98
CLIP1-202ENST00000358808 ATP5G2Q06055 141 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 GAPTQ8N292 157 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 OR8B12Q8NGG6 310 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 MYO7AQ13402 2215 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 TMEM210A6NLX4 147 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 PAGE4O60829 102 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 RAC3P60763 192 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 PSG6Q00889 435 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 AESQ08117 197 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 ABHD14BQ96IU4 210 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 ELOVL1Q9BW60 279 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 ZDHHC8Q9ULC8 765 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 LOXHD1Q8IVV2 1947 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 THY1P04216 161 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 CD99P14209 185 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 MFAP4P55083 255 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 CD81P60033 236 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 NKG7Q16617 165 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 LBHQ53QV2 105 aaPredicted RBP8.92□□□□□ -0.98
CLIP1-202ENST00000358808 CXorf66Q5JRM2 361 aaPredicted RBP8.92□□□□□ -0.98
CLIP1-202ENST00000358808 RIMKLAQ8IXN7 391 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 ASB10Q8WXI3 467 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 SPNS1Q9H2V7 528 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 TMEM30AQ9NV96 361 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 BEX4Q9NWD9 120 aaPredicted RBP8.92□□□□□ -0.98
CLIP1-202ENST00000358808 RP1P56715 2156 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 KBTBD11O94819 623 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 IGHV4-34P06331 123 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 CCL8P80075 99 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 C2orf83Q53S99 150 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 SHISA5Q8N114 240 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 OR4C13Q8NGP0 309 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 ZG16BQ96DA0 208 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 TMEM204Q9BSN7 226 aa8.92□□□□□ -0.98
CLIP1-202ENST00000358808 DNAJB12Q9NXW2 375 aaKnown RBP8.92□□□□□ -0.98
CLIP1-202ENST00000358808 KNTC1P50748 2209 aa8.91□□□□□ -0.98
CLIP1-202ENST00000358808 IGHV3OR16-10A0A075B7F0 116 aa8.91□□□□□ -0.98
CLIP1-202ENST00000358808 A0A1B0GTL3 188 aa8.91□□□□□ -0.98
CLIP1-202ENST00000358808 IGKV3-20P01619 116 aa8.91□□□□□ -0.98
CLIP1-202ENST00000358808 TSPOP30536 169 aa8.91□□□□□ -0.98
CLIP1-202ENST00000358808 CX3CL1P78423 397 aa8.91□□□□□ -0.98
CLIP1-202ENST00000358808 FAM219BQ5XKK7 198 aa8.91□□□□□ -0.98
CLIP1-202ENST00000358808 BEND2Q8NDZ0 799 aa8.91□□□□□ -0.98
CLIP1-202ENST00000358808 PRR13Q9NZ81 148 aa8.91□□□□□ -0.98
CLIP1-202ENST00000358808 TRAV39A0A0B4J263 110 aa8.91□□□□□ -0.98
CLIP1-202ENST00000358808 K7N7A8 449 aa8.91□□□□□ -0.98
CLIP1-202ENST00000358808 DHRS2Q13268 280 aa8.91□□□□□ -0.98
CLIP1-202ENST00000358808 MPV17LQ2QL34 196 aa8.91□□□□□ -0.98
CLIP1-202ENST00000358808 TTC32Q5I0X7 151 aa8.91□□□□□ -0.98
CLIP1-202ENST00000358808 ZNF880Q6PDB4 577 aa8.91□□□□□ -0.98
CLIP1-202ENST00000358808 GPR82Q96P67 336 aa8.91□□□□□ -0.98
CLIP1-202ENST00000358808 HIST1H4GQ99525 98 aa8.91□□□□□ -0.98
CLIP1-202ENST00000358808 ALKBH7Q9BT30 221 aaPredicted RBP8.91□□□□□ -0.98
CLIP1-202ENST00000358808 FUT9Q9Y231 359 aa8.91□□□□□ -0.98
CLIP1-202ENST00000358808 DLEC1Q9Y238 1755 aa8.91□□□□□ -0.98
CLIP1-202ENST00000358808 CKS2P33552 79 aa8.91□□□□□ -0.98
CLIP1-202ENST00000358808 P2RY1P47900 373 aa8.91□□□□□ -0.98
CLIP1-202ENST00000358808 SELENOPP49908 381 aa8.91□□□□□ -0.98
CLIP1-202ENST00000358808 CTF1Q16619 201 aa8.91□□□□□ -0.98
CLIP1-202ENST00000358808 WDFY1Q8IWB7 410 aa8.91□□□□□ -0.98
CLIP1-202ENST00000358808 CCL28Q9NRJ3 127 aa8.91□□□□□ -0.98
CLIP1-202ENST00000358808 CXorf51AA0A1B0GTR3 108 aa8.91□□□□□ -0.98
CLIP1-202ENST00000358808 CTAG2O75638 210 aa8.91□□□□□ -0.98
CLIP1-202ENST00000358808 INO80CQ6PI98 192 aaPredicted RBP8.91□□□□□ -0.98
CLIP1-202ENST00000358808 OR2Y1Q8NGV0 311 aa8.91□□□□□ -0.98
CLIP1-202ENST00000358808 RAB24Q969Q5 203 aa8.91□□□□□ -0.98
CLIP1-202ENST00000358808 CCL13Q99616 98 aa8.91□□□□□ -0.98
CLIP1-202ENST00000358808 CLDN14O95500 239 aa8.9□□□□□ -0.98
CLIP1-202ENST00000358808 GPX1P07203 203 aa8.9□□□□□ -0.98
CLIP1-202ENST00000358808 PGA4P0DJD7 388 aa8.9□□□□□ -0.98
CLIP1-202ENST00000358808 PGA5P0DJD9 388 aa8.9□□□□□ -0.98
CLIP1-202ENST00000358808 CCL4P13236 92 aa8.9□□□□□ -0.98
CLIP1-202ENST00000358808 ZP3P21754 424 aa8.9□□□□□ -0.98
CLIP1-202ENST00000358808 RPL27AP46776 148 aaKnown RBP8.9□□□□□ -0.98
CLIP1-202ENST00000358808 SLC35E3Q7Z769 313 aa8.9□□□□□ -0.98
CLIP1-202ENST00000358808 GVQW1Q8N7I0 195 aa8.9□□□□□ -0.98
CLIP1-202ENST00000358808 OR1K1Q8NGR3 316 aa8.9□□□□□ -0.98
CLIP1-202ENST00000358808 OR6X1Q8NH79 312 aa8.9□□□□□ -0.98
CLIP1-202ENST00000358808 SCMH1Q96GD3 660 aa8.9□□□□□ -0.98
CLIP1-202ENST00000358808 GMPPAQ96IJ6 420 aaPredicted RBP8.9□□□□□ -0.98
CLIP1-202ENST00000358808 TRBV5-4A0A0C4DH59 114 aa8.9□□□□□ -0.98
CLIP1-202ENST00000358808 NKX2-2O95096 273 aa8.9□□□□□ -0.98
CLIP1-202ENST00000358808 LILRA6Q6PI73 481 aa8.9□□□□□ -0.98
CLIP1-202ENST00000358808 SCNM1Q9BWG6 230 aa8.9□□□□□ -0.98
CLIP1-202ENST00000358808 SF3B5Q9BWJ5 86 aaKnown RBP8.9□□□□□ -0.98
CLIP1-202ENST00000358808 OR2H1Q9GZK4 316 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms