RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 TRAV24A0A0B4J272 114 aa15.06■□□□□ 0
RTN4-204ENST00000357732 ZFP92A6NM28 416 aa15.06■□□□□ 0
RTN4-204ENST00000357732 NCKAP5O14513 1909 aa15.06■□□□□ 0
RTN4-204ENST00000357732 TRGC1P0CF51 173 aa15.06■□□□□ 0
RTN4-204ENST00000357732 FAM58AQ8N1B3 248 aa15.06■□□□□ 0
RTN4-204ENST00000357732 OR51H1Q8NH63 302 aa15.06■□□□□ 0
RTN4-204ENST00000357732 MAFAQ8NHW3 353 aaPredicted RBP15.06■□□□□ 0
RTN4-204ENST00000357732 ZNF665Q9H7R5 613 aa15.06■□□□□ 0
RTN4-204ENST00000357732 CACNG5Q9UF02 275 aa15.06■□□□□ 0
RTN4-204ENST00000357732 HSPB6O14558 160 aa15.05■□□□□ 0
RTN4-204ENST00000357732 PHOX2AO14813 284 aa15.05■□□□□ 0
RTN4-204ENST00000357732 SYNGR1O43759 233 aa15.05■□□□□ 0
RTN4-204ENST00000357732 NXPH3O95157 252 aa15.05■□□□□ 0
RTN4-204ENST00000357732 IFNA10P01566 189 aa15.05■□□□□ 0
RTN4-204ENST00000357732 SERPINA7P05543 415 aa15.05■□□□□ 0
RTN4-204ENST00000357732 SOD3P08294 240 aa15.05■□□□□ 0
RTN4-204ENST00000357732 C20orf204Q6ZNR8 217 aa15.05■□□□□ 0
RTN4-204ENST00000357732 CENPVQ7Z7K6 275 aaPredicted RBP15.05■□□□□ 0
RTN4-204ENST00000357732 RSG1Q9BU20 258 aa15.05■□□□□ 0
RTN4-204ENST00000357732 WDR61Q9GZS3 305 aaKnown RBP15.05■□□□□ 0
RTN4-204ENST00000357732 PRDM13Q9H4Q3 707 aa15.05■□□□□ 0
RTN4-204ENST00000357732 PRDM6Q9NQX0 595 aa15.05■□□□□ 0
RTN4-204ENST00000357732 B4E171 279 aa15.05■□□□□ -0
RTN4-204ENST00000357732 H3BP45 60 aa15.05■□□□□ -0
RTN4-204ENST00000357732 CCNOP22674 350 aa15.05■□□□□ -0
RTN4-204ENST00000357732 TSPAN7P41732 249 aa15.05■□□□□ -0
RTN4-204ENST00000357732 ZNF726P1Q15940 193 aa15.05■□□□□ -0
RTN4-204ENST00000357732 LILRB2Q8N423 598 aa15.05■□□□□ -0
RTN4-204ENST00000357732 ABHD5Q8WTS1 349 aa15.05■□□□□ -0
RTN4-204ENST00000357732 FRZBQ92765 325 aa15.05■□□□□ -0
RTN4-204ENST00000357732 POM121L2Q96KW2 1035 aa15.05■□□□□ -0
RTN4-204ENST00000357732 ZNF552Q9H707 407 aaPredicted RBP15.05■□□□□ -0
RTN4-204ENST00000357732 CDH20Q9HBT6 801 aa15.05■□□□□ -0
RTN4-204ENST00000357732 DEPPQ9NTK1 212 aa15.05■□□□□ -0
RTN4-204ENST00000357732 DLL3Q9NYJ7 618 aa15.05■□□□□ -0
RTN4-204ENST00000357732 NAT8Q9UHE5 227 aa15.05■□□□□ -0
RTN4-204ENST00000357732 TRBV23-1A0A0A0MS06 115 aa15.04■□□□□ -0
RTN4-204ENST00000357732 RNF212BA8MTL3 300 aa15.04■□□□□ -0
RTN4-204ENST00000357732 PLP2Q04941 152 aa15.04■□□□□ -0
RTN4-204ENST00000357732 Q0VFX4 171 aa15.04■□□□□ -0
RTN4-204ENST00000357732 C5orf24Q7Z6I8 188 aa15.04■□□□□ -0
RTN4-204ENST00000357732 GPR61Q9BZJ8 451 aa15.04■□□□□ -0
RTN4-204ENST00000357732 FREM2Q5SZK8 3169 aa15.04■□□□□ -0
RTN4-204ENST00000357732 CNTRLQ7Z7A1 2325 aa15.04■□□□□ -0
RTN4-204ENST00000357732 IGKV1-39P01597 117 aa15.04■□□□□ -0
RTN4-204ENST00000357732 IGKV1D-39P04432 117 aa15.04■□□□□ -0
RTN4-204ENST00000357732 Q6ZRM9 215 aa15.04■□□□□ -0
RTN4-204ENST00000357732 CYP2G1PQ6ZSU1 146 aa15.04■□□□□ -0
RTN4-204ENST00000357732 TGIF2LYQ8IUE0 185 aa15.04■□□□□ -0
RTN4-204ENST00000357732 Q8IYB0 196 aa15.04■□□□□ -0
RTN4-204ENST00000357732 OR5R1Q8NH85 324 aa15.04■□□□□ -0
RTN4-204ENST00000357732 SRD5A3Q9H8P0 318 aa15.04■□□□□ -0
RTN4-204ENST00000357732 TMEM9BQ9NQ34 198 aa15.04■□□□□ -0
RTN4-204ENST00000357732 CRIM1Q9NZV1 1036 aa15.04■□□□□ -0
RTN4-204ENST00000357732 B4GALT7Q9UBV7 327 aa15.04■□□□□ -0
RTN4-204ENST00000357732 MAP1LC3B2A6NCE7 125 aa15.03■□□□□ -0
RTN4-204ENST00000357732 TMEM250H0YL14 139 aa15.03■□□□□ -0
RTN4-204ENST00000357732 IGLV2-14P01704 120 aa15.03■□□□□ -0
RTN4-204ENST00000357732 HLA-HP01893 362 aa15.03■□□□□ -0
RTN4-204ENST00000357732 OTX2P32243 289 aa15.03■□□□□ -0
RTN4-204ENST00000357732 SSPNQ14714 243 aa15.03■□□□□ -0
RTN4-204ENST00000357732 WDR25Q64LD2 544 aaPredicted RBP15.03■□□□□ -0
RTN4-204ENST00000357732 LCN15Q6UWW0 184 aa15.03■□□□□ -0
RTN4-204ENST00000357732 ZNF600Q6ZNG1 722 aa15.03■□□□□ -0
RTN4-204ENST00000357732 PYGO2Q9BRQ0 406 aa15.03■□□□□ -0
RTN4-204ENST00000357732 MAP1LC3BQ9GZQ8 125 aa15.03■□□□□ -0
RTN4-204ENST00000357732 J3QT63 122 aa15.03■□□□□ -0
RTN4-204ENST00000357732 SYNGR4O95473 234 aa15.03■□□□□ -0
RTN4-204ENST00000357732 IGKV1-5P01602 117 aa15.03■□□□□ -0
RTN4-204ENST00000357732 IGHV3-9P01782 118 aa15.03■□□□□ -0
RTN4-204ENST00000357732 METTL15P1P0C7V9 234 aa15.03■□□□□ -0
RTN4-204ENST00000357732 PKIAP61925 76 aa15.03■□□□□ -0
RTN4-204ENST00000357732 ATP6V1FQ16864 119 aa15.03■□□□□ -0
RTN4-204ENST00000357732 OR10A7Q8NGE5 316 aa15.03■□□□□ -0
RTN4-204ENST00000357732 FAM173AQ9BQD7 235 aa15.03■□□□□ -0
RTN4-204ENST00000357732 PRRG4Q9BZD6 226 aa15.03■□□□□ -0
RTN4-204ENST00000357732 SLC33A1O00400 549 aaPredicted RBP15.02■□□□□ -0
RTN4-204ENST00000357732 HS3ST1O14792 307 aa15.02■□□□□ -0
RTN4-204ENST00000357732 MBP02144 154 aa15.02■□□□□ -0
RTN4-204ENST00000357732 LHX2P50458 406 aa15.02■□□□□ -0
RTN4-204ENST00000357732 TESK1Q15569 626 aa15.02■□□□□ -0
RTN4-204ENST00000357732 SLC23A3Q6PIS1 610 aa15.02■□□□□ -0
RTN4-204ENST00000357732 RNASEH2CQ8TDP1 164 aaKnown RBP15.02■□□□□ -0
RTN4-204ENST00000357732 RDH5Q92781 318 aa15.02■□□□□ -0
RTN4-204ENST00000357732 TAF15Q92804 592 aaKnown RBP eCLIP15.02■□□□□ -0
RTN4-204ENST00000357732 A0A096LPE4 126 aa15.02□□□□□ -0.01
RTN4-204ENST00000357732 A0A1W2PPZ6 126 aa15.02□□□□□ -0.01
RTN4-204ENST00000357732 J3QW42 95 aa15.02□□□□□ -0.01
RTN4-204ENST00000357732 ZNHIT1O43257 154 aa15.02□□□□□ -0.01
RTN4-204ENST00000357732 C9orf152Q5JTZ5 239 aa15.02□□□□□ -0.01
RTN4-204ENST00000357732 OR51I2Q9H344 312 aa15.02□□□□□ -0.01
RTN4-204ENST00000357732 CEBPZOSA8MTT3 80 aa15.01□□□□□ -0.01
RTN4-204ENST00000357732 TSTD3H0UI37 97 aa15.01□□□□□ -0.01
RTN4-204ENST00000357732 GPX4P36969 197 aaPredicted RBP15.01□□□□□ -0.01
RTN4-204ENST00000357732 MEF2BQ02080 365 aaPredicted RBP15.01□□□□□ -0.01
RTN4-204ENST00000357732 ARL16Q0P5N6 197 aa15.01□□□□□ -0.01
RTN4-204ENST00000357732 NCR3LG1Q68D85 454 aa15.01□□□□□ -0.01
RTN4-204ENST00000357732 Q6P435 159 aa15.01□□□□□ -0.01
RTN4-204ENST00000357732 TMEM14EPQ6UXP3 125 aa15.01□□□□□ -0.01
RTN4-204ENST00000357732 HAPLN4Q86UW8 402 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms