RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 M0QYG6 137 aa3.28□□□□□ -1.88
LIG4-201ENST00000356922 ZNF728P0DKX0 622 aa3.28□□□□□ -1.88
LIG4-201ENST00000356922 IGHV1-8P0DP01 117 aa3.28□□□□□ -1.88
LIG4-201ENST00000356922 CD99P14209 185 aa3.28□□□□□ -1.88
LIG4-201ENST00000356922 HNF1AP20823 631 aa3.28□□□□□ -1.88
LIG4-201ENST00000356922 RCVRNP35243 200 aa3.28□□□□□ -1.88
LIG4-201ENST00000356922 PPP1CCP36873 323 aaKnown RBP3.28□□□□□ -1.88
LIG4-201ENST00000356922 OR3A3P47888 321 aa3.28□□□□□ -1.88
LIG4-201ENST00000356922 RAB13P51153 203 aa3.28□□□□□ -1.88
LIG4-201ENST00000356922 DVL1P1P54792 670 aaPredicted RBP3.28□□□□□ -1.88
LIG4-201ENST00000356922 TSPAN5P62079 268 aa3.28□□□□□ -1.88
LIG4-201ENST00000356922 PYDC2Q56P42 97 aa3.28□□□□□ -1.88
LIG4-201ENST00000356922 LINC00596Q86U02 117 aa3.28□□□□□ -1.88
LIG4-201ENST00000356922 TRIM63Q969Q1 353 aa3.28□□□□□ -1.88
LIG4-201ENST00000356922 OCSTAMPQ9BR26 566 aa3.28□□□□□ -1.88
LIG4-201ENST00000356922 AGMATQ9BSE5 352 aa3.28□□□□□ -1.88
LIG4-201ENST00000356922 TINAGL1Q9GZM7 467 aaPredicted RBP3.28□□□□□ -1.88
LIG4-201ENST00000356922 ZNF286AQ9HBT8 521 aa3.28□□□□□ -1.88
LIG4-201ENST00000356922 CALYQ9NYX4 217 aa3.28□□□□□ -1.88
LIG4-201ENST00000356922 KCNS2Q9ULS6 477 aa3.28□□□□□ -1.88
LIG4-201ENST00000356922 LINC00312Q9Y6C7 94 aa3.28□□□□□ -1.88
LIG4-201ENST00000356922 A3GALT2U3KPV4 340 aa3.28□□□□□ -1.88
LIG4-201ENST00000356922 IGKV1D-13A0A0B4J2D9 117 aa3.28□□□□□ -1.89
LIG4-201ENST00000356922 hADV38S2A0JD32 116 aa3.28□□□□□ -1.89
LIG4-201ENST00000356922 TMEM30CPA0ZSE6 113 aa3.28□□□□□ -1.89
LIG4-201ENST00000356922 SERPINE3A8MV23 424 aa3.28□□□□□ -1.89
LIG4-201ENST00000356922 INAFM1C9JVW0 142 aa3.28□□□□□ -1.89
LIG4-201ENST00000356922 TOR1AO14656 332 aa3.28□□□□□ -1.89
LIG4-201ENST00000356922 BET1O15155 118 aa3.28□□□□□ -1.89
LIG4-201ENST00000356922 IGLV2-14P01704 120 aa3.28□□□□□ -1.89
LIG4-201ENST00000356922 PMP2P02689 132 aa3.28□□□□□ -1.89
LIG4-201ENST00000356922 CD3DP04234 171 aa3.28□□□□□ -1.89
LIG4-201ENST00000356922 IFNA6P05013 189 aa3.28□□□□□ -1.89
LIG4-201ENST00000356922 IGKV1-13P0DP09 117 aa3.28□□□□□ -1.89
LIG4-201ENST00000356922 NFYAP23511 347 aaPredicted RBP3.28□□□□□ -1.89
LIG4-201ENST00000356922 CD24P25063 80 aa3.28□□□□□ -1.89
LIG4-201ENST00000356922 PRSS3P35030 304 aa3.28□□□□□ -1.89
LIG4-201ENST00000356922 CT45A1Q5HYN5 189 aa3.28□□□□□ -1.89
LIG4-201ENST00000356922 CYB5R2Q6BCY4 276 aa3.28□□□□□ -1.89
LIG4-201ENST00000356922 GLCCI1Q86VQ1 547 aa3.28□□□□□ -1.89
LIG4-201ENST00000356922 CT45A3Q8NHU0 189 aa3.28□□□□□ -1.89
LIG4-201ENST00000356922 CAPSLQ8WWF8 208 aa3.28□□□□□ -1.89
LIG4-201ENST00000356922 LHX4Q969G2 390 aa3.28□□□□□ -1.89
LIG4-201ENST00000356922 CMTM3Q96MX0 182 aa3.28□□□□□ -1.89
LIG4-201ENST00000356922 GINS4Q9BRT9 223 aa3.28□□□□□ -1.89
LIG4-201ENST00000356922 BEX2Q9BXY8 128 aa3.28□□□□□ -1.89
LIG4-201ENST00000356922 LINC00574Q9H8X3 128 aa3.28□□□□□ -1.89
LIG4-201ENST00000356922 C12orf4Q9NQ89 552 aa3.28□□□□□ -1.89
LIG4-201ENST00000356922 RNF150Q9ULK6 438 aa3.28□□□□□ -1.89
LIG4-201ENST00000356922 PSG11Q9UQ72 335 aa3.28□□□□□ -1.89
LIG4-201ENST00000356922 RBMX2Q9Y388 322 aaKnown RBP3.28□□□□□ -1.89
LIG4-201ENST00000356922 ZNF736B4DX44 427 aaPredicted RBP3.27□□□□□ -1.89
LIG4-201ENST00000356922 PLA2G10O15496 165 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 SPINT2O43291 252 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 LIPFP07098 398 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 GSTP1P09211 210 aaKnown RBP3.27□□□□□ -1.89
LIG4-201ENST00000356922 HOXB4P17483 251 aaPredicted RBP3.27□□□□□ -1.89
LIG4-201ENST00000356922 COX7A1P24310 79 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 GZMKP49863 264 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 NPY4RP50391 375 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 ARL6IP1Q15041 203 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 HMGN3Q15651 99 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 ZNF660Q6AZW8 331 aaPredicted RBP3.27□□□□□ -1.89
LIG4-201ENST00000356922 HEPN1Q6WQI6 88 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 HOGA1Q86XE5 327 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 ODF3L1Q8IXM7 274 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 Q8N402 240 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 BEST4Q8NFU0 473 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 ZNF714Q96N38 554 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 THAP7Q9BT49 309 aaPredicted RBP3.27□□□□□ -1.89
LIG4-201ENST00000356922 SUCNR1Q9BXA5 334 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 RAB9BQ9NP90 201 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 ANAPC10Q9UM13 185 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 TRBV6-6A0A0A6YYG2 114 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 SCGNO76038 276 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 TOX4O94842 621 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 GLAP06280 429 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 ZNF735P0CB33 412 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 HRH1P35367 487 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 CEACAM6P40199 344 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 GNG10P50151 68 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 MEF2CQ06413 473 aaPredicted RBP3.27□□□□□ -1.89
LIG4-201ENST00000356922 CHRFAM7AQ494W8 412 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 MORN2Q502X0 79 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 ARSJQ5FYB0 599 aaPredicted RBP3.27□□□□□ -1.89
LIG4-201ENST00000356922 ZNF57Q68EA5 555 aaPredicted RBP3.27□□□□□ -1.89
LIG4-201ENST00000356922 ZNF439Q8NDP4 499 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 OR56B4Q8NH76 319 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 POM121Q96HA1 1249 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 ABHD14BQ96IU4 210 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 ZNF48Q96MX3 618 aaPredicted RBP3.27□□□□□ -1.89
LIG4-201ENST00000356922 OR2S2Q9NQN1 319 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 TNFRSF19Q9NS68 423 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 MCUBQ9NWR8 336 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 MTFP1Q9UDX5 166 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 SLC23A1Q9UHI7 598 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 ANXA10Q9UJ72 324 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 TNCP24821 2201 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 TRAV40A0A0B4J280 105 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 TRDCB7Z8K6 153 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms