RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 ZNF596Q8TC21 504 aa10.87□□□□□ -0.67
BDNF-202ENST00000356660 ZNF581Q9P0T4 197 aa10.87□□□□□ -0.67
BDNF-202ENST00000356660 R4GN57 208 aa10.87□□□□□ -0.67
BDNF-202ENST00000356660 NPIPB7O75200 414 aa10.87□□□□□ -0.67
BDNF-202ENST00000356660 SUCLG1P53597 346 aaKnown RBP10.87□□□□□ -0.67
BDNF-202ENST00000356660 ERVK-16P61578 105 aa10.87□□□□□ -0.67
BDNF-202ENST00000356660 SNAI3Q3KNW1 292 aa10.87□□□□□ -0.67
BDNF-202ENST00000356660 SMDT1Q9H4I9 107 aa10.87□□□□□ -0.67
BDNF-202ENST00000356660 RNF150Q9ULK6 438 aa10.87□□□□□ -0.67
BDNF-202ENST00000356660 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.87□□□□□ -0.67
BDNF-202ENST00000356660 K7N7A8 449 aa10.87□□□□□ -0.67
BDNF-202ENST00000356660 SIRPB1O00241 398 aa10.87□□□□□ -0.67
BDNF-202ENST00000356660 DEGS1O15121 323 aa10.87□□□□□ -0.67
BDNF-202ENST00000356660 PITX3O75364 302 aa10.87□□□□□ -0.67
BDNF-202ENST00000356660 BCL2P10415 239 aa10.87□□□□□ -0.67
BDNF-202ENST00000356660 ZNF32P17041 273 aa10.87□□□□□ -0.67
BDNF-202ENST00000356660 FAM78BQ5VT40 261 aa10.87□□□□□ -0.67
BDNF-202ENST00000356660 RASL10BQ96S79 203 aa10.87□□□□□ -0.67
BDNF-202ENST00000356660 ARV1Q9H2C2 271 aa10.87□□□□□ -0.67
BDNF-202ENST00000356660 RPRMQ9NS64 109 aa10.87□□□□□ -0.67
BDNF-202ENST00000356660 CLEC18AA5D8T8 446 aa10.87□□□□□ -0.67
BDNF-202ENST00000356660 BMI1P35226 326 aa10.87□□□□□ -0.67
BDNF-202ENST00000356660 ZP4Q12836 540 aa10.87□□□□□ -0.67
BDNF-202ENST00000356660 C5orf24Q7Z6I8 188 aa10.87□□□□□ -0.67
BDNF-202ENST00000356660 CLEC18CQ8NCF0 446 aa10.87□□□□□ -0.67
BDNF-202ENST00000356660 OR1P1Q8NH06 330 aa10.87□□□□□ -0.67
BDNF-202ENST00000356660 EGLN1Q9GZT9 426 aa10.87□□□□□ -0.67
BDNF-202ENST00000356660 FOXD3Q9UJU5 478 aaPredicted RBP10.87□□□□□ -0.67
BDNF-202ENST00000356660 KIR2DS1A0A191URI9 304 aa10.86□□□□□ -0.67
BDNF-202ENST00000356660 AQP7P3A6NL99 342 aa10.86□□□□□ -0.67
BDNF-202ENST00000356660 DVL1O14640 695 aa10.86□□□□□ -0.67
BDNF-202ENST00000356660 CD82P27701 267 aa10.86□□□□□ -0.67
BDNF-202ENST00000356660 KIR2DS4P43632 304 aa10.86□□□□□ -0.67
BDNF-202ENST00000356660 TAS2R30P59541 319 aa10.86□□□□□ -0.67
BDNF-202ENST00000356660 KIR2DS1Q14954 304 aa10.86□□□□□ -0.67
BDNF-202ENST00000356660 RHBDD2Q6NTF9 364 aa10.86□□□□□ -0.67
BDNF-202ENST00000356660 OR2T10Q8NGZ9 312 aa10.86□□□□□ -0.67
BDNF-202ENST00000356660 ADGRG7Q96K78 797 aa10.86□□□□□ -0.67
BDNF-202ENST00000356660 FOXB1Q99853 325 aa10.86□□□□□ -0.67
BDNF-202ENST00000356660 HIST1H2BLQ99880 126 aa10.86□□□□□ -0.67
BDNF-202ENST00000356660 PLEKHA3Q9HB20 300 aa10.86□□□□□ -0.67
BDNF-202ENST00000356660 TRAPPC1Q9Y5R8 145 aa10.86□□□□□ -0.67
BDNF-202ENST00000356660 MTCH2Q9Y6C9 303 aa10.86□□□□□ -0.67
BDNF-202ENST00000356660 B4DEV8 164 aa10.86□□□□□ -0.67
BDNF-202ENST00000356660 IGHEP01854 428 aa10.86□□□□□ -0.67
BDNF-202ENST00000356660 POU2F2P09086 479 aa10.86□□□□□ -0.67
BDNF-202ENST00000356660 GPM6AP51674 278 aa10.86□□□□□ -0.67
BDNF-202ENST00000356660 FAM3BP58499 235 aaPredicted RBP10.86□□□□□ -0.67
BDNF-202ENST00000356660 LSM6P62312 80 aaKnown RBP10.86□□□□□ -0.67
BDNF-202ENST00000356660 RPL19P84098 196 aaKnown RBP10.86□□□□□ -0.67
BDNF-202ENST00000356660 IL24Q13007 206 aa10.86□□□□□ -0.67
BDNF-202ENST00000356660 ICAM4Q14773 271 aa10.86□□□□□ -0.67
BDNF-202ENST00000356660 ANKRD39Q53RE8 183 aa10.86□□□□□ -0.67
BDNF-202ENST00000356660 DBX2Q6ZNG2 339 aa10.86□□□□□ -0.67
BDNF-202ENST00000356660 MAFAQ8NHW3 353 aaPredicted RBP10.86□□□□□ -0.67
BDNF-202ENST00000356660 Q96M66 194 aa10.86□□□□□ -0.67
BDNF-202ENST00000356660 RYDENQ9NUL5 291 aaKnown RBP10.86□□□□□ -0.67
BDNF-202ENST00000356660 FKBP11Q9NYL4 201 aa10.86□□□□□ -0.67
BDNF-202ENST00000356660 MDFIC2A0A1B0GVS7 189 aa10.86□□□□□ -0.67
BDNF-202ENST00000356660 SCTP09683 121 aa10.86□□□□□ -0.67
BDNF-202ENST00000356660 EPHA8P29322 1005 aaPredicted RBP10.86□□□□□ -0.67
BDNF-202ENST00000356660 PAX5Q02548 391 aa10.86□□□□□ -0.67
BDNF-202ENST00000356660 HGFACQ04756 655 aa10.86□□□□□ -0.67
BDNF-202ENST00000356660 RTP5Q14D33 572 aa10.86□□□□□ -0.67
BDNF-202ENST00000356660 CXorf67Q86X51 503 aaPredicted RBP10.86□□□□□ -0.67
BDNF-202ENST00000356660 Q9N2K0 584 aa10.86□□□□□ -0.67
BDNF-202ENST00000356660 PCNX3Q9H6A9 2034 aa10.85□□□□□ -0.67
BDNF-202ENST00000356660 PRR19A6NJB7 356 aa10.85□□□□□ -0.67
BDNF-202ENST00000356660 EREGO14944 169 aa10.85□□□□□ -0.67
BDNF-202ENST00000356660 TRAF3IP2O43734 574 aaPredicted RBP10.85□□□□□ -0.67
BDNF-202ENST00000356660 KRASP01116 189 aa10.85□□□□□ -0.67
BDNF-202ENST00000356660 ENDOGQ14249 297 aaKnown RBP10.85□□□□□ -0.67
BDNF-202ENST00000356660 OR1F12Q8NHA8 337 aa10.85□□□□□ -0.67
BDNF-202ENST00000356660 PRDM13Q9H4Q3 707 aa10.85□□□□□ -0.67
BDNF-202ENST00000356660 VAX2Q9UIW0 290 aa10.85□□□□□ -0.67
BDNF-202ENST00000356660 PAM16Q9Y3D7 125 aa10.85□□□□□ -0.67
BDNF-202ENST00000356660 A6NNC1 897 aa10.85□□□□□ -0.67
BDNF-202ENST00000356660 LYL1P12980 280 aa10.85□□□□□ -0.67
BDNF-202ENST00000356660 DTYMKP23919 212 aa10.85□□□□□ -0.67
BDNF-202ENST00000356660 SUMO3P55854 103 aaPredicted RBP10.85□□□□□ -0.67
BDNF-202ENST00000356660 SPINK14Q6IE38 97 aa10.85□□□□□ -0.67
BDNF-202ENST00000356660 NUDT11Q96G61 164 aa10.85□□□□□ -0.67
BDNF-202ENST00000356660 NEU1Q99519 415 aa10.85□□□□□ -0.67
BDNF-202ENST00000356660 ZDHHC11Q9H8X9 412 aa10.85□□□□□ -0.67
BDNF-202ENST00000356660 MYO18BQ8IUG5 2567 aa10.85□□□□□ -0.67
BDNF-202ENST00000356660 SPINK4O60575 86 aa10.85□□□□□ -0.67
BDNF-202ENST00000356660 CELA2AP08217 269 aa10.85□□□□□ -0.67
BDNF-202ENST00000356660 CFPP27918 469 aa10.85□□□□□ -0.67
BDNF-202ENST00000356660 OR3A1P47881 315 aa10.85□□□□□ -0.67
BDNF-202ENST00000356660 FUT6P51993 359 aa10.85□□□□□ -0.67
BDNF-202ENST00000356660 COL10A1Q03692 680 aa10.85□□□□□ -0.67
BDNF-202ENST00000356660 SPINK9Q5DT21 86 aa10.85□□□□□ -0.67
BDNF-202ENST00000356660 C16orf54Q6UWD8 224 aa10.85□□□□□ -0.67
BDNF-202ENST00000356660 TMEM178AQ8NBL3 297 aa10.85□□□□□ -0.67
BDNF-202ENST00000356660 TMEM222Q9H0R3 208 aa10.85□□□□□ -0.67
BDNF-202ENST00000356660 NAT8Q9UHE5 227 aa10.85□□□□□ -0.67
BDNF-202ENST00000356660 CLDN16Q9Y5I7 305 aa10.85□□□□□ -0.67
BDNF-202ENST00000356660 TRAV34A0A0B4J273 112 aa10.84□□□□□ -0.67
BDNF-202ENST00000356660 DLEU1O43261 78 aa10.84□□□□□ -0.67
BDNF-202ENST00000356660 PDLIM3Q53GG5 364 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms