RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 HSPB2A8KAH6 182 aa15.16■□□□□ 0.02
COL27A1-201ENST00000356083 HSPB2Q16082 182 aa15.16■□□□□ 0.02
COL27A1-201ENST00000356083 KCNK17Q96T54 332 aa15.16■□□□□ 0.02
COL27A1-201ENST00000356083 C5P01031 1676 aa15.16■□□□□ 0.02
COL27A1-201ENST00000356083 LAMB1P07942 1786 aa15.16■□□□□ 0.02
COL27A1-201ENST00000356083 COTL1Q14019 142 aa15.16■□□□□ 0.02
COL27A1-201ENST00000356083 MAVSQ7Z434 540 aa15.16■□□□□ 0.02
COL27A1-201ENST00000356083 CLDN34H7C241 214 aa15.16■□□□□ 0.02
COL27A1-201ENST00000356083 GCAP28676 217 aa15.16■□□□□ 0.02
COL27A1-201ENST00000356083 PIGYQ3MUY2 71 aa15.16■□□□□ 0.02
COL27A1-201ENST00000356083 OR5AU1Q8NGC0 362 aa15.16■□□□□ 0.02
COL27A1-201ENST00000356083 PDCD6O75340 191 aa15.16■□□□□ 0.02
COL27A1-201ENST00000356083 UCNP55089 124 aa15.16■□□□□ 0.02
COL27A1-201ENST00000356083 COL10A1Q03692 680 aa15.16■□□□□ 0.02
COL27A1-201ENST00000356083 DNASE2BQ8WZ79 361 aa15.16■□□□□ 0.02
COL27A1-201ENST00000356083 SIGLEC1Q9BZZ2 1709 aa15.16■□□□□ 0.02
COL27A1-201ENST00000356083 SUMO3P55854 103 aaPredicted RBP15.16■□□□□ 0.02
COL27A1-201ENST00000356083 SLC35E3Q7Z769 313 aa15.16■□□□□ 0.02
COL27A1-201ENST00000356083 OR8B12Q8NGG6 310 aa15.16■□□□□ 0.02
COL27A1-201ENST00000356083 CLDN14O95500 239 aa15.15■□□□□ 0.02
COL27A1-201ENST00000356083 RBFOX2O43251 390 aaKnown RBP eCLIP15.15■□□□□ 0.021e-6■■■□□ 17.4
COL27A1-201ENST00000356083 INHBBP09529 407 aa15.15■□□□□ 0.02
COL27A1-201ENST00000356083 ERVFRD-1P60508 538 aa15.15■□□□□ 0.02
COL27A1-201ENST00000356083 PAXXQ9BUH6 204 aa15.15■□□□□ 0.02
COL27A1-201ENST00000356083 A0A087X0M5 115 aa15.15■□□□□ 0.02
COL27A1-201ENST00000356083 hCG_38984A0A1B0GV85 526 aa15.15■□□□□ 0.02
COL27A1-201ENST00000356083 A0A1B0GX30 115 aa15.15■□□□□ 0.02
COL27A1-201ENST00000356083 A0A1W2PS18 150 aa15.15■□□□□ 0.02
COL27A1-201ENST00000356083 TMEM189A5PLL7 270 aa15.15■□□□□ 0.02
COL27A1-201ENST00000356083 AANATQ16613 207 aa15.15■□□□□ 0.02
COL27A1-201ENST00000356083 MBNL2Q5VZF2 373 aaKnown RBP15.15■□□□□ 0.02
COL27A1-201ENST00000356083 TPRX1Q8N7U7 411 aa15.15■□□□□ 0.02
COL27A1-201ENST00000356083 FREM1Q5H8C1 2179 aa15.15■□□□□ 0.02
COL27A1-201ENST00000356083 PNLIPP16233 465 aa15.15■□□□□ 0.02
COL27A1-201ENST00000356083 OTX1P32242 354 aaPredicted RBP15.15■□□□□ 0.02
COL27A1-201ENST00000356083 STARD6P59095 220 aa15.15■□□□□ 0.02
COL27A1-201ENST00000356083 SNRPEP62304 92 aaKnown RBP15.15■□□□□ 0.02
COL27A1-201ENST00000356083 ZNF324BQ6AW86 544 aaPredicted RBP15.15■□□□□ 0.02
COL27A1-201ENST00000356083 FRRS1LQ9P0K9 344 aa15.15■□□□□ 0.02
COL27A1-201ENST00000356083 IGHV3-48P01763 117 aa15.15■□□□□ 0.02
COL27A1-201ENST00000356083 MALP21145 153 aa15.15■□□□□ 0.02
COL27A1-201ENST00000356083 SELENOPP49908 381 aa15.15■□□□□ 0.02
COL27A1-201ENST00000356083 CLDN20P56880 219 aa15.15■□□□□ 0.02
COL27A1-201ENST00000356083 BEND2Q8NDZ0 799 aa15.15■□□□□ 0.02
COL27A1-201ENST00000356083 PTP4A1Q93096 173 aa15.15■□□□□ 0.02
COL27A1-201ENST00000356083 SF3B6Q9Y3B4 125 aaKnown RBP15.15■□□□□ 0.02
COL27A1-201ENST00000356083 IGHV3-49A0A0A0MS15 119 aa15.15■□□□□ 0.02
COL27A1-201ENST00000356083 GPX1P07203 203 aa15.15■□□□□ 0.02
COL27A1-201ENST00000356083 CNRIP1Q96F85 164 aaPredicted RBP15.15■□□□□ 0.02
COL27A1-201ENST00000356083 CDX2Q99626 313 aaPredicted RBP15.15■□□□□ 0.02
COL27A1-201ENST00000356083 EPHA8P29322 1005 aaPredicted RBP15.14■□□□□ 0.01
COL27A1-201ENST00000356083 METTL1Q9UBP6 276 aaKnown RBP15.14■□□□□ 0.01
COL27A1-201ENST00000356083 MBD1Q9UIS9 605 aaPredicted RBP15.14■□□□□ 0.01
COL27A1-201ENST00000356083 ZFP30Q9Y2G7 519 aa15.14■□□□□ 0.01
COL27A1-201ENST00000356083 RBFOX3A6NFN3 312 aa15.14■□□□□ 0.01
COL27A1-201ENST00000356083 FAM216AQ8WUB2 273 aa15.14■□□□□ 0.01
COL27A1-201ENST00000356083 PMELP40967 661 aa15.14■□□□□ 0.01
COL27A1-201ENST00000356083 RGP1Q92546 391 aaPredicted RBP15.14■□□□□ 0.01
COL27A1-201ENST00000356083 MAP6Q96JE9 813 aa15.14■□□□□ 0.01
COL27A1-201ENST00000356083 REPIN1Q9BWE0 567 aaKnown RBP15.14■□□□□ 0.01
COL27A1-201ENST00000356083 TMEM33P57088 247 aa15.14■□□□□ 0.01
COL27A1-201ENST00000356083 DHRS2Q13268 280 aa15.14■□□□□ 0.01
COL27A1-201ENST00000356083 PGLYRP4Q96LB8 373 aa15.14■□□□□ 0.01
COL27A1-201ENST00000356083 NCMAPQ5T1S8 102 aa15.14■□□□□ 0.01
COL27A1-201ENST00000356083 JMJD6Q6NYC1 403 aaPredicted RBP15.14■□□□□ 0.01
COL27A1-201ENST00000356083 LILRA5A6NI73 299 aa15.14■□□□□ 0.01
COL27A1-201ENST00000356083 ACAA1P09110 424 aaPredicted RBP15.14■□□□□ 0.01
COL27A1-201ENST00000356083 TDGF1P13385 188 aa15.14■□□□□ 0.01
COL27A1-201ENST00000356083 BSXQ3C1V8 233 aa15.14■□□□□ 0.01
COL27A1-201ENST00000356083 LHFPL5Q8TAF8 219 aa15.14■□□□□ 0.01
COL27A1-201ENST00000356083 C11orf68Q9H3H3 251 aaKnown RBP15.14■□□□□ 0.01
COL27A1-201ENST00000356083 PATE3B3GLJ2 98 aa15.13■□□□□ 0.01
COL27A1-201ENST00000356083 MRM1Q6IN84 353 aaKnown RBP15.13■□□□□ 0.01
COL27A1-201ENST00000356083 PRSS50Q9UI38 385 aa15.13■□□□□ 0.01
COL27A1-201ENST00000356083 PLPP3O14495 311 aa15.13■□□□□ 0.01
COL27A1-201ENST00000356083 FCGR3AP08637 254 aa15.13■□□□□ 0.01
COL27A1-201ENST00000356083 RAB9AP51151 201 aa15.13■□□□□ 0.01
COL27A1-201ENST00000356083 MDP1Q86V88 176 aa15.13■□□□□ 0.01
COL27A1-201ENST00000356083 MUC20Q8N307 709 aaPredicted RBP15.13■□□□□ 0.01
COL27A1-201ENST00000356083 C7orf71A4D174 169 aa15.13■□□□□ 0.01
COL27A1-201ENST00000356083 GP2P55259 537 aaKnown RBP15.13■□□□□ 0.01
COL27A1-201ENST00000356083 UNQ5815/PRO19632Q6UWF5 114 aa15.13■□□□□ 0.01
COL27A1-201ENST00000356083 SERGEFQ9UGK8 458 aa15.13■□□□□ 0.01
COL27A1-201ENST00000356083 PDE6DO43924 150 aa15.13■□□□□ 0.01
COL27A1-201ENST00000356083 CLEC18BQ6UXF7 455 aa15.13■□□□□ 0.01
COL27A1-201ENST00000356083 ARRDC1Q8N5I2 433 aa15.13■□□□□ 0.01
COL27A1-201ENST00000356083 CCL13Q99616 98 aa15.13■□□□□ 0.01
COL27A1-201ENST00000356083 MRPS16Q9Y3D3 137 aaKnown RBP15.13■□□□□ 0.01
COL27A1-201ENST00000356083 RGPD3A6NKT7 1758 aaPredicted RBP15.13■□□□□ 0.01
COL27A1-201ENST00000356083 CEACAM18A8MTB9 384 aa15.13■□□□□ 0.01
COL27A1-201ENST00000356083 CX3CL1P78423 397 aa15.13■□□□□ 0.01
COL27A1-201ENST00000356083 TMEM101Q96IK0 257 aa15.13■□□□□ 0.01
COL27A1-201ENST00000356083 VGLL1Q99990 258 aa15.13■□□□□ 0.01
COL27A1-201ENST00000356083 SLC25A37Q9NYZ2 338 aa15.13■□□□□ 0.01
COL27A1-201ENST00000356083 IGLV3-10A0A075B6K4 115 aa15.13■□□□□ 0.01
COL27A1-201ENST00000356083 TEX101Q9BY14 249 aa15.13■□□□□ 0.01
COL27A1-201ENST00000356083 ASB1Q9Y576 335 aa15.13■□□□□ 0.01
COL27A1-201ENST00000356083 PPIAL4EA0A075B759 164 aa15.12■□□□□ 0.01
COL27A1-201ENST00000356083 PPIAL4DF5H284 164 aa15.12■□□□□ 0.01
COL27A1-201ENST00000356083 IGHV3-23P01764 117 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms