RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 IZUMO4Q1ZYL8 232 aa15.65■□□□□ 0.1
COL18A1-202ENST00000355480 MARS2Q96GW9 593 aaKnown RBP15.65■□□□□ 0.1
COL18A1-202ENST00000355480 MIXL1Q9H2W2 232 aa15.65■□□□□ 0.1
COL18A1-202ENST00000355480 TSPAN2O60636 221 aa15.65■□□□□ 0.1
COL18A1-202ENST00000355480 HLA-DRB5Q30154 266 aa15.65■□□□□ 0.1
COL18A1-202ENST00000355480 SAP25Q8TEE9 199 aa15.65■□□□□ 0.1
COL18A1-202ENST00000355480 PDE6DO43924 150 aa15.65■□□□□ 0.1
COL18A1-202ENST00000355480 PF4V1P10720 104 aa15.65■□□□□ 0.1
COL18A1-202ENST00000355480 KIR3DL2P43630 455 aa15.65■□□□□ 0.1
COL18A1-202ENST00000355480 STARD6P59095 220 aa15.65■□□□□ 0.1
COL18A1-202ENST00000355480 GUCA2BQ16661 112 aa15.65■□□□□ 0.1
COL18A1-202ENST00000355480 RPL27AP46776 148 aaKnown RBP15.65■□□□□ 0.1
COL18A1-202ENST00000355480 LRP11Q86VZ4 500 aa15.65■□□□□ 0.1
COL18A1-202ENST00000355480 EAF1Q96JC9 268 aaPredicted RBP15.65■□□□□ 0.1
COL18A1-202ENST00000355480 PILRAQ9UKJ1 303 aa15.65■□□□□ 0.1
COL18A1-202ENST00000355480 A0A0U1RQV5 110 aa15.64■□□□□ 0.09
COL18A1-202ENST00000355480 SMPD2O60906 423 aa15.64■□□□□ 0.09
COL18A1-202ENST00000355480 CTSSP25774 331 aa15.64■□□□□ 0.09
COL18A1-202ENST00000355480 KIR2DL2P43627 348 aaPredicted RBP15.64■□□□□ 0.09
COL18A1-202ENST00000355480 AWAT1Q58HT5 328 aa15.64■□□□□ 0.09
COL18A1-202ENST00000355480 FCGR3AP08637 254 aa15.64■□□□□ 0.09
COL18A1-202ENST00000355480 SPANXN1Q5VSR9 72 aa15.64■□□□□ 0.09
COL18A1-202ENST00000355480 SOSTQ9BQB4 213 aa15.64■□□□□ 0.09
COL18A1-202ENST00000355480 HBZP02008 142 aa15.64■□□□□ 0.09
COL18A1-202ENST00000355480 LYRM7Q5U5X0 104 aa15.64■□□□□ 0.09
COL18A1-202ENST00000355480 LRRC75AQ8NAA5 344 aa15.64■□□□□ 0.09
COL18A1-202ENST00000355480 GHITMQ9H3K2 345 aa15.64■□□□□ 0.09
COL18A1-202ENST00000355480 ST6GALNAC2Q9UJ37 374 aa15.64■□□□□ 0.09
COL18A1-202ENST00000355480 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.64■□□□□ 0.09
COL18A1-202ENST00000355480 PPOXP50336 477 aa15.64■□□□□ 0.09
COL18A1-202ENST00000355480 ELOBQ15370 118 aa15.64■□□□□ 0.09
COL18A1-202ENST00000355480 TMEM91Q6ZNR0 172 aa15.64■□□□□ 0.09
COL18A1-202ENST00000355480 OR2D3Q8NGH3 330 aa15.64■□□□□ 0.09
COL18A1-202ENST00000355480 RAB33BQ9H082 229 aa15.64■□□□□ 0.09
COL18A1-202ENST00000355480 TMEM191AQ9H0A3 160 aa15.64■□□□□ 0.09
COL18A1-202ENST00000355480 SPAG17Q6Q759 2223 aa15.63■□□□□ 0.09
COL18A1-202ENST00000355480 HYPMO75409 117 aa15.63■□□□□ 0.09
COL18A1-202ENST00000355480 CXCL3P19876 107 aa15.63■□□□□ 0.09
COL18A1-202ENST00000355480 NANOS3P60323 173 aaKnown RBP15.63■□□□□ 0.09
COL18A1-202ENST00000355480 C11orf91Q3C1V1 193 aa15.63■□□□□ 0.09
COL18A1-202ENST00000355480 COX19Q49B96 90 aa15.63■□□□□ 0.09
COL18A1-202ENST00000355480 TMEM140Q9NV12 185 aa15.63■□□□□ 0.09
COL18A1-202ENST00000355480 LRRC75BQ2VPJ9 315 aa15.63■□□□□ 0.09
COL18A1-202ENST00000355480 LDLRAD3Q86YD5 345 aa15.63■□□□□ 0.09
COL18A1-202ENST00000355480 C8orf82Q6P1X6 216 aaPredicted RBP15.63■□□□□ 0.09
COL18A1-202ENST00000355480 EBLN2Q6P2I7 272 aa15.63■□□□□ 0.09
COL18A1-202ENST00000355480 PRNTQ86SH4 94 aa15.63■□□□□ 0.09
COL18A1-202ENST00000355480 WNT2BQ93097 391 aa15.63■□□□□ 0.09
COL18A1-202ENST00000355480 LTBP4Q8N2S1 1624 aa15.63■□□□□ 0.09
COL18A1-202ENST00000355480 GCSAMQ8N6F7 178 aa15.63■□□□□ 0.09
COL18A1-202ENST00000355480 PAXXQ9BUH6 204 aa15.63■□□□□ 0.09
COL18A1-202ENST00000355480 METTL1Q9UBP6 276 aaKnown RBP15.63■□□□□ 0.09
COL18A1-202ENST00000355480 KLK13Q9UKR3 277 aa15.63■□□□□ 0.09
COL18A1-202ENST00000355480 PGA4P0DJD7 388 aa15.62■□□□□ 0.09
COL18A1-202ENST00000355480 MPV17P39210 176 aa15.62■□□□□ 0.09
COL18A1-202ENST00000355480 DLK1P80370 383 aa15.62■□□□□ 0.09
COL18A1-202ENST00000355480 GBGT1Q8N5D6 347 aa15.62■□□□□ 0.09
COL18A1-202ENST00000355480 ABHD14BQ96IU4 210 aa15.62■□□□□ 0.09
COL18A1-202ENST00000355480 MAP1LC3CQ9BXW4 147 aa15.62■□□□□ 0.09
COL18A1-202ENST00000355480 FGF12P61328 243 aa15.62■□□□□ 0.09
COL18A1-202ENST00000355480 MRGPRGQ86SM5 289 aa15.62■□□□□ 0.09
COL18A1-202ENST00000355480 EPOPA6NHQ4 379 aa15.62■□□□□ 0.09
COL18A1-202ENST00000355480 PGA5P0DJD9 388 aa15.62■□□□□ 0.09
COL18A1-202ENST00000355480 ZNF826PQ6ZT77 177 aa15.62■□□□□ 0.09
COL18A1-202ENST00000355480 PIMREGQ9BSJ6 248 aa15.62■□□□□ 0.09
COL18A1-202ENST00000355480 PRDM14Q9GZV8 571 aa15.62■□□□□ 0.09
COL18A1-202ENST00000355480 SCN3AQ9NY46 2000 aa15.62■□□□□ 0.09
COL18A1-202ENST00000355480 OPN4Q9UHM6 478 aa15.62■□□□□ 0.09
COL18A1-202ENST00000355480 CTXND1A0A1B0GTU2 59 aa15.62■□□□□ 0.09
COL18A1-202ENST00000355480 OR2H2O95918 312 aa15.62■□□□□ 0.09
COL18A1-202ENST00000355480 ZNF880Q6PDB4 577 aa15.62■□□□□ 0.09
COL18A1-202ENST00000355480 OR4A5Q8NH83 315 aa15.62■□□□□ 0.09
COL18A1-202ENST00000355480 HS3ST3B1Q9Y662 390 aa15.62■□□□□ 0.09
COL18A1-202ENST00000355480 C5orf52A6NGY3 159 aa15.62■□□□□ 0.09
COL18A1-202ENST00000355480 MC5RP33032 325 aa15.62■□□□□ 0.09
COL18A1-202ENST00000355480 PRSS27Q9BQR3 290 aa15.62■□□□□ 0.09
COL18A1-202ENST00000355480 ZDHHC8Q9ULC8 765 aa15.62■□□□□ 0.09
COL18A1-202ENST00000355480 MCM3APO60318 1980 aa15.61■□□□□ 0.09
COL18A1-202ENST00000355480 DHRS7CA6NNS2 312 aa15.61■□□□□ 0.09
COL18A1-202ENST00000355480 DEDDO75618 318 aa15.61■□□□□ 0.09
COL18A1-202ENST00000355480 CALHM1Q8IU99 346 aa15.61■□□□□ 0.09
COL18A1-202ENST00000355480 TEX29Q8N6K0 151 aa15.61■□□□□ 0.09
COL18A1-202ENST00000355480 PRO1933Q9H354 126 aa15.61■□□□□ 0.09
COL18A1-202ENST00000355480 ZNF137PP52743 207 aa15.61■□□□□ 0.09
COL18A1-202ENST00000355480 ZNF735P0CB33 412 aa15.61■□□□□ 0.09
COL18A1-202ENST00000355480 RPL29P47914 159 aaKnown RBP15.61■□□□□ 0.09
COL18A1-202ENST00000355480 DLX1P56177 255 aa15.61■□□□□ 0.09
COL18A1-202ENST00000355480 IRF3Q14653 427 aa15.61■□□□□ 0.09
COL18A1-202ENST00000355480 ATP1A1-AS1Q5TC04 95 aa15.61■□□□□ 0.09
COL18A1-202ENST00000355480 CDCP2Q5VXM1 449 aa15.61■□□□□ 0.09
COL18A1-202ENST00000355480 CEACAM18A8MTB9 384 aa15.61■□□□□ 0.09
COL18A1-202ENST00000355480 CORTO00230 105 aa15.61■□□□□ 0.09
COL18A1-202ENST00000355480 GZMMP51124 257 aa15.61■□□□□ 0.09
COL18A1-202ENST00000355480 CEBPEQ15744 281 aa15.61■□□□□ 0.09
COL18A1-202ENST00000355480 IGSF11Q5DX21 431 aa15.61■□□□□ 0.09
COL18A1-202ENST00000355480 RBM38Q9H0Z9 239 aaKnown RBP15.61■□□□□ 0.09
COL18A1-202ENST00000355480 SNRPCP09234 159 aaKnown RBP15.6■□□□□ 0.09
COL18A1-202ENST00000355480 ISOC2Q96AB3 205 aa15.6■□□□□ 0.09
COL18A1-202ENST00000355480 GUCD1Q96NT3 240 aa15.6■□□□□ 0.09
COL18A1-202ENST00000355480 A0A1W2PPC1 479 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms