RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 HOXA4Q00056 320 aaPredicted RBP14.33□□□□□ -0.11
VPS13B-201ENST00000355155 MBD2Q9UBB5 411 aa14.33□□□□□ -0.11
VPS13B-201ENST00000355155 C13orf42A0A1B0GVH6 325 aa14.33□□□□□ -0.12
VPS13B-201ENST00000355155 TMEM178BH3BS89 294 aa14.33□□□□□ -0.12
VPS13B-201ENST00000355155 BCL2L11O43521 198 aa14.33□□□□□ -0.12
VPS13B-201ENST00000355155 YPEL1O60688 119 aa14.33□□□□□ -0.12
VPS13B-201ENST00000355155 CD80P33681 288 aa14.33□□□□□ -0.12
VPS13B-201ENST00000355155 PPOXP50336 477 aa14.33□□□□□ -0.12
VPS13B-201ENST00000355155 CDSNQ15517 529 aa14.33□□□□□ -0.12
VPS13B-201ENST00000355155 NMSQ5H8A3 153 aa14.33□□□□□ -0.12
VPS13B-201ENST00000355155 C1orf87Q8N0U7 546 aa14.33□□□□□ -0.12
VPS13B-201ENST00000355155 YPEL2Q96QA6 119 aa14.33□□□□□ -0.12
VPS13B-201ENST00000355155 FAM25EA8MYX2 175 aa14.33□□□□□ -0.12
VPS13B-201ENST00000355155 ATP6V1G1O75348 118 aa14.33□□□□□ -0.12
VPS13B-201ENST00000355155 DEDDO75618 318 aa14.33□□□□□ -0.12
VPS13B-201ENST00000355155 RP2O75695 350 aa14.33□□□□□ -0.12
VPS13B-201ENST00000355155 HOXB5P09067 269 aa14.33□□□□□ -0.12
VPS13B-201ENST00000355155 IRF2P14316 349 aa14.33□□□□□ -0.12
VPS13B-201ENST00000355155 CEACAM6P40199 344 aa14.33□□□□□ -0.12
VPS13B-201ENST00000355155 IAH1Q2TAA2 248 aaPredicted RBP14.33□□□□□ -0.12
VPS13B-201ENST00000355155 KAAG1Q9UBP8 84 aa14.33□□□□□ -0.12
VPS13B-201ENST00000355155 CEP295Q9C0D2 2601 aa14.32□□□□□ -0.12
VPS13B-201ENST00000355155 GABRA2P47869 451 aa14.32□□□□□ -0.12
VPS13B-201ENST00000355155 LYZL2Q7Z4W2 148 aa14.32□□□□□ -0.12
VPS13B-201ENST00000355155 OR10A7Q8NGE5 316 aa14.32□□□□□ -0.12
VPS13B-201ENST00000355155 LSM10Q969L4 123 aaKnown RBP14.32□□□□□ -0.12
VPS13B-201ENST00000355155 CACNA1AO00555 2505 aa14.32□□□□□ -0.12
VPS13B-201ENST00000355155 DYSFO75923 2080 aa14.32□□□□□ -0.12
VPS13B-201ENST00000355155 SPINT2O43291 252 aa14.32□□□□□ -0.12
VPS13B-201ENST00000355155 UBA52P62987 128 aaKnown RBP14.32□□□□□ -0.12
VPS13B-201ENST00000355155 SP6Q3SY56 376 aa14.32□□□□□ -0.12
VPS13B-201ENST00000355155 STOML3Q8TAV4 291 aa14.32□□□□□ -0.12
VPS13B-201ENST00000355155 RBPMSQ93062 196 aaKnown RBP14.32□□□□□ -0.12
VPS13B-201ENST00000355155 TRAV38-1A0A0B4J264 116 aa14.31□□□□□ -0.12
VPS13B-201ENST00000355155 RNF212BA8MTL3 300 aa14.31□□□□□ -0.12
VPS13B-201ENST00000355155 HSD17B6O14756 317 aa14.31□□□□□ -0.12
VPS13B-201ENST00000355155 RAB32Q13637 225 aa14.31□□□□□ -0.12
VPS13B-201ENST00000355155 CLLU1Q5K131 121 aa14.31□□□□□ -0.12
VPS13B-201ENST00000355155 SLC35G3Q8N808 338 aa14.31□□□□□ -0.12
VPS13B-201ENST00000355155 OR8H1Q8NGG4 311 aa14.31□□□□□ -0.12
VPS13B-201ENST00000355155 CA5BP1Q8WTZ4 195 aa14.31□□□□□ -0.12
VPS13B-201ENST00000355155 SPIN2AQ99865 258 aa14.31□□□□□ -0.12
VPS13B-201ENST00000355155 SPIN2BQ9BPZ2 258 aa14.31□□□□□ -0.12
VPS13B-201ENST00000355155 DSCAML1Q8TD84 2053 aa14.31□□□□□ -0.12
VPS13B-201ENST00000355155 IGHV3OR15-7A0A075B7D8 119 aa14.31□□□□□ -0.12
VPS13B-201ENST00000355155 TRAV39A0A0B4J263 110 aa14.31□□□□□ -0.12
VPS13B-201ENST00000355155 CYB5R3P00387 301 aaPredicted RBP14.31□□□□□ -0.12
VPS13B-201ENST00000355155 VDAC1P21796 283 aa14.31□□□□□ -0.12
VPS13B-201ENST00000355155 IL2RGP31785 369 aa14.31□□□□□ -0.12
VPS13B-201ENST00000355155 EXOSC2Q13868 293 aaKnown RBP14.31□□□□□ -0.12
VPS13B-201ENST00000355155 OR52M1Q8NGK5 317 aa14.31□□□□□ -0.12
VPS13B-201ENST00000355155 LINC01560Q8TB33 94 aa14.31□□□□□ -0.12
VPS13B-201ENST00000355155 PHYHIPLQ96FC7 376 aa14.31□□□□□ -0.12
VPS13B-201ENST00000355155 ARL6Q9H0F7 186 aa14.31□□□□□ -0.12
VPS13B-201ENST00000355155 UBQLN2Q9UHD9 624 aa14.31□□□□□ -0.12
VPS13B-201ENST00000355155 RPS10-NUDT3A0A1W2PQS6 291 aa14.3□□□□□ -0.12
VPS13B-201ENST00000355155 LINC00862A6NCI5 91 aa14.3□□□□□ -0.12
VPS13B-201ENST00000355155 MMP9P14780 707 aa14.3□□□□□ -0.12
VPS13B-201ENST00000355155 GRNP28799 593 aaKnown RBP14.3□□□□□ -0.12
VPS13B-201ENST00000355155 LOXL3P58215 753 aa14.3□□□□□ -0.12
VPS13B-201ENST00000355155 MRGPRDQ8TDS7 321 aa14.3□□□□□ -0.12
VPS13B-201ENST00000355155 SAP30LQ9HAJ7 183 aa14.3□□□□□ -0.12
VPS13B-201ENST00000355155 PITX3O75364 302 aa14.3□□□□□ -0.12
VPS13B-201ENST00000355155 CFDP00746 253 aaPredicted RBP14.3□□□□□ -0.12
VPS13B-201ENST00000355155 TFF1P04155 84 aa14.3□□□□□ -0.12
VPS13B-201ENST00000355155 MEF2CQ06413 473 aaPredicted RBP14.3□□□□□ -0.12
VPS13B-201ENST00000355155 C17orf58Q2M2W7 97 aa14.3□□□□□ -0.12
VPS13B-201ENST00000355155 ZNF66Q6ZN08 573 aa14.3□□□□□ -0.12
VPS13B-201ENST00000355155 DRAM1Q8N682 238 aa14.3□□□□□ -0.12
VPS13B-201ENST00000355155 AGMATQ9BSE5 352 aa14.3□□□□□ -0.12
VPS13B-201ENST00000355155 LIN7CQ9NUP9 197 aaKnown RBP14.3□□□□□ -0.12
VPS13B-201ENST00000355155 UBE2J1Q9Y385 318 aaPredicted RBP14.3□□□□□ -0.12
VPS13B-201ENST00000355155 TMEM268Q5VZI3 342 aa14.29□□□□□ -0.12
VPS13B-201ENST00000355155 IL1F10Q8WWZ1 152 aa14.29□□□□□ -0.12
VPS13B-201ENST00000355155 TMEM106BQ9NUM4 274 aa14.29□□□□□ -0.12
VPS13B-201ENST00000355155 TAS2R3Q9NYW6 316 aa14.29□□□□□ -0.12
VPS13B-201ENST00000355155 OR5AC2Q9NZP5 309 aa14.29□□□□□ -0.12
VPS13B-201ENST00000355155 POMT1Q9Y6A1 747 aa14.29□□□□□ -0.12
VPS13B-201ENST00000355155 BOD1L1Q8NFC6 3051 aa14.29□□□□□ -0.12
VPS13B-201ENST00000355155 Q3ZCU0 254 aa14.29□□□□□ -0.12
VPS13B-201ENST00000355155 TCF23Q7RTU1 214 aa14.29□□□□□ -0.12
VPS13B-201ENST00000355155 INO80EQ8NBZ0 244 aaPredicted RBP14.29□□□□□ -0.12
VPS13B-201ENST00000355155 OR52L2PQ8NGH6 319 aa14.29□□□□□ -0.12
VPS13B-201ENST00000355155 OR1S1Q8NH92 325 aa14.29□□□□□ -0.12
VPS13B-201ENST00000355155 EDARADDQ8WWZ3 215 aa14.29□□□□□ -0.12
VPS13B-201ENST00000355155 ARL11Q969Q4 196 aa14.29□□□□□ -0.12
VPS13B-201ENST00000355155 RRNAD1Q96FB5 475 aaKnown RBP14.29□□□□□ -0.12
VPS13B-201ENST00000355155 C5orf30Q96GV9 206 aa14.29□□□□□ -0.12
VPS13B-201ENST00000355155 PARP12Q9H0J9 701 aaKnown RBP14.29□□□□□ -0.12
VPS13B-201ENST00000355155 PLEKHA2Q9HB19 425 aa14.29□□□□□ -0.12
VPS13B-201ENST00000355155 LPAR3Q9UBY5 353 aa14.29□□□□□ -0.12
VPS13B-201ENST00000355155 ZNF729A6NN14 1252 aaPredicted RBP14.28□□□□□ -0.12
VPS13B-201ENST00000355155 NDUFA2O43678 99 aa14.28□□□□□ -0.12
VPS13B-201ENST00000355155 NEUROG1Q92886 237 aa14.28□□□□□ -0.12
VPS13B-201ENST00000355155 MED9Q9NWA0 146 aa14.28□□□□□ -0.12
VPS13B-201ENST00000355155 NKX6-3A6NJ46 265 aa14.28□□□□□ -0.12
VPS13B-201ENST00000355155 K7EPK0 472 aa14.28□□□□□ -0.12
VPS13B-201ENST00000355155 HSPA12AO43301 675 aa14.28□□□□□ -0.12
VPS13B-201ENST00000355155 MBPP02686 304 aaPredicted RBP14.28□□□□□ -0.12
VPS13B-201ENST00000355155 MRPS11P82912 194 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms