RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 ECSCRQ19T08 205 aa7.1□□□□□ -1.27
SCN8A-201ENST00000354534 GAGE2EQ4V326 116 aa7.1□□□□□ -1.27
SCN8A-201ENST00000354534 GVQW1Q8N7I0 195 aa7.1□□□□□ -1.27
SCN8A-201ENST00000354534 NOXO1Q8NFA2 376 aa7.1□□□□□ -1.27
SCN8A-201ENST00000354534 NT5CQ8TCD5 201 aa7.1□□□□□ -1.27
SCN8A-201ENST00000354534 APOBEC3DQ96AK3 386 aaPredicted RBP7.1□□□□□ -1.27
SCN8A-201ENST00000354534 FOXQ1Q9C009 403 aa7.1□□□□□ -1.27
SCN8A-201ENST00000354534 GAGE2DQ9UEU5 116 aa7.1□□□□□ -1.27
SCN8A-201ENST00000354534 LINC00614P0C842 121 aa7.1□□□□□ -1.27
SCN8A-201ENST00000354534 AGERQ15109 404 aa7.1□□□□□ -1.27
SCN8A-201ENST00000354534 FDCSPQ8NFU4 85 aa7.1□□□□□ -1.27
SCN8A-201ENST00000354534 RSPO3Q9BXY4 272 aaPredicted RBP7.1□□□□□ -1.27
SCN8A-201ENST00000354534 WNT10AQ9GZT5 417 aa7.1□□□□□ -1.27
SCN8A-201ENST00000354534 AKIP1Q9NQ31 210 aa7.1□□□□□ -1.27
SCN8A-201ENST00000354534 C4AP0C0L4 1744 aa7.1□□□□□ -1.27
SCN8A-201ENST00000354534 C4BP0C0L5 1744 aa7.1□□□□□ -1.27
SCN8A-201ENST00000354534 TJP1Q07157 1748 aa7.1□□□□□ -1.27
SCN8A-201ENST00000354534 HMGN4O00479 90 aa7.1□□□□□ -1.27
SCN8A-201ENST00000354534 EIF3GO75821 320 aaKnown RBP eCLIP7.1□□□□□ -1.27
SCN8A-201ENST00000354534 RAC3P60763 192 aa7.1□□□□□ -1.27
SCN8A-201ENST00000354534 OR1F12Q8NHA8 337 aa7.1□□□□□ -1.27
SCN8A-201ENST00000354534 LOXL2Q9Y4K0 774 aa7.1□□□□□ -1.27
SCN8A-201ENST00000354534 FZD5Q13467 585 aa7.1□□□□□ -1.27
SCN8A-201ENST00000354534 RPS19BP1Q86WX3 136 aaKnown RBP7.1□□□□□ -1.27
SCN8A-201ENST00000354534 CADM4Q8NFZ8 388 aa7.1□□□□□ -1.27
SCN8A-201ENST00000354534 GGACTQ9BVM4 153 aa7.1□□□□□ -1.27
SCN8A-201ENST00000354534 ZDHHC8Q9ULC8 765 aa7.1□□□□□ -1.27
SCN8A-201ENST00000354534 KCNMB2Q9Y691 235 aa7.1□□□□□ -1.27
SCN8A-201ENST00000354534 ALPK2Q86TB3 2170 aa7.1□□□□□ -1.27
SCN8A-201ENST00000354534 GP1BAP07359 652 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 MC5RP33032 325 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 RPL32P62910 135 aaKnown RBP7.09□□□□□ -1.27
SCN8A-201ENST00000354534 C6orf15Q6UXA7 325 aaPredicted RBP7.09□□□□□ -1.27
SCN8A-201ENST00000354534 STPG2Q8N412 459 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 MRPL30Q8TCC3 161 aaKnown RBP7.09□□□□□ -1.27
SCN8A-201ENST00000354534 TXNRD2Q9NNW7 524 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 ANOS1P23352 680 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 CLEC1BQ9P126 229 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 SLC25A15Q9Y619 301 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 MALP21145 153 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 CX3CL1P78423 397 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 HTR3DQ70Z44 454 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 FAM89BQ8N5H3 189 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 PGLYRP3Q96LB9 341 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 CYSLTR2Q9NS75 346 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 WDR81Q562E7 1941 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 TMEM106BQ9NUM4 274 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 TRGC1P0CF51 173 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 NUBP1P53384 320 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 IP6K3Q96PC2 410 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 KLF13Q9Y2Y9 288 aaPredicted RBP7.09□□□□□ -1.27
SCN8A-201ENST00000354534 DPRXA6NFQ7 191 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 METTL12A8MUP2 240 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 ID4P47928 161 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 ST6GALNAC6Q969X2 333 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 NPIPB8E9PQR5 432 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 NPIPB9F8W1W9 429 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 TAPBPO15533 448 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 NPIPB7O75200 414 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 NDUFB4O95168 129 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 GPX2P18283 190 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 SPINK2P20155 84 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 SRIP30626 198 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 GAGE2BQ13066 116 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 SLC39A5Q6ZMH5 540 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 TCF24Q7RTU0 167 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 CYB561D1Q8N8Q1 229 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 TRAV38-1A0A0B4J264 116 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 SIGLEC5O15389 551 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 KLF4O43474 513 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 SELENOPP49908 381 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 ZNF415Q09FC8 603 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 KIAA1644Q3SXP7 199 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 FAHD1Q6P587 224 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 ECM29Q5VYK3 1845 aa7.09□□□□□ -1.27
SCN8A-201ENST00000354534 TDGF1P13385 188 aa7.09□□□□□ -1.28
SCN8A-201ENST00000354534 SUMO4Q6EEV6 95 aa7.09□□□□□ -1.28
SCN8A-201ENST00000354534 SH2D5Q6ZV89 423 aa7.09□□□□□ -1.28
SCN8A-201ENST00000354534 LHFPL5Q8TAF8 219 aa7.09□□□□□ -1.28
SCN8A-201ENST00000354534 VSTM2AQ8TAG5 236 aa7.09□□□□□ -1.28
SCN8A-201ENST00000354534 ALKBH3Q96Q83 286 aaPredicted RBP7.09□□□□□ -1.28
SCN8A-201ENST00000354534 C20orf27Q9GZN8 174 aa7.09□□□□□ -1.28
SCN8A-201ENST00000354534 KCNE5Q9UJ90 142 aa7.09□□□□□ -1.28
SCN8A-201ENST00000354534 OR11H12B2RN74 326 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 PLPP1O14494 284 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 CXCL13O43927 109 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 OR2A4O95047 310 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 SURF2Q15527 256 aaPredicted RBP7.08□□□□□ -1.28
SCN8A-201ENST00000354534 PRICKLE4Q2TBC4 344 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 SLCO4C1Q6ZQN7 724 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 OR11H1Q8NG94 326 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 OR11H2Q8NH07 326 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 ST8SIA1Q92185 356 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 OR2A7Q96R45 310 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 MED12Q93074 2177 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 FAM209AQ5JX71 171 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 SLC25A40Q8TBP6 338 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 ST6GAL2Q96JF0 529 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 LINC01553A4QN01 128 aa7.08□□□□□ -1.28
SCN8A-201ENST00000354534 EMDP50402 254 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms