RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 NKX6-3A6NJ46 265 aa9.35□□□□□ -0.91
SVIP-201ENST00000354193 C12orf77C9JDV5 145 aa9.35□□□□□ -0.91
SVIP-201ENST00000354193 ENSAO43768 121 aaKnown RBP9.35□□□□□ -0.91
SVIP-201ENST00000354193 IL13RA2Q14627 380 aa9.35□□□□□ -0.91
SVIP-201ENST00000354193 MUC15Q8N387 334 aa9.35□□□□□ -0.91
SVIP-201ENST00000354193 FGFRL1Q8N441 504 aa9.35□□□□□ -0.91
SVIP-201ENST00000354193 MRPL30Q8TCC3 161 aaKnown RBP9.35□□□□□ -0.91
SVIP-201ENST00000354193 PLEKHF2Q9H8W4 249 aa9.35□□□□□ -0.91
SVIP-201ENST00000354193 LPAR2Q9HBW0 351 aa9.35□□□□□ -0.91
SVIP-201ENST00000354193 OR5AC2Q9NZP5 309 aa9.35□□□□□ -0.91
SVIP-201ENST00000354193 PFDN2Q9UHV9 154 aa9.35□□□□□ -0.91
SVIP-201ENST00000354193 SMCO3A2RU48 225 aa9.35□□□□□ -0.91
SVIP-201ENST00000354193 PRB1P04280 392 aa9.35□□□□□ -0.91
SVIP-201ENST00000354193 CCKARP32238 428 aa9.35□□□□□ -0.91
SVIP-201ENST00000354193 OR8G2PQ6IF36 304 aa9.35□□□□□ -0.91
SVIP-201ENST00000354193 C1orf87Q8N0U7 546 aa9.35□□□□□ -0.91
SVIP-201ENST00000354193 SPAG16Q8N0X2 631 aa9.35□□□□□ -0.91
SVIP-201ENST00000354193 ZNF107Q9UII5 783 aaPredicted RBP9.35□□□□□ -0.91
SVIP-201ENST00000354193 TRGV10A0A0A0MS01 117 aa9.34□□□□□ -0.91
SVIP-201ENST00000354193 FCGR3BO75015 233 aa9.34□□□□□ -0.91
SVIP-201ENST00000354193 IGHV1-46P01743 117 aa9.34□□□□□ -0.91
SVIP-201ENST00000354193 ARHGDIBP52566 201 aa9.34□□□□□ -0.91
SVIP-201ENST00000354193 LAMTOR1Q6IAA8 161 aa9.34□□□□□ -0.91
SVIP-201ENST00000354193 SSC4DQ8WTU2 575 aa9.34□□□□□ -0.91
SVIP-201ENST00000354193 NUP50Q9UKX7 468 aa9.34□□□□□ -0.91
SVIP-201ENST00000354193 ST8SIA3O43173 380 aa9.34□□□□□ -0.91
SVIP-201ENST00000354193 CLDN1O95832 211 aa9.34□□□□□ -0.91
SVIP-201ENST00000354193 GCSAMQ8N6F7 178 aa9.34□□□□□ -0.91
SVIP-201ENST00000354193 CNTNAP3BQ96NU0 1288 aa9.34□□□□□ -0.91
SVIP-201ENST00000354193 ALX4Q9H161 411 aaPredicted RBP9.34□□□□□ -0.91
SVIP-201ENST00000354193 RNF115Q9Y4L5 304 aa9.34□□□□□ -0.91
SVIP-201ENST00000354193 CEBPZOSA8MTT3 80 aa9.34□□□□□ -0.91
SVIP-201ENST00000354193 TDGF1P3P51864 188 aa9.34□□□□□ -0.91
SVIP-201ENST00000354193 TAS2R3Q9NYW6 316 aa9.34□□□□□ -0.91
SVIP-201ENST00000354193 IL36GQ9NZH8 169 aa9.34□□□□□ -0.91
SVIP-201ENST00000354193 ODAMA1E959 279 aa9.33□□□□□ -0.92
SVIP-201ENST00000354193 SPANXN5Q5MJ07 72 aa9.33□□□□□ -0.92
SVIP-201ENST00000354193 SAXO1Q8IYX7 474 aa9.33□□□□□ -0.92
SVIP-201ENST00000354193 BOD1Q96IK1 185 aa9.33□□□□□ -0.92
SVIP-201ENST00000354193 SPIN2AQ99865 258 aa9.33□□□□□ -0.92
SVIP-201ENST00000354193 SPIN2BQ9BPZ2 258 aa9.33□□□□□ -0.92
SVIP-201ENST00000354193 SLC2A8Q9NY64 477 aa9.33□□□□□ -0.92
SVIP-201ENST00000354193 COX7A1P24310 79 aa9.33□□□□□ -0.92
SVIP-201ENST00000354193 RPL31P62899 125 aaKnown RBP9.33□□□□□ -0.92
SVIP-201ENST00000354193 NKX6-1P78426 367 aaPredicted RBP9.33□□□□□ -0.92
SVIP-201ENST00000354193 CATR1Q13166 79 aa9.33□□□□□ -0.92
SVIP-201ENST00000354193 LY6G6FQ5SQ64 297 aa9.33□□□□□ -0.92
SVIP-201ENST00000354193 ZNF767PQ75MW2 155 aa9.33□□□□□ -0.92
SVIP-201ENST00000354193 POC1AQ8NBT0 407 aa9.33□□□□□ -0.92
SVIP-201ENST00000354193 ANGPTL6Q8NI99 470 aa9.33□□□□□ -0.92
SVIP-201ENST00000354193 HRH4Q9H3N8 390 aa9.33□□□□□ -0.92
SVIP-201ENST00000354193 MS4A5Q9H3V2 200 aa9.33□□□□□ -0.92
SVIP-201ENST00000354193 CACNG5Q9UF02 275 aa9.33□□□□□ -0.92
SVIP-201ENST00000354193 CHD3Q12873 2000 aaKnown RBP9.33□□□□□ -0.92
SVIP-201ENST00000354193 RPL12P30050 165 aaKnown RBP9.33□□□□□ -0.92
SVIP-201ENST00000354193 ECI1P42126 302 aa9.33□□□□□ -0.92
SVIP-201ENST00000354193 SUPT4H1P63272 117 aaKnown RBP9.33□□□□□ -0.92
SVIP-201ENST00000354193 NDUFA5Q16718 116 aa9.33□□□□□ -0.92
SVIP-201ENST00000354193 TEX261Q6UWH6 196 aa9.33□□□□□ -0.92
SVIP-201ENST00000354193 MOB3AQ96BX8 217 aa9.33□□□□□ -0.92
SVIP-201ENST00000354193 U3KQ87 197 aa9.33□□□□□ -0.92
SVIP-201ENST00000354193 FAM24AA6NFZ4 105 aa9.33□□□□□ -0.92
SVIP-201ENST00000354193 NDUFB3O43676 98 aa9.33□□□□□ -0.92
SVIP-201ENST00000354193 LPAR6P43657 344 aa9.33□□□□□ -0.92
SVIP-201ENST00000354193 ADIPOQQ15848 244 aa9.33□□□□□ -0.92
SVIP-201ENST00000354193 LIAT1Q6ZQX7 453 aa9.33□□□□□ -0.92
SVIP-201ENST00000354193 ACOT7LQ6ZUV0 252 aa9.33□□□□□ -0.92
SVIP-201ENST00000354193 OR52M1Q8NGK5 317 aa9.33□□□□□ -0.92
SVIP-201ENST00000354193 ELOVL5Q9NYP7 299 aa9.33□□□□□ -0.92
SVIP-201ENST00000354193 PPIAL4EA0A075B759 164 aa9.32□□□□□ -0.92
SVIP-201ENST00000354193 PPIAL4DF5H284 164 aa9.32□□□□□ -0.92
SVIP-201ENST00000354193 J3QW42 95 aa9.32□□□□□ -0.92
SVIP-201ENST00000354193 PPIAL4FP0DN26 164 aa9.32□□□□□ -0.92
SVIP-201ENST00000354193 CDKN1AP38936 164 aa9.32□□□□□ -0.92
SVIP-201ENST00000354193 DLX1P56177 255 aa9.32□□□□□ -0.92
SVIP-201ENST00000354193 CXorf66Q5JRM2 361 aaPredicted RBP9.32□□□□□ -0.92
SVIP-201ENST00000354193 RCL1Q9Y2P8 373 aaKnown RBP9.32□□□□□ -0.92
SVIP-201ENST00000354193 PPIAL4AQ9Y536 164 aa9.32□□□□□ -0.92
SVIP-201ENST00000354193 CFPP27918 469 aa9.32□□□□□ -0.92
SVIP-201ENST00000354193 CA7P43166 264 aa9.32□□□□□ -0.92
SVIP-201ENST00000354193 HERPUD1Q15011 391 aa9.32□□□□□ -0.92
SVIP-201ENST00000354193 COMMD7Q86VX2 200 aa9.32□□□□□ -0.92
SVIP-201ENST00000354193 CD177Q8N6Q3 437 aa9.32□□□□□ -0.92
SVIP-201ENST00000354193 OR4A4PQ8NGN8 299 aa9.32□□□□□ -0.92
SVIP-201ENST00000354193 GLYATL2Q8WU03 294 aa9.32□□□□□ -0.92
SVIP-201ENST00000354193 NUDT16L1Q9BRJ7 211 aaKnown RBP9.32□□□□□ -0.92
SVIP-201ENST00000354193 GCM1Q9NP62 436 aa9.32□□□□□ -0.92
SVIP-201ENST00000354193 RAB18Q9NP72 206 aa9.32□□□□□ -0.92
SVIP-201ENST00000354193 SESN1Q9Y6P5 492 aa9.32□□□□□ -0.92
SVIP-201ENST00000354193 C17orf100A8MU93 164 aa9.32□□□□□ -0.92
SVIP-201ENST00000354193 G6PCP35575 357 aa9.32□□□□□ -0.92
SVIP-201ENST00000354193 FAM90A1Q86YD7 464 aa9.32□□□□□ -0.92
SVIP-201ENST00000354193 VKORC1L1Q8N0U8 176 aa9.32□□□□□ -0.92
SVIP-201ENST00000354193 CLCC1Q96S66 551 aa9.32□□□□□ -0.92
SVIP-201ENST00000354193 OOEPA6NGQ2 149 aa9.32□□□□□ -0.92
SVIP-201ENST00000354193 IGLV1-44P01699 117 aa9.32□□□□□ -0.92
SVIP-201ENST00000354193 LILRB2Q8N423 598 aa9.32□□□□□ -0.92
SVIP-201ENST00000354193 LILRB4Q8NHJ6 448 aa9.32□□□□□ -0.92
SVIP-201ENST00000354193 SLC25A10Q9UBX3 287 aaPredicted RBP9.32□□□□□ -0.92
SVIP-201ENST00000354193 NPTNQ9Y639 398 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms