RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 SLC25A21Q9BQT8 299 aaPredicted RBP16.55■□□□□ 0.24
SIGMAR1-202ENST00000353468 TOLLIPQ9H0E2 274 aa16.55■□□□□ 0.24
SIGMAR1-202ENST00000353468 MMP28Q9H239 520 aa16.55■□□□□ 0.24
SIGMAR1-202ENST00000353468 JPT1Q9UK76 154 aa16.55■□□□□ 0.24
SIGMAR1-202ENST00000353468 ARHGAP32A7KAX9 2087 aa16.54■□□□□ 0.24
SIGMAR1-202ENST00000353468 MMP23AO75900 390 aa16.54■□□□□ 0.24
SIGMAR1-202ENST00000353468 PPYP01298 95 aa16.54■□□□□ 0.24
SIGMAR1-202ENST00000353468 LOXL3P58215 753 aa16.54■□□□□ 0.24
SIGMAR1-202ENST00000353468 GNMTQ14749 295 aa16.54■□□□□ 0.24
SIGMAR1-202ENST00000353468 PRAMEF5Q5TYX0 476 aa16.54■□□□□ 0.24
SIGMAR1-202ENST00000353468 FAM53AQ6NSI3 398 aaPredicted RBP16.54■□□□□ 0.24
SIGMAR1-202ENST00000353468 PLET1Q6UQ28 207 aa16.54■□□□□ 0.24
SIGMAR1-202ENST00000353468 HEPN1Q6WQI6 88 aa16.54■□□□□ 0.24
SIGMAR1-202ENST00000353468 RDH8Q9NYR8 311 aa16.54■□□□□ 0.24
SIGMAR1-202ENST00000353468 NUBP2Q9Y5Y2 271 aa16.54■□□□□ 0.24
SIGMAR1-202ENST00000353468 C17orf98A8MV24 154 aa16.53■□□□□ 0.24
SIGMAR1-202ENST00000353468 FAM157AC9JC47 383 aa16.53■□□□□ 0.24
SIGMAR1-202ENST00000353468 ERVFRD-1P60508 538 aa16.53■□□□□ 0.24
SIGMAR1-202ENST00000353468 HERV-K104P61576 105 aa16.53■□□□□ 0.24
SIGMAR1-202ENST00000353468 TMEM30BQ3MIR4 351 aa16.53■□□□□ 0.24
SIGMAR1-202ENST00000353468 C11orf42Q8N5U0 333 aa16.53■□□□□ 0.24
SIGMAR1-202ENST00000353468 OR10V1Q8NGI7 309 aa16.53■□□□□ 0.24
SIGMAR1-202ENST00000353468 OR52M1Q8NGK5 317 aa16.53■□□□□ 0.24
SIGMAR1-202ENST00000353468 MOB3AQ96BX8 217 aa16.53■□□□□ 0.24
SIGMAR1-202ENST00000353468 GFOD1Q9NXC2 390 aa16.53■□□□□ 0.24
SIGMAR1-202ENST00000353468 GNG12Q9UBI6 72 aa16.53■□□□□ 0.24
SIGMAR1-202ENST00000353468 OR2W1Q9Y3N9 320 aa16.53■□□□□ 0.24
SIGMAR1-202ENST00000353468 NAV2Q8IVL1 2488 aa16.52■□□□□ 0.24
SIGMAR1-202ENST00000353468 A0A096LNT2 108 aa16.52■□□□□ 0.24
SIGMAR1-202ENST00000353468 FAM172BPA6NC97 362 aa16.52■□□□□ 0.24
SIGMAR1-202ENST00000353468 ENSAO43768 121 aaKnown RBP16.52■□□□□ 0.24
SIGMAR1-202ENST00000353468 YPEL1O60688 119 aa16.52■□□□□ 0.24
SIGMAR1-202ENST00000353468 NFYBP25208 207 aa16.52■□□□□ 0.24
SIGMAR1-202ENST00000353468 PPP1CCP36873 323 aaKnown RBP16.52■□□□□ 0.24
SIGMAR1-202ENST00000353468 FXYD4P59646 89 aa16.52■□□□□ 0.24
SIGMAR1-202ENST00000353468 MORN2Q502X0 79 aa16.52■□□□□ 0.24
SIGMAR1-202ENST00000353468 MARCH1Q8TCQ1 289 aa16.52■□□□□ 0.24
SIGMAR1-202ENST00000353468 DMRTB1Q96MA1 342 aa16.52■□□□□ 0.24
SIGMAR1-202ENST00000353468 Q96MF0 132 aa16.52■□□□□ 0.24
SIGMAR1-202ENST00000353468 YPEL2Q96QA6 119 aa16.52■□□□□ 0.24
SIGMAR1-202ENST00000353468 C20orf85Q9H1P6 137 aa16.52■□□□□ 0.24
SIGMAR1-202ENST00000353468 NUDT15Q9NV35 164 aa16.52■□□□□ 0.24
SIGMAR1-202ENST00000353468 POLR3KQ9Y2Y1 108 aaPredicted RBP16.52■□□□□ 0.24
SIGMAR1-202ENST00000353468 TRAV6A0A075B6T7 132 aa16.51■□□□□ 0.23
SIGMAR1-202ENST00000353468 ECI1P42126 302 aa16.51■□□□□ 0.23
SIGMAR1-202ENST00000353468 PAX2Q02962 417 aa16.51■□□□□ 0.23
SIGMAR1-202ENST00000353468 DACT3Q96B18 629 aaPredicted RBP16.51■□□□□ 0.23
SIGMAR1-202ENST00000353468 UPRTQ96BW1 309 aa16.51■□□□□ 0.23
SIGMAR1-202ENST00000353468 FOXC2Q99958 501 aa16.51■□□□□ 0.23
SIGMAR1-202ENST00000353468 REG4Q9BYZ8 158 aa16.51■□□□□ 0.23
SIGMAR1-202ENST00000353468 PARP12Q9H0J9 701 aaKnown RBP16.51■□□□□ 0.23
SIGMAR1-202ENST00000353468 FXYD6Q9H0Q3 95 aa16.51■□□□□ 0.23
SIGMAR1-202ENST00000353468 ONECUT1Q9UBC0 465 aa16.51■□□□□ 0.23
SIGMAR1-202ENST00000353468 FLVCR2Q9UPI3 526 aa16.51■□□□□ 0.23
SIGMAR1-202ENST00000353468 MED13LQ71F56 2210 aa16.51■□□□□ 0.23
SIGMAR1-202ENST00000353468 RGS11O94810 467 aa16.51■□□□□ 0.23
SIGMAR1-202ENST00000353468 ZDHHC22Q8N966 263 aa16.51■□□□□ 0.23
SIGMAR1-202ENST00000353468 TOMM40LQ969M1 308 aa16.51■□□□□ 0.23
SIGMAR1-202ENST00000353468 SCGB3A2Q96PL1 93 aa16.51■□□□□ 0.23
SIGMAR1-202ENST00000353468 MARVELD1Q9BSK0 173 aa16.51■□□□□ 0.23
SIGMAR1-202ENST00000353468 GPR132Q9UNW8 380 aa16.51■□□□□ 0.23
SIGMAR1-202ENST00000353468 VSIG4Q9Y279 399 aa16.51■□□□□ 0.23
SIGMAR1-202ENST00000353468 IGKV1D-13A0A0B4J2D9 117 aa16.5■□□□□ 0.23
SIGMAR1-202ENST00000353468 IGHV2-70DA0A0C4DH43 119 aa16.5■□□□□ 0.23
SIGMAR1-202ENST00000353468 hCG_1809904A0A1W2PP81 198 aa16.5■□□□□ 0.23
SIGMAR1-202ENST00000353468 A0A1W2PPE2 198 aa16.5■□□□□ 0.23
SIGMAR1-202ENST00000353468 A0A1W2PR64 198 aa16.5■□□□□ 0.23
SIGMAR1-202ENST00000353468 A0A1W2PRV1 198 aa16.5■□□□□ 0.23
SIGMAR1-202ENST00000353468 RNF223E7ERA6 249 aa16.5■□□□□ 0.23
SIGMAR1-202ENST00000353468 ARPC1BO15143 372 aaKnown RBP16.5■□□□□ 0.23
SIGMAR1-202ENST00000353468 RBP4P02753 201 aa16.5■□□□□ 0.23
SIGMAR1-202ENST00000353468 H2AFB2P0C5Z0 115 aa16.5■□□□□ 0.23
SIGMAR1-202ENST00000353468 IGHV1-8P0DP01 117 aa16.5■□□□□ 0.23
SIGMAR1-202ENST00000353468 IGKV1-13P0DP09 117 aa16.5■□□□□ 0.23
SIGMAR1-202ENST00000353468 PGAM2P15259 253 aa16.5■□□□□ 0.23
SIGMAR1-202ENST00000353468 LUMP51884 338 aaPredicted RBP16.5■□□□□ 0.23
SIGMAR1-202ENST00000353468 UCP3P55916 312 aa16.5■□□□□ 0.23
SIGMAR1-202ENST00000353468 ARF6P62330 175 aa16.5■□□□□ 0.23
SIGMAR1-202ENST00000353468 LOXL1Q08397 574 aaPredicted RBP16.5■□□□□ 0.23
SIGMAR1-202ENST00000353468 SURF2Q15527 256 aaPredicted RBP16.5■□□□□ 0.23
SIGMAR1-202ENST00000353468 CREB3L1Q96BA8 519 aa16.5■□□□□ 0.23
SIGMAR1-202ENST00000353468 LPAR2Q9HBW0 351 aa16.5■□□□□ 0.23
SIGMAR1-202ENST00000353468 MMP26Q9NRE1 261 aa16.5■□□□□ 0.23
SIGMAR1-202ENST00000353468 RBM7Q9Y580 266 aaKnown RBP16.5■□□□□ 0.23
SIGMAR1-202ENST00000353468 VPS13CQ709C8 3753 aa16.5■□□□□ 0.23
SIGMAR1-202ENST00000353468 M0R1W7 72 aa16.49■□□□□ 0.23
SIGMAR1-202ENST00000353468 IGHV3-7P01780 117 aa16.49■□□□□ 0.23
SIGMAR1-202ENST00000353468 BAMBIQ13145 260 aa16.49■□□□□ 0.23
SIGMAR1-202ENST00000353468 LY6G6FQ5SQ64 297 aa16.49■□□□□ 0.23
SIGMAR1-202ENST00000353468 UTF1Q5T230 341 aa16.49■□□□□ 0.23
SIGMAR1-202ENST00000353468 SECTM1Q8WVN6 248 aa16.49■□□□□ 0.23
SIGMAR1-202ENST00000353468 EDARADDQ8WWZ3 215 aa16.49■□□□□ 0.23
SIGMAR1-202ENST00000353468 SESN1Q9Y6P5 492 aa16.49■□□□□ 0.23
SIGMAR1-202ENST00000353468 HECTD1Q9ULT8 2610 aa16.48■□□□□ 0.23
SIGMAR1-202ENST00000353468 INMT-MINDY4F8WBC2 141 aa16.48■□□□□ 0.23
SIGMAR1-202ENST00000353468 RLN1P04808 185 aa16.48■□□□□ 0.23
SIGMAR1-202ENST00000353468 OR8U9P0C7N5 309 aa16.48■□□□□ 0.23
SIGMAR1-202ENST00000353468 RAB25P57735 213 aa16.48■□□□□ 0.23
SIGMAR1-202ENST00000353468 LDLRAD3Q86YD5 345 aa16.48■□□□□ 0.23
SIGMAR1-202ENST00000353468 Q8N7P7 452 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms