RNA–Protein interactions for RNA: ENST00000351842.8

USP4-202, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 1 (best) BASIC

Gene USP4, Length 3,222 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-202ENST00000351842 OR8U9P0C7N5 309 aa7.62□□□□□ -1.19
USP4-202ENST00000351842 PPIAL4GP0DN37 164 aa7.62□□□□□ -1.19
USP4-202ENST00000351842 FAM89BQ8N5H3 189 aa7.62□□□□□ -1.19
USP4-202ENST00000351842 OR8U1Q8NH10 309 aa7.62□□□□□ -1.19
USP4-202ENST00000351842 MRPL30Q8TCC3 161 aaKnown RBP7.62□□□□□ -1.19
USP4-202ENST00000351842 SMIM4Q8WVI0 70 aa7.62□□□□□ -1.19
USP4-202ENST00000351842 SNX22Q96L94 193 aa7.62□□□□□ -1.19
USP4-202ENST00000351842 C7orf50Q9BRJ6 194 aaKnown RBP7.62□□□□□ -1.19
USP4-202ENST00000351842 PLSCR3Q9NRY6 295 aa7.62□□□□□ -1.19
USP4-202ENST00000351842 FLVCR2Q9UPI3 526 aa7.62□□□□□ -1.19
USP4-202ENST00000351842 TNCP24821 2201 aa7.62□□□□□ -1.19
USP4-202ENST00000351842 SERPINE3A8MV23 424 aa7.61□□□□□ -1.19
USP4-202ENST00000351842 HBZP02008 142 aa7.61□□□□□ -1.19
USP4-202ENST00000351842 IL13RA2Q14627 380 aa7.61□□□□□ -1.19
USP4-202ENST00000351842 TMEM200BQ69YZ2 307 aa7.61□□□□□ -1.19
USP4-202ENST00000351842 ZNF561Q8N587 486 aa7.61□□□□□ -1.19
USP4-202ENST00000351842 OR4C16Q8NGL9 310 aa7.61□□□□□ -1.19
USP4-202ENST00000351842 C10orf105Q8TEF2 133 aa7.61□□□□□ -1.19
USP4-202ENST00000351842 NINJ1Q92982 152 aa7.61□□□□□ -1.19
USP4-202ENST00000351842 ZNF286AQ9HBT8 521 aa7.61□□□□□ -1.19
USP4-202ENST00000351842 LOC105371242A0A075B767 164 aa7.61□□□□□ -1.19
USP4-202ENST00000351842 FAM240BA0A1B0GVZ2 78 aa7.61□□□□□ -1.19
USP4-202ENST00000351842 GABARAPH6UMI1 98 aa7.61□□□□□ -1.19
USP4-202ENST00000351842 FABP7O15540 132 aa7.61□□□□□ -1.19
USP4-202ENST00000351842 FCGR2CP31995 323 aa7.61□□□□□ -1.19
USP4-202ENST00000351842 CD83Q01151 205 aa7.61□□□□□ -1.19
USP4-202ENST00000351842 PHLDA2Q53GA4 152 aa7.61□□□□□ -1.19
USP4-202ENST00000351842 STEAP1BQ6NZ63 245 aa7.61□□□□□ -1.19
USP4-202ENST00000351842 BTNL3Q6UXE8 466 aa7.61□□□□□ -1.19
USP4-202ENST00000351842 ZNF767PQ75MW2 155 aa7.61□□□□□ -1.19
USP4-202ENST00000351842 ABHD14BQ96IU4 210 aa7.61□□□□□ -1.19
USP4-202ENST00000351842 RBM14Q96PK6 669 aaKnown RBP7.61□□□□□ -1.19
USP4-202ENST00000351842 SUCNR1Q9BXA5 334 aa7.61□□□□□ -1.19
USP4-202ENST00000351842 TAS2R8Q9NYW2 309 aa7.61□□□□□ -1.19
USP4-202ENST00000351842 PRR13Q9NZ81 148 aa7.61□□□□□ -1.19
USP4-202ENST00000351842 HSD17B6O14756 317 aa7.61□□□□□ -1.19
USP4-202ENST00000351842 ST8SIA5O15466 376 aa7.61□□□□□ -1.19
USP4-202ENST00000351842 GSTP1P09211 210 aaKnown RBP7.61□□□□□ -1.19
USP4-202ENST00000351842 OR5H8P0DN80 308 aa7.61□□□□□ -1.19
USP4-202ENST00000351842 USF1P22415 310 aaPredicted RBP7.61□□□□□ -1.19
USP4-202ENST00000351842 CD24P25063 80 aa7.61□□□□□ -1.19
USP4-202ENST00000351842 CEACAM6P40199 344 aa7.61□□□□□ -1.19
USP4-202ENST00000351842 FAM209BQ5JX69 171 aa7.61□□□□□ -1.19
USP4-202ENST00000351842 MUC20Q8N307 709 aaPredicted RBP7.61□□□□□ -1.19
USP4-202ENST00000351842 ZNF2Q9BSG1 426 aaPredicted RBP7.61□□□□□ -1.19
USP4-202ENST00000351842 WNT2P09544 360 aa7.6□□□□□ -1.19
USP4-202ENST00000351842 FAM189A2Q15884 450 aa7.6□□□□□ -1.19
USP4-202ENST00000351842 BRD3OSQ6XYD6 125 aa7.6□□□□□ -1.19
USP4-202ENST00000351842 DMRTB1Q96MA1 342 aa7.6□□□□□ -1.19
USP4-202ENST00000351842 REG4Q9BYZ8 158 aa7.6□□□□□ -1.19
USP4-202ENST00000351842 PATZ1Q9HBE1 687 aaKnown RBP7.6□□□□□ -1.19
USP4-202ENST00000351842 HIF1ANQ9NWT6 349 aa7.6□□□□□ -1.19
USP4-202ENST00000351842 RASL12Q9NYN1 266 aa7.6□□□□□ -1.19
USP4-202ENST00000351842 COPZ2Q9P299 210 aa7.6□□□□□ -1.19
USP4-202ENST00000351842 EDARQ9UNE0 448 aa7.6□□□□□ -1.19
USP4-202ENST00000351842 PSG11Q9UQ72 335 aa7.6□□□□□ -1.19
USP4-202ENST00000351842 TANC2Q9HCD6 1990 aa7.6□□□□□ -1.19
USP4-202ENST00000351842 WNK1Q9H4A3 2382 aa7.6□□□□□ -1.19
USP4-202ENST00000351842 A0A1B0GWJ7 208 aa7.6□□□□□ -1.19
USP4-202ENST00000351842 A8MV72 311 aaPredicted RBP7.6□□□□□ -1.19
USP4-202ENST00000351842 CFHR2P36980 270 aa7.6□□□□□ -1.19
USP4-202ENST00000351842 TEX36Q5VZQ5 186 aa7.6□□□□□ -1.19
USP4-202ENST00000351842 ZNF497Q6ZNH5 498 aa7.6□□□□□ -1.19
USP4-202ENST00000351842 DNM1P46Q6ZS02 220 aa7.6□□□□□ -1.19
USP4-202ENST00000351842 C9orf62Q8N4C0 152 aa7.6□□□□□ -1.19
USP4-202ENST00000351842 GPX8Q8TED1 209 aa7.6□□□□□ -1.19
USP4-202ENST00000351842 HYLS1Q96M11 299 aa7.6□□□□□ -1.19
USP4-202ENST00000351842 BARX1Q9HBU1 254 aaPredicted RBP7.6□□□□□ -1.19
USP4-202ENST00000351842 CALYQ9NYX4 217 aa7.6□□□□□ -1.19
USP4-202ENST00000351842 MTFP1Q9UDX5 166 aa7.6□□□□□ -1.19
USP4-202ENST00000351842 MIOXQ9UGB7 285 aa7.6□□□□□ -1.19
USP4-202ENST00000351842 ANXA10Q9UJ72 324 aa7.6□□□□□ -1.19
USP4-202ENST00000351842 NSD1Q96L73 2696 aaPredicted RBP7.6□□□□□ -1.19
USP4-202ENST00000351842 IGHV3-72A0A0B4J1Y9 119 aa7.59□□□□□ -1.19
USP4-202ENST00000351842 INMT-MINDY4F8WBC2 141 aa7.59□□□□□ -1.19
USP4-202ENST00000351842 TOR1AO14656 332 aa7.59□□□□□ -1.19
USP4-202ENST00000351842 SPINT2O43291 252 aa7.59□□□□□ -1.19
USP4-202ENST00000351842 AKR1C4P17516 323 aa7.59□□□□□ -1.19
USP4-202ENST00000351842 CFPP27918 469 aa7.59□□□□□ -1.19
USP4-202ENST00000351842 ACTBP60709 375 aa7.59□□□□□ -1.19
USP4-202ENST00000351842 UBE2MP61081 183 aaKnown RBP7.59□□□□□ -1.19
USP4-202ENST00000351842 ACTG1P63261 375 aa7.59□□□□□ -1.19
USP4-202ENST00000351842 DYRK1AQ13627 763 aa7.59□□□□□ -1.19
USP4-202ENST00000351842 CD276Q5ZPR3 534 aa7.59□□□□□ -1.19
USP4-202ENST00000351842 OR10J5Q8NHC4 309 aa7.59□□□□□ -1.19
USP4-202ENST00000351842 PTX4Q96A99 478 aa7.59□□□□□ -1.19
USP4-202ENST00000351842 GALMQ96C23 342 aa7.59□□□□□ -1.19
USP4-202ENST00000351842 SDSLQ96GA7 329 aa7.59□□□□□ -1.19
USP4-202ENST00000351842 ZNF714Q96N38 554 aa7.59□□□□□ -1.19
USP4-202ENST00000351842 NUDT15Q9NV35 164 aa7.59□□□□□ -1.19
USP4-202ENST00000351842 RPUSD1Q9UJJ7 312 aaKnown RBP7.59□□□□□ -1.19
USP4-202ENST00000351842 HILPDAQ9Y5L2 63 aa7.59□□□□□ -1.19
USP4-202ENST00000351842 NUBP2Q9Y5Y2 271 aa7.59□□□□□ -1.19
USP4-202ENST00000351842 SOX21Q9Y651 276 aaPredicted RBP7.59□□□□□ -1.19
USP4-202ENST00000351842 hADV38S2A0JD32 116 aa7.59□□□□□ -1.19
USP4-202ENST00000351842 ARHGDIBP52566 201 aa7.59□□□□□ -1.19
USP4-202ENST00000351842 FAM219AQ8IW50 185 aa7.59□□□□□ -1.19
USP4-202ENST00000351842 OR5D13Q8NGL4 314 aa7.59□□□□□ -1.19
USP4-202ENST00000351842 LHX4Q969G2 390 aa7.59□□□□□ -1.19
USP4-202ENST00000351842 RCC2Q9P258 522 aaKnown RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms