RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 EFNA2O43921 213 aa12.78□□□□□ -0.36
TRAF3-202ENST00000351691 OR2J2O76002 312 aa12.78□□□□□ -0.36
TRAF3-202ENST00000351691 CNOT4O95628 575 aaKnown RBP12.78□□□□□ -0.36
TRAF3-202ENST00000351691 GYPAP02724 150 aa12.78□□□□□ -0.36
TRAF3-202ENST00000351691 WNT2P09544 360 aa12.78□□□□□ -0.36
TRAF3-202ENST00000351691 GUCA1AP43080 201 aaPredicted RBP12.78□□□□□ -0.36
TRAF3-202ENST00000351691 HBG1P69891 147 aa12.78□□□□□ -0.36
TRAF3-202ENST00000351691 HBG2P69892 147 aa12.78□□□□□ -0.36
TRAF3-202ENST00000351691 ENDOGQ14249 297 aaKnown RBP12.78□□□□□ -0.36
TRAF3-202ENST00000351691 SHBQ15464 509 aa12.78□□□□□ -0.36
TRAF3-202ENST00000351691 RSPO1Q2MKA7 263 aaPredicted RBP12.78□□□□□ -0.36
TRAF3-202ENST00000351691 C10orf128Q5T292 105 aa12.78□□□□□ -0.36
TRAF3-202ENST00000351691 CARD17Q5XLA6 110 aa12.78□□□□□ -0.36
TRAF3-202ENST00000351691 Q6ZPA2 131 aa12.78□□□□□ -0.36
TRAF3-202ENST00000351691 TMEM144Q7Z5S9 345 aa12.78□□□□□ -0.36
TRAF3-202ENST00000351691 LHX4Q969G2 390 aa12.78□□□□□ -0.36
TRAF3-202ENST00000351691 GAL3ST2Q9H3Q3 398 aa12.78□□□□□ -0.36
TRAF3-202ENST00000351691 SLC39A9Q9NUM3 307 aa12.78□□□□□ -0.36
TRAF3-202ENST00000351691 AURKAIP1Q9NWT8 199 aaPredicted RBP12.78□□□□□ -0.36
TRAF3-202ENST00000351691 MYO7BQ6PIF6 2116 aa12.78□□□□□ -0.36
TRAF3-202ENST00000351691 SPAG17Q6Q759 2223 aa12.78□□□□□ -0.36
TRAF3-202ENST00000351691 IGKV1-27A0A075B6S5 117 aa12.78□□□□□ -0.36
TRAF3-202ENST00000351691 LILRA1O75019 489 aa12.78□□□□□ -0.36
TRAF3-202ENST00000351691 SCRG1O75711 98 aa12.78□□□□□ -0.36
TRAF3-202ENST00000351691 TUSC2O75896 110 aa12.78□□□□□ -0.36
TRAF3-202ENST00000351691 MYF5P13349 255 aa12.78□□□□□ -0.36
TRAF3-202ENST00000351691 EDN3P14138 238 aa12.78□□□□□ -0.36
TRAF3-202ENST00000351691 GNG10P50151 68 aa12.78□□□□□ -0.36
TRAF3-202ENST00000351691 SPIN3Q5JUX0 258 aa12.78□□□□□ -0.36
TRAF3-202ENST00000351691 ZNF818PQ6ZRF7 136 aa12.78□□□□□ -0.36
TRAF3-202ENST00000351691 OR2M3Q8NG83 312 aa12.78□□□□□ -0.36
TRAF3-202ENST00000351691 MAFAQ8NHW3 353 aaPredicted RBP12.78□□□□□ -0.36
TRAF3-202ENST00000351691 MRPL30Q8TCC3 161 aaKnown RBP12.78□□□□□ -0.36
TRAF3-202ENST00000351691 THAP3Q8WTV1 239 aaPredicted RBP12.78□□□□□ -0.36
TRAF3-202ENST00000351691 SPTSSAQ969W0 71 aa12.78□□□□□ -0.36
TRAF3-202ENST00000351691 METTL7AQ9H8H3 244 aa12.78□□□□□ -0.36
TRAF3-202ENST00000351691 TRAPPC1Q9Y5R8 145 aa12.78□□□□□ -0.36
TRAF3-202ENST00000351691 M0R135 149 aa12.77□□□□□ -0.36
TRAF3-202ENST00000351691 SELEP16581 610 aa12.77□□□□□ -0.36
TRAF3-202ENST00000351691 TPPP2P59282 170 aa12.77□□□□□ -0.36
TRAF3-202ENST00000351691 TPTE2P1Q5T6R2 138 aa12.77□□□□□ -0.36
TRAF3-202ENST00000351691 C20orf196Q8IYI0 205 aa12.77□□□□□ -0.36
TRAF3-202ENST00000351691 GAPTQ8N292 157 aa12.77□□□□□ -0.36
TRAF3-202ENST00000351691 RPUSD4Q96CM3 377 aaKnown RBP12.77□□□□□ -0.36
TRAF3-202ENST00000351691 ZNF799Q96GE5 643 aa12.77□□□□□ -0.36
TRAF3-202ENST00000351691 OR6C1Q96RD1 312 aa12.77□□□□□ -0.36
TRAF3-202ENST00000351691 WDR61Q9GZS3 305 aaKnown RBP12.77□□□□□ -0.36
TRAF3-202ENST00000351691 FAM90A10PA6NDY2 464 aa12.77□□□□□ -0.37
TRAF3-202ENST00000351691 FAM90A18PA6NE21 464 aa12.77□□□□□ -0.37
TRAF3-202ENST00000351691 FAM90A16PA6NEW6 464 aa12.77□□□□□ -0.37
TRAF3-202ENST00000351691 FAM90A20PA6NIJ5 464 aa12.77□□□□□ -0.37
TRAF3-202ENST00000351691 FAM90A8PA6NJQ4 464 aa12.77□□□□□ -0.37
TRAF3-202ENST00000351691 FAM90A7PA6NKC0 464 aa12.77□□□□□ -0.37
TRAF3-202ENST00000351691 FAM90A22PA8MWA6 464 aa12.77□□□□□ -0.37
TRAF3-202ENST00000351691 FAM90A12PA8MX19 464 aa12.77□□□□□ -0.37
TRAF3-202ENST00000351691 FAM90A5PA8MXJ8 464 aa12.77□□□□□ -0.37
TRAF3-202ENST00000351691 FAM90A23PA8MXZ1 464 aa12.77□□□□□ -0.37
TRAF3-202ENST00000351691 ITGB1BP1O14713 200 aa12.77□□□□□ -0.37
TRAF3-202ENST00000351691 SIAH2O43255 324 aa12.77□□□□□ -0.37
TRAF3-202ENST00000351691 FAM90A15PP0C7V4 464 aa12.77□□□□□ -0.37
TRAF3-202ENST00000351691 FAM90A13PP0C7W8 464 aa12.77□□□□□ -0.37
TRAF3-202ENST00000351691 FAM90A14PP0C7W9 464 aa12.77□□□□□ -0.37
TRAF3-202ENST00000351691 FAM90A24PP0C7X0 464 aa12.77□□□□□ -0.37
TRAF3-202ENST00000351691 IL3RAP26951 378 aa12.77□□□□□ -0.37
TRAF3-202ENST00000351691 SELENOTP62341 195 aa12.77□□□□□ -0.37
TRAF3-202ENST00000351691 TMEM267Q0VDI3 215 aaPredicted RBP12.77□□□□□ -0.37
TRAF3-202ENST00000351691 FOXL1Q12952 345 aa12.77□□□□□ -0.37
TRAF3-202ENST00000351691 PIGYQ3MUY2 71 aa12.77□□□□□ -0.37
TRAF3-202ENST00000351691 TMEM42Q69YG0 159 aa12.77□□□□□ -0.37
TRAF3-202ENST00000351691 BORCS8Q96FH0 119 aa12.77□□□□□ -0.37
TRAF3-202ENST00000351691 ST3GAL6Q9Y274 331 aa12.77□□□□□ -0.37
TRAF3-202ENST00000351691 MLNRO43193 412 aa12.76□□□□□ -0.37
TRAF3-202ENST00000351691 CTXN2P0C2S0 81 aa12.76□□□□□ -0.37
TRAF3-202ENST00000351691 RBM11P57052 281 aaKnown RBP12.76□□□□□ -0.37
TRAF3-202ENST00000351691 CDCP2Q5VXM1 449 aa12.76□□□□□ -0.37
TRAF3-202ENST00000351691 TMEM256Q8N2U0 113 aa12.76□□□□□ -0.37
TRAF3-202ENST00000351691 CMTM2Q8TAZ6 248 aa12.76□□□□□ -0.37
TRAF3-202ENST00000351691 NAT6Q93015 286 aa12.76□□□□□ -0.37
TRAF3-202ENST00000351691 CLDN23Q96B33 292 aa12.76□□□□□ -0.37
TRAF3-202ENST00000351691 GPR146Q96CH1 333 aa12.76□□□□□ -0.37
TRAF3-202ENST00000351691 SDSLQ96GA7 329 aa12.76□□□□□ -0.37
TRAF3-202ENST00000351691 IGKV1-12A0A0C4DH73 117 aa12.76□□□□□ -0.37
TRAF3-202ENST00000351691 OR6C6A6NF89 314 aa12.76□□□□□ -0.37
TRAF3-202ENST00000351691 SLC22A20A6NK97 555 aa12.76□□□□□ -0.37
TRAF3-202ENST00000351691 IGKV1D-12P01611 117 aa12.76□□□□□ -0.37
TRAF3-202ENST00000351691 YPEL3P61236 119 aaPredicted RBP12.76□□□□□ -0.37
TRAF3-202ENST00000351691 PPP1CBP62140 327 aa12.76□□□□□ -0.37
TRAF3-202ENST00000351691 OR5I1Q13606 314 aa12.76□□□□□ -0.37
TRAF3-202ENST00000351691 FAM69BQ5VUD6 431 aa12.76□□□□□ -0.37
TRAF3-202ENST00000351691 TOMM20LQ6UXN7 152 aa12.76□□□□□ -0.37
TRAF3-202ENST00000351691 FADS6Q8N9I5 356 aa12.76□□□□□ -0.37
TRAF3-202ENST00000351691 STRADBQ9C0K7 418 aa12.76□□□□□ -0.37
TRAF3-202ENST00000351691 OR51B6Q9H340 312 aa12.76□□□□□ -0.37
TRAF3-202ENST00000351691 CHODLQ9H9P2 273 aa12.76□□□□□ -0.37
TRAF3-202ENST00000351691 SEC16AO15027 2179 aa12.75□□□□□ -0.37
TRAF3-202ENST00000351691 SHANK1Q9Y566 2161 aa12.75□□□□□ -0.37
TRAF3-202ENST00000351691 CTXND1A0A1B0GTU2 59 aa12.75□□□□□ -0.37
TRAF3-202ENST00000351691 AQP7P3A6NL99 342 aa12.75□□□□□ -0.37
TRAF3-202ENST00000351691 MMP23AO75900 390 aa12.75□□□□□ -0.37
TRAF3-202ENST00000351691 DKK1O94907 266 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms