RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 POC1AQ8NBT0 407 aa11.81□□□□□ -0.52
TRIM4-201ENST00000349062 OR10V1Q8NGI7 309 aa11.81□□□□□ -0.52
TRIM4-201ENST00000349062 DCTN5Q9BTE1 182 aa11.81□□□□□ -0.52
TRIM4-201ENST00000349062 TMEM100Q9NV29 134 aa11.81□□□□□ -0.52
TRIM4-201ENST00000349062 WRBO00258 174 aa11.8□□□□□ -0.52
TRIM4-201ENST00000349062 ADAM20O43506 726 aa11.8□□□□□ -0.52
TRIM4-201ENST00000349062 OR2H2O95918 312 aa11.8□□□□□ -0.52
TRIM4-201ENST00000349062 HOXB1P14653 301 aaPredicted RBP11.8□□□□□ -0.52
TRIM4-201ENST00000349062 RAB5AP20339 215 aa11.8□□□□□ -0.52
TRIM4-201ENST00000349062 FAM213BQ8TBF2 198 aa11.8□□□□□ -0.52
TRIM4-201ENST00000349062 TACC2O95359 2948 aa11.8□□□□□ -0.52
TRIM4-201ENST00000349062 FAM24AA6NFZ4 105 aa11.8□□□□□ -0.52
TRIM4-201ENST00000349062 ZNF891A8MT65 544 aaPredicted RBP11.8□□□□□ -0.52
TRIM4-201ENST00000349062 SPRY3O43610 288 aa11.8□□□□□ -0.52
TRIM4-201ENST00000349062 PET100P0DJ07 73 aa11.8□□□□□ -0.52
TRIM4-201ENST00000349062 ZNF674Q2M3X9 581 aa11.8□□□□□ -0.52
TRIM4-201ENST00000349062 KRTAP27-1Q3LI81 207 aa11.8□□□□□ -0.52
TRIM4-201ENST00000349062 C15orf54Q8N8G6 183 aa11.8□□□□□ -0.52
TRIM4-201ENST00000349062 IGKV1-6A0A0C4DH72 117 aa11.79□□□□□ -0.52
TRIM4-201ENST00000349062 MPPED1O15442 326 aa11.79□□□□□ -0.52
TRIM4-201ENST00000349062 S100A2P29034 98 aa11.79□□□□□ -0.52
TRIM4-201ENST00000349062 LINC00205P59089 165 aa11.79□□□□□ -0.52
TRIM4-201ENST00000349062 CXorf66Q5JRM2 361 aaPredicted RBP11.79□□□□□ -0.52
TRIM4-201ENST00000349062 Q6ZT83 130 aa11.79□□□□□ -0.52
TRIM4-201ENST00000349062 PLPPR1Q8TBJ4 325 aa11.79□□□□□ -0.52
TRIM4-201ENST00000349062 EDARADDQ8WWZ3 215 aa11.79□□□□□ -0.52
TRIM4-201ENST00000349062 CNTNAP3Q9BZ76 1288 aa11.79□□□□□ -0.52
TRIM4-201ENST00000349062 OR51M1Q9H341 326 aa11.79□□□□□ -0.52
TRIM4-201ENST00000349062 Q9N2K0 584 aa11.79□□□□□ -0.52
TRIM4-201ENST00000349062 CACFD1Q9UGQ2 172 aa11.79□□□□□ -0.52
TRIM4-201ENST00000349062 ATXN7O15265 892 aaPredicted RBP11.79□□□□□ -0.52
TRIM4-201ENST00000349062 GPR37O15354 613 aa11.79□□□□□ -0.52
TRIM4-201ENST00000349062 RBMXL2O75526 392 aaKnown RBP11.79□□□□□ -0.52
TRIM4-201ENST00000349062 MPZP25189 248 aa11.79□□□□□ -0.52
TRIM4-201ENST00000349062 NAAAQ02083 359 aa11.79□□□□□ -0.52
TRIM4-201ENST00000349062 MRGPRDQ8TDS7 321 aa11.79□□□□□ -0.52
TRIM4-201ENST00000349062 PRRX2Q99811 253 aa11.79□□□□□ -0.52
TRIM4-201ENST00000349062 ANAPC10Q9UM13 185 aa11.79□□□□□ -0.52
TRIM4-201ENST00000349062 KPTNQ9Y664 436 aa11.79□□□□□ -0.52
TRIM4-201ENST00000349062 MAP1AP78559 2803 aaPredicted RBP11.79□□□□□ -0.52
TRIM4-201ENST00000349062 CST4P01036 141 aa11.79□□□□□ -0.52
TRIM4-201ENST00000349062 SULT1A1P50225 295 aa11.79□□□□□ -0.52
TRIM4-201ENST00000349062 DEFA6Q01524 100 aa11.79□□□□□ -0.52
TRIM4-201ENST00000349062 TMEM187Q14656 261 aa11.79□□□□□ -0.52
TRIM4-201ENST00000349062 TMEM211Q6ICI0 200 aa11.79□□□□□ -0.52
TRIM4-201ENST00000349062 LGI3Q8N145 548 aa11.79□□□□□ -0.52
TRIM4-201ENST00000349062 CLCF1Q9UBD9 225 aa11.79□□□□□ -0.52
TRIM4-201ENST00000349062 SERPINE2P07093 398 aa11.78□□□□□ -0.52
TRIM4-201ENST00000349062 FAM27E3Q08E93 113 aa11.78□□□□□ -0.52
TRIM4-201ENST00000349062 ACSF3Q4G176 576 aaPredicted RBP11.78□□□□□ -0.52
TRIM4-201ENST00000349062 C4orf17Q53FE4 359 aa11.78□□□□□ -0.52
TRIM4-201ENST00000349062 CDPF1Q6NVV7 123 aa11.78□□□□□ -0.52
TRIM4-201ENST00000349062 LIAT1Q6ZQX7 453 aa11.78□□□□□ -0.52
TRIM4-201ENST00000349062 CCDC71LQ8N9Z2 235 aa11.78□□□□□ -0.52
TRIM4-201ENST00000349062 MOB3AQ96BX8 217 aa11.78□□□□□ -0.52
TRIM4-201ENST00000349062 PRO1933Q9H354 126 aa11.78□□□□□ -0.52
TRIM4-201ENST00000349062 PLA2G2EQ9NZK7 142 aa11.78□□□□□ -0.52
TRIM4-201ENST00000349062 MPC1Q9Y5U8 109 aa11.78□□□□□ -0.52
TRIM4-201ENST00000349062 YLPM1P49750 1951 aaKnown RBP11.78□□□□□ -0.52
TRIM4-201ENST00000349062 OR2C1O95371 312 aa11.78□□□□□ -0.52
TRIM4-201ENST00000349062 HKR1P10072 659 aa11.78□□□□□ -0.52
TRIM4-201ENST00000349062 HLA-GP17693 338 aa11.78□□□□□ -0.52
TRIM4-201ENST00000349062 OR3A1P47881 315 aa11.78□□□□□ -0.52
TRIM4-201ENST00000349062 RNF212Q495C1 297 aa11.78□□□□□ -0.52
TRIM4-201ENST00000349062 BTNL3Q6UXE8 466 aa11.78□□□□□ -0.52
TRIM4-201ENST00000349062 TMEM182Q6ZP80 229 aaPredicted RBP11.78□□□□□ -0.52
TRIM4-201ENST00000349062 CMTM1Q8IZ96 169 aa11.78□□□□□ -0.52
TRIM4-201ENST00000349062 ZCCHC24Q8N2G6 241 aaKnown RBP11.78□□□□□ -0.52
TRIM4-201ENST00000349062 SAT2Q96F10 170 aaPredicted RBP11.78□□□□□ -0.52
TRIM4-201ENST00000349062 TOLLIPQ9H0E2 274 aa11.78□□□□□ -0.52
TRIM4-201ENST00000349062 METRNQ9UJH8 293 aa11.78□□□□□ -0.52
TRIM4-201ENST00000349062 LRBAP50851 2863 aa11.78□□□□□ -0.52
TRIM4-201ENST00000349062 TRDCB7Z8K6 153 aa11.78□□□□□ -0.52
TRIM4-201ENST00000349062 OR8U8P0C7N1 319 aa11.78□□□□□ -0.52
TRIM4-201ENST00000349062 RNF224P0DH78 156 aa11.78□□□□□ -0.52
TRIM4-201ENST00000349062 CEACAM6P40199 344 aa11.78□□□□□ -0.52
TRIM4-201ENST00000349062 VAMP2P63027 116 aa11.78□□□□□ -0.52
TRIM4-201ENST00000349062 ASCL4Q6XD76 172 aa11.78□□□□□ -0.52
TRIM4-201ENST00000349062 SMIM8Q96KF7 97 aa11.78□□□□□ -0.52
TRIM4-201ENST00000349062 TECTBQ96PL2 329 aa11.78□□□□□ -0.52
TRIM4-201ENST00000349062 SH3BGRL3Q9H299 93 aa11.78□□□□□ -0.52
TRIM4-201ENST00000349062 OR51I2Q9H344 312 aa11.78□□□□□ -0.52
TRIM4-201ENST00000349062 NUDT19A8MXV4 375 aa11.77□□□□□ -0.53
TRIM4-201ENST00000349062 J3QT63 122 aa11.77□□□□□ -0.53
TRIM4-201ENST00000349062 AP4M1O00189 453 aa11.77□□□□□ -0.53
TRIM4-201ENST00000349062 C10orf91Q5T1B1 145 aa11.77□□□□□ -0.53
TRIM4-201ENST00000349062 SLC25A24Q6NUK1 477 aa11.77□□□□□ -0.53
TRIM4-201ENST00000349062 ASCL5Q7RTU5 278 aa11.77□□□□□ -0.53
TRIM4-201ENST00000349062 FAM212BQ9NTI7 297 aaPredicted RBP11.77□□□□□ -0.53
TRIM4-201ENST00000349062 OR5B21A6NL26 309 aa11.77□□□□□ -0.53
TRIM4-201ENST00000349062 IAPPP10997 89 aa11.77□□□□□ -0.53
TRIM4-201ENST00000349062 PSG2P11465 335 aa11.77□□□□□ -0.53
TRIM4-201ENST00000349062 CD82P27701 267 aa11.77□□□□□ -0.53
TRIM4-201ENST00000349062 SRSF4Q08170 494 aaKnown RBP11.77□□□□□ -0.53
TRIM4-201ENST00000349062 GNMTQ14749 295 aa11.77□□□□□ -0.53
TRIM4-201ENST00000349062 HAGHQ16775 308 aa11.77□□□□□ -0.53
TRIM4-201ENST00000349062 NRN1LQ496H8 165 aa11.77□□□□□ -0.53
TRIM4-201ENST00000349062 SPINK9Q5DT21 86 aa11.77□□□□□ -0.53
TRIM4-201ENST00000349062 LURAP1LQ8IV03 231 aa11.77□□□□□ -0.53
TRIM4-201ENST00000349062 OR10D4PQ8NGN7 298 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms