RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 OCSTAMPQ9BR26 566 aa13.12□□□□□ -0.31
RAB5C-201ENST00000346213 PECRQ9BY49 303 aa13.12□□□□□ -0.31
RAB5C-201ENST00000346213 CHIAQ9BZP6 476 aa13.12□□□□□ -0.31
RAB5C-201ENST00000346213 MED28Q9H204 178 aa13.12□□□□□ -0.31
RAB5C-201ENST00000346213 IFT46Q9NQC8 304 aa13.12□□□□□ -0.31
RAB5C-201ENST00000346213 ZNF581Q9P0T4 197 aa13.12□□□□□ -0.31
RAB5C-201ENST00000346213 SERPINE3A8MV23 424 aa13.12□□□□□ -0.31
RAB5C-201ENST00000346213 PSPNO60542 156 aa13.12□□□□□ -0.31
RAB5C-201ENST00000346213 IGHV4-59P01825 116 aa13.12□□□□□ -0.31
RAB5C-201ENST00000346213 FCER2P06734 321 aa13.12□□□□□ -0.31
RAB5C-201ENST00000346213 TBPP20226 339 aa13.12□□□□□ -0.31
RAB5C-201ENST00000346213 AWAT1Q58HT5 328 aa13.12□□□□□ -0.31
RAB5C-201ENST00000346213 TMEM200BQ69YZ2 307 aa13.12□□□□□ -0.31
RAB5C-201ENST00000346213 Q6YL49 198 aa13.12□□□□□ -0.31
RAB5C-201ENST00000346213 C17orf107Q6ZR85 190 aa13.12□□□□□ -0.31
RAB5C-201ENST00000346213 SAXO1Q8IYX7 474 aa13.12□□□□□ -0.31
RAB5C-201ENST00000346213 TCTE3Q8IZS6 198 aa13.12□□□□□ -0.31
RAB5C-201ENST00000346213 GVQW1Q8N7I0 195 aa13.12□□□□□ -0.31
RAB5C-201ENST00000346213 Q8NFD4 153 aa13.12□□□□□ -0.31
RAB5C-201ENST00000346213 CYYR1Q96J86 154 aa13.12□□□□□ -0.31
RAB5C-201ENST00000346213 GINS4Q9BRT9 223 aa13.12□□□□□ -0.31
RAB5C-201ENST00000346213 TINAGL1Q9GZM7 467 aaPredicted RBP13.12□□□□□ -0.31
RAB5C-201ENST00000346213 RANGRFQ9HD47 186 aaPredicted RBP13.12□□□□□ -0.31
RAB5C-201ENST00000346213 POLDIP2Q9Y2S7 368 aa13.12□□□□□ -0.31
RAB5C-201ENST00000346213 DISC1C4P0D8 188 aa13.11□□□□□ -0.31
RAB5C-201ENST00000346213 M0QYG6 137 aa13.11□□□□□ -0.31
RAB5C-201ENST00000346213 KNG1P01042 644 aa13.11□□□□□ -0.31
RAB5C-201ENST00000346213 TK1P04183 234 aa13.11□□□□□ -0.31
RAB5C-201ENST00000346213 AMY2AP04746 511 aa13.11□□□□□ -0.31
RAB5C-201ENST00000346213 SNU13P55769 128 aaKnown RBP13.11□□□□□ -0.31
RAB5C-201ENST00000346213 PDCD1Q15116 288 aa13.11□□□□□ -0.31
RAB5C-201ENST00000346213 LDLRAD2Q5SZI1 272 aa13.11□□□□□ -0.31
RAB5C-201ENST00000346213 MKXQ8IYA7 352 aa13.11□□□□□ -0.31
RAB5C-201ENST00000346213 FAM185AQ8N0U4 392 aa13.11□□□□□ -0.31
RAB5C-201ENST00000346213 OSR2Q8N2R0 312 aa13.11□□□□□ -0.31
RAB5C-201ENST00000346213 TPRX1Q8N7U7 411 aa13.11□□□□□ -0.31
RAB5C-201ENST00000346213 SLC25A21Q9BQT8 299 aaPredicted RBP13.11□□□□□ -0.31
RAB5C-201ENST00000346213 ING3Q9NXR8 418 aa13.11□□□□□ -0.31
RAB5C-201ENST00000346213 SLC2A8Q9NY64 477 aa13.11□□□□□ -0.31
RAB5C-201ENST00000346213 SCP2D1Q9UJQ7 156 aa13.11□□□□□ -0.31
RAB5C-201ENST00000346213 HSF4Q9ULV5 492 aa13.11□□□□□ -0.31
RAB5C-201ENST00000346213 NBEAL1Q6ZS30 2694 aa13.1□□□□□ -0.31
RAB5C-201ENST00000346213 CLDN34H7C241 214 aa13.1□□□□□ -0.31
RAB5C-201ENST00000346213 HKR1P10072 659 aa13.1□□□□□ -0.31
RAB5C-201ENST00000346213 OMGP23515 440 aa13.1□□□□□ -0.31
RAB5C-201ENST00000346213 CD83Q01151 205 aa13.1□□□□□ -0.31
RAB5C-201ENST00000346213 RNASE10Q5GAN6 216 aaKnown RBP13.1□□□□□ -0.31
RAB5C-201ENST00000346213 GLDNQ6ZMI3 551 aaPredicted RBP13.1□□□□□ -0.31
RAB5C-201ENST00000346213 OR4S1Q8NGB4 309 aa13.1□□□□□ -0.31
RAB5C-201ENST00000346213 JMJD8Q96S16 334 aa13.1□□□□□ -0.31
RAB5C-201ENST00000346213 K7N7A8 449 aa13.09□□□□□ -0.31
RAB5C-201ENST00000346213 GPR37O15354 613 aa13.09□□□□□ -0.31
RAB5C-201ENST00000346213 ARFRP1Q13795 201 aa13.09□□□□□ -0.31
RAB5C-201ENST00000346213 FCN2Q15485 313 aa13.09□□□□□ -0.31
RAB5C-201ENST00000346213 TAF9Q16594 264 aa13.09□□□□□ -0.31
RAB5C-201ENST00000346213 ACTBL2Q562R1 376 aa13.09□□□□□ -0.31
RAB5C-201ENST00000346213 ZNF561Q8N587 486 aa13.09□□□□□ -0.31
RAB5C-201ENST00000346213 EMG1Q92979 244 aaKnown RBP13.09□□□□□ -0.31
RAB5C-201ENST00000346213 FYTTD1Q96QD9 318 aaKnown RBP13.09□□□□□ -0.31
RAB5C-201ENST00000346213 ARPC5LQ9BPX5 153 aa13.09□□□□□ -0.31
RAB5C-201ENST00000346213 CHST6Q9GZX3 395 aa13.09□□□□□ -0.31
RAB5C-201ENST00000346213 UNKLQ9H9P5 680 aaKnown RBP13.09□□□□□ -0.31
RAB5C-201ENST00000346213 BEX1Q9HBH7 125 aa13.09□□□□□ -0.31
RAB5C-201ENST00000346213 SNRPGP15A8MWD9 76 aa13.08□□□□□ -0.31
RAB5C-201ENST00000346213 GABRR1P24046 479 aa13.08□□□□□ -0.31
RAB5C-201ENST00000346213 SAA4P35542 130 aa13.08□□□□□ -0.31
RAB5C-201ENST00000346213 ZFP69Q49AA0 526 aa13.08□□□□□ -0.31
RAB5C-201ENST00000346213 UTF1Q5T230 341 aa13.08□□□□□ -0.31
RAB5C-201ENST00000346213 SIGIRRQ6IA17 410 aa13.08□□□□□ -0.31
RAB5C-201ENST00000346213 ELP2Q6IA86 826 aa13.08□□□□□ -0.31
RAB5C-201ENST00000346213 OR52W1Q6IF63 320 aa13.08□□□□□ -0.31
RAB5C-201ENST00000346213 IDO2Q6ZQW0 420 aa13.08□□□□□ -0.31
RAB5C-201ENST00000346213 HOGA1Q86XE5 327 aa13.08□□□□□ -0.31
RAB5C-201ENST00000346213 BEST4Q8NFU0 473 aa13.08□□□□□ -0.31
RAB5C-201ENST00000346213 SNAPC3Q92966 411 aa13.08□□□□□ -0.31
RAB5C-201ENST00000346213 PRRT1Q99946 306 aa13.08□□□□□ -0.31
RAB5C-201ENST00000346213 ALX4Q9H161 411 aaPredicted RBP13.08□□□□□ -0.31
RAB5C-201ENST00000346213 GPN1Q9HCN4 374 aaPredicted RBP13.08□□□□□ -0.31
RAB5C-201ENST00000346213 PLEKHJ1Q9NW61 149 aa13.08□□□□□ -0.31
RAB5C-201ENST00000346213 FAM181BA6NEQ2 426 aa13.08□□□□□ -0.32
RAB5C-201ENST00000346213 M0R1W7 72 aa13.08□□□□□ -0.32
RAB5C-201ENST00000346213 NPFFO15130 113 aa13.08□□□□□ -0.32
RAB5C-201ENST00000346213 HAND1O96004 215 aa13.08□□□□□ -0.32
RAB5C-201ENST00000346213 SULT1A3P0DMM9 295 aa13.08□□□□□ -0.32
RAB5C-201ENST00000346213 SULT1A4P0DMN0 295 aa13.08□□□□□ -0.32
RAB5C-201ENST00000346213 MDKP21741 143 aaPredicted RBP13.08□□□□□ -0.32
RAB5C-201ENST00000346213 OR3A1P47881 315 aa13.08□□□□□ -0.32
RAB5C-201ENST00000346213 RPL31P62899 125 aaKnown RBP13.08□□□□□ -0.32
RAB5C-201ENST00000346213 C12orf54Q6X4T0 127 aa13.08□□□□□ -0.32
RAB5C-201ENST00000346213 RBMS3Q6XE24 437 aaKnown RBP13.08□□□□□ -0.32
RAB5C-201ENST00000346213 C6orf201Q7Z4U5 140 aa13.08□□□□□ -0.32
RAB5C-201ENST00000346213 LDLRAD3Q86YD5 345 aa13.08□□□□□ -0.32
RAB5C-201ENST00000346213 DYNAPQ8N1N2 210 aa13.08□□□□□ -0.32
RAB5C-201ENST00000346213 ASCC1Q8N9N2 400 aaKnown RBP13.08□□□□□ -0.32
RAB5C-201ENST00000346213 OR4K15Q8NH41 348 aa13.08□□□□□ -0.32
RAB5C-201ENST00000346213 DMRTB1Q96MA1 342 aa13.08□□□□□ -0.32
RAB5C-201ENST00000346213 ZNRD1Q9P1U0 126 aa13.08□□□□□ -0.32
RAB5C-201ENST00000346213 ST3GAL6Q9Y274 331 aa13.08□□□□□ -0.32
RAB5C-201ENST00000346213 PKD1L1Q8TDX9 2849 aa13.08□□□□□ -0.32
RAB5C-201ENST00000346213 CMYA5Q8N3K9 4069 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms