RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 ASB13Q8WXK3 278 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 SYT3Q9BQG1 590 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 PIGMQ9H3S5 423 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 UNKLQ9H9P5 680 aaKnown RBP7.78□□□□□ -1.16
ATG4A-202ENST00000345734 RHOFQ9HBH0 211 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 OR14J1Q9UGF5 321 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 TRAV39A0A0B4J263 110 aa7.77□□□□□ -1.17
ATG4A-202ENST00000345734 IGKV1-6A0A0C4DH72 117 aa7.77□□□□□ -1.17
ATG4A-202ENST00000345734 C13orf42A0A1B0GVH6 325 aa7.77□□□□□ -1.17
ATG4A-202ENST00000345734 C5orf51A6NDU8 294 aa7.77□□□□□ -1.17
ATG4A-202ENST00000345734 RFPL4AA6NLU0 287 aa7.77□□□□□ -1.17
ATG4A-202ENST00000345734 HMSDA8MTL9 139 aa7.77□□□□□ -1.17
ATG4A-202ENST00000345734 RFPL4AL1F8VTS6 287 aa7.77□□□□□ -1.17
ATG4A-202ENST00000345734 ADAP1O75689 374 aa7.77□□□□□ -1.17
ATG4A-202ENST00000345734 TFF1P04155 84 aa7.77□□□□□ -1.17
ATG4A-202ENST00000345734 RCC1P18754 421 aaPredicted RBP7.77□□□□□ -1.17
ATG4A-202ENST00000345734 GLP1RP43220 463 aa7.77□□□□□ -1.17
ATG4A-202ENST00000345734 PIGPP57054 158 aa7.77□□□□□ -1.17
ATG4A-202ENST00000345734 SNTB1Q13884 538 aaKnown RBP7.77□□□□□ -1.17
ATG4A-202ENST00000345734 ZNF146Q15072 292 aa7.77□□□□□ -1.17
ATG4A-202ENST00000345734 SRSF7Q16629 238 aaKnown RBP eCLIP7.77□□□□□ -1.17
ATG4A-202ENST00000345734 C3orf36Q3SXR2 165 aa7.77□□□□□ -1.17
ATG4A-202ENST00000345734 PHLDA2Q53GA4 152 aa7.77□□□□□ -1.17
ATG4A-202ENST00000345734 WDR82Q6UXN9 313 aa7.77□□□□□ -1.17
ATG4A-202ENST00000345734 POC1AQ8NBT0 407 aa7.77□□□□□ -1.17
ATG4A-202ENST00000345734 OR2Z1Q8NG97 314 aa7.77□□□□□ -1.17
ATG4A-202ENST00000345734 PLPPR1Q8TBJ4 325 aa7.77□□□□□ -1.17
ATG4A-202ENST00000345734 MOB3AQ96BX8 217 aa7.77□□□□□ -1.17
ATG4A-202ENST00000345734 PFDN5Q99471 154 aa7.77□□□□□ -1.17
ATG4A-202ENST00000345734 HES4Q9HCC6 221 aa7.77□□□□□ -1.17
ATG4A-202ENST00000345734 MBNL3Q9NUK0 354 aaKnown RBP7.77□□□□□ -1.17
ATG4A-202ENST00000345734 COL6A6A6NMZ7 2263 aa7.77□□□□□ -1.17
ATG4A-202ENST00000345734 A0A1B0GV90 55 aa7.76□□□□□ -1.17
ATG4A-202ENST00000345734 CRYM-AS1A6NIL9 109 aa7.76□□□□□ -1.17
ATG4A-202ENST00000345734 TRDCB7Z8K6 153 aa7.76□□□□□ -1.17
ATG4A-202ENST00000345734 L7N2F9 121 aa7.76□□□□□ -1.17
ATG4A-202ENST00000345734 UBE2CO00762 179 aa7.76□□□□□ -1.17
ATG4A-202ENST00000345734 IFNA2P01563 188 aa7.76□□□□□ -1.17
ATG4A-202ENST00000345734 IFNA10P01566 189 aa7.76□□□□□ -1.17
ATG4A-202ENST00000345734 RNASE1P07998 156 aaKnown RBP7.76□□□□□ -1.17
ATG4A-202ENST00000345734 C1QTNF9P0C862 333 aa7.76□□□□□ -1.17
ATG4A-202ENST00000345734 GLRXP35754 106 aa7.76□□□□□ -1.17
ATG4A-202ENST00000345734 RBM39Q14498 530 aaKnown RBP7.76□□□□□ -1.17
ATG4A-202ENST00000345734 OPCMLQ14982 345 aa7.76□□□□□ -1.17
ATG4A-202ENST00000345734 SPRNQ5BIV9 151 aa7.76□□□□□ -1.17
ATG4A-202ENST00000345734 OR2B11Q5JQS5 317 aa7.76□□□□□ -1.17
ATG4A-202ENST00000345734 C1orf174Q8IYL3 243 aa7.76□□□□□ -1.17
ATG4A-202ENST00000345734 OR11L1Q8NGX0 322 aa7.76□□□□□ -1.17
ATG4A-202ENST00000345734 COQ8AQ8NI60 647 aa7.76□□□□□ -1.17
ATG4A-202ENST00000345734 GLYATL2Q8WU03 294 aa7.76□□□□□ -1.17
ATG4A-202ENST00000345734 TMEM171Q8WVE6 324 aa7.76□□□□□ -1.17
ATG4A-202ENST00000345734 PPP1R1CQ8WVI7 109 aa7.76□□□□□ -1.17
ATG4A-202ENST00000345734 NKX6-2Q9C056 277 aaPredicted RBP7.76□□□□□ -1.17
ATG4A-202ENST00000345734 MS4A7Q9GZW8 240 aaPredicted RBP7.76□□□□□ -1.17
ATG4A-202ENST00000345734 TLNRD1Q9H1K6 362 aa7.76□□□□□ -1.17
ATG4A-202ENST00000345734 TPRP12270 2363 aaKnown RBP7.76□□□□□ -1.17
ATG4A-202ENST00000345734 TRBV6-6A0A0A6YYG2 114 aa7.76□□□□□ -1.17
ATG4A-202ENST00000345734 A0A0B4J2A0 478 aa7.76□□□□□ -1.17
ATG4A-202ENST00000345734 TEX13DA0A0J9YY54 714 aaPredicted RBP7.76□□□□□ -1.17
ATG4A-202ENST00000345734 C16orf97H3BN30 126 aa7.76□□□□□ -1.17
ATG4A-202ENST00000345734 HAND1O96004 215 aa7.76□□□□□ -1.17
ATG4A-202ENST00000345734 CFDP00746 253 aaPredicted RBP7.76□□□□□ -1.17
ATG4A-202ENST00000345734 PPYP01298 95 aa7.76□□□□□ -1.17
ATG4A-202ENST00000345734 HOXB5P09067 269 aa7.76□□□□□ -1.17
ATG4A-202ENST00000345734 LGALS4P56470 323 aa7.76□□□□□ -1.17
ATG4A-202ENST00000345734 HERV-K104P61576 105 aa7.76□□□□□ -1.17
ATG4A-202ENST00000345734 ATXN7L3Q14CW9 347 aaPredicted RBP7.76□□□□□ -1.17
ATG4A-202ENST00000345734 ABCA11PQ4W5N1 156 aa7.76□□□□□ -1.17
ATG4A-202ENST00000345734 ZNF880Q6PDB4 577 aa7.76□□□□□ -1.17
ATG4A-202ENST00000345734 GSG1LQ6UXU4 331 aa7.76□□□□□ -1.17
ATG4A-202ENST00000345734 TMUB2Q71RG4 321 aa7.76□□□□□ -1.17
ATG4A-202ENST00000345734 FAM219AQ8IW50 185 aa7.76□□□□□ -1.17
ATG4A-202ENST00000345734 NARS2Q96I59 477 aaKnown RBP7.76□□□□□ -1.17
ATG4A-202ENST00000345734 C2orf88Q9BSF0 95 aa7.76□□□□□ -1.17
ATG4A-202ENST00000345734 RIMS4Q9H426 269 aaPredicted RBP7.76□□□□□ -1.17
ATG4A-202ENST00000345734 C1orf123Q9NWV4 160 aa7.76□□□□□ -1.17
ATG4A-202ENST00000345734 JKAMPQ9P055 326 aa7.76□□□□□ -1.17
ATG4A-202ENST00000345734 SHPKQ9UHJ6 478 aa7.76□□□□□ -1.17
ATG4A-202ENST00000345734 DIDO1Q9BTC0 2240 aaKnown RBP7.76□□□□□ -1.17
ATG4A-202ENST00000345734 KIR2DS1A0A191URI9 304 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 M0R233 179 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 SH2D1BO14796 132 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 PTBP3O95758 552 aaKnown RBP7.75□□□□□ -1.17
ATG4A-202ENST00000345734 IGHV3-13P01766 116 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 TK1P04183 234 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 KIR2DS4P43632 304 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 KLF3P57682 345 aaPredicted RBP7.75□□□□□ -1.17
ATG4A-202ENST00000345734 RBPJQ06330 500 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 KIR2DS1Q14954 304 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 SP6Q3SY56 376 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 C16orf54Q6UWD8 224 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 ACP7Q6ZNF0 438 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 SLC16A13Q7RTY0 426 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 SGPP2Q8IWX5 399 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 UBALD1Q8TB05 177 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 RTN4IP1Q8WWV3 396 aaPredicted RBP7.75□□□□□ -1.17
ATG4A-202ENST00000345734 OR10C1Q96KK4 312 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 MRPL37Q9BZE1 423 aaKnown RBP7.75□□□□□ -1.17
ATG4A-202ENST00000345734 NAA60Q9H7X0 242 aa7.75□□□□□ -1.17
ATG4A-202ENST00000345734 RAB18Q9NP72 206 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms