RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 Q6ZNB5 142 aa17.04■□□□□ 0.32
HDAC4-201ENST00000345617 LINC00518Q8N0U6 118 aa17.04■□□□□ 0.32
HDAC4-201ENST00000345617 TMEM190Q8WZ59 177 aa17.04■□□□□ 0.32
HDAC4-201ENST00000345617 MMP17Q9ULZ9 603 aa17.04■□□□□ 0.32
HDAC4-201ENST00000345617 SOCS7O14512 581 aa17.04■□□□□ 0.32
HDAC4-201ENST00000345617 ZNF502Q8TBZ5 544 aa17.04■□□□□ 0.32
HDAC4-201ENST00000345617 RAXQ9Y2V3 346 aa17.04■□□□□ 0.32
HDAC4-201ENST00000345617 NUDT3O95989 172 aa17.04■□□□□ 0.32
HDAC4-201ENST00000345617 SLC35B1P78383 322 aa17.04■□□□□ 0.32
HDAC4-201ENST00000345617 TRA2AQ13595 282 aaKnown RBP eCLIP17.04■□□□□ 0.32
HDAC4-201ENST00000345617 GAPTQ8N292 157 aa17.04■□□□□ 0.32
HDAC4-201ENST00000345617 OR8B12Q8NGG6 310 aa17.04■□□□□ 0.32
HDAC4-201ENST00000345617 WSB2Q9NYS7 404 aaPredicted RBP17.04■□□□□ 0.32
HDAC4-201ENST00000345617 PMELP40967 661 aa17.04■□□□□ 0.32
HDAC4-201ENST00000345617 LOC285556D6RIA3 1793 aa17.04■□□□□ 0.32
HDAC4-201ENST00000345617 HMGA1P17096 107 aaKnown RBP17.04■□□□□ 0.32
HDAC4-201ENST00000345617 GALNSP34059 522 aa17.04■□□□□ 0.32
HDAC4-201ENST00000345617 FHITP49789 147 aa17.04■□□□□ 0.32
HDAC4-201ENST00000345617 RAE1P78406 368 aaKnown RBP17.04■□□□□ 0.32
HDAC4-201ENST00000345617 PQLC2Q6ZP29 291 aa17.04■□□□□ 0.32
HDAC4-201ENST00000345617 TMEM140Q9NV12 185 aa17.04■□□□□ 0.32
HDAC4-201ENST00000345617 MRM2Q9UI43 246 aaKnown RBP17.04■□□□□ 0.32
HDAC4-201ENST00000345617 HIGD1AQ9Y241 93 aa17.04■□□□□ 0.32
HDAC4-201ENST00000345617 KCNK7Q9Y2U2 307 aa17.04■□□□□ 0.32
HDAC4-201ENST00000345617 CKS2P33552 79 aa17.04■□□□□ 0.32
HDAC4-201ENST00000345617 PTPMT1Q8WUK0 201 aaPredicted RBP17.04■□□□□ 0.32
HDAC4-201ENST00000345617 ORAI1Q96D31 301 aa17.04■□□□□ 0.32
HDAC4-201ENST00000345617 TMEM262E9PQX1 116 aa17.03■□□□□ 0.32
HDAC4-201ENST00000345617 PXNP49023 591 aaPredicted RBP17.03■□□□□ 0.32
HDAC4-201ENST00000345617 NUDT8Q8WV74 236 aa17.03■□□□□ 0.32
HDAC4-201ENST00000345617 CISD1Q9NZ45 108 aaKnown RBP17.03■□□□□ 0.32
HDAC4-201ENST00000345617 VSIG4Q9Y279 399 aa17.03■□□□□ 0.32
HDAC4-201ENST00000345617 SYNGR1O43759 233 aa17.03■□□□□ 0.32
HDAC4-201ENST00000345617 PAGE4O60829 102 aa17.03■□□□□ 0.32
HDAC4-201ENST00000345617 S1PR2O95136 353 aa17.03■□□□□ 0.32
HDAC4-201ENST00000345617 FMODQ06828 376 aa17.03■□□□□ 0.32
HDAC4-201ENST00000345617 SKP2Q13309 424 aa17.03■□□□□ 0.32
HDAC4-201ENST00000345617 PAXXQ9BUH6 204 aa17.03■□□□□ 0.32
HDAC4-201ENST00000345617 MAP1LC3AQ9H492 121 aa17.03■□□□□ 0.32
HDAC4-201ENST00000345617 MVDP53602 400 aa17.03■□□□□ 0.32
HDAC4-201ENST00000345617 PRICKLE4Q2TBC4 344 aa17.03■□□□□ 0.32
HDAC4-201ENST00000345617 ZNF519Q8TB69 540 aa17.03■□□□□ 0.32
HDAC4-201ENST00000345617 GALNT14Q96FL9 552 aa17.03■□□□□ 0.32
HDAC4-201ENST00000345617 SCN10AQ9Y5Y9 1956 aa17.03■□□□□ 0.32
HDAC4-201ENST00000345617 FAM90A26D6RGX4 464 aa17.03■□□□□ 0.32
HDAC4-201ENST00000345617 HOXC4P09017 264 aaPredicted RBP17.03■□□□□ 0.32
HDAC4-201ENST00000345617 SPNS2Q8IVW8 549 aa17.03■□□□□ 0.32
HDAC4-201ENST00000345617 FLYWCH2Q96CP2 140 aaKnown RBP17.03■□□□□ 0.32
HDAC4-201ENST00000345617 UBTD1Q9HAC8 227 aa17.03■□□□□ 0.32
HDAC4-201ENST00000345617 C19orf67A6NJJ6 358 aa17.03■□□□□ 0.32
HDAC4-201ENST00000345617 ZNF250P15622 560 aa17.03■□□□□ 0.32
HDAC4-201ENST00000345617 CD1BP29016 333 aa17.03■□□□□ 0.32
HDAC4-201ENST00000345617 SLC26A1Q9H2B4 701 aa17.03■□□□□ 0.32
HDAC4-201ENST00000345617 CREBBPQ92793 2442 aa17.03■□□□□ 0.32
HDAC4-201ENST00000345617 MKRN2OSH3BPM6 223 aa17.03■□□□□ 0.32
HDAC4-201ENST00000345617 MUC1P15941 1255 aaPredicted RBP17.03■□□□□ 0.32
HDAC4-201ENST00000345617 C19orf54Q5BKX5 351 aa17.03■□□□□ 0.32
HDAC4-201ENST00000345617 DEFB108AA8MXU0 73 aa17.03■□□□□ 0.32
HDAC4-201ENST00000345617 CTLA4P16410 223 aa17.03■□□□□ 0.32
HDAC4-201ENST00000345617 OR4X1Q8NH49 305 aa17.03■□□□□ 0.32
HDAC4-201ENST00000345617 SLC25A40Q8TBP6 338 aa17.03■□□□□ 0.32
HDAC4-201ENST00000345617 SSMEM1Q8WWF3 244 aa17.02■□□□□ 0.32
HDAC4-201ENST00000345617 MRAP2Q96G30 205 aa17.02■□□□□ 0.32
HDAC4-201ENST00000345617 DEFB127Q9H1M4 99 aa17.02■□□□□ 0.32
HDAC4-201ENST00000345617 EML6Q6ZMW3 1958 aa17.02■□□□□ 0.32
HDAC4-201ENST00000345617 JKAMPQ9P055 326 aa17.02■□□□□ 0.32
HDAC4-201ENST00000345617 ZNF735P0CB33 412 aa17.02■□□□□ 0.32
HDAC4-201ENST00000345617 SLC6A13Q9NSD5 602 aa17.02■□□□□ 0.32
HDAC4-201ENST00000345617 WFDC5Q8TCV5 224 aa17.02■□□□□ 0.32
HDAC4-201ENST00000345617 FRRS1LQ9P0K9 344 aa17.02■□□□□ 0.32
HDAC4-201ENST00000345617 RAB29O14966 203 aa17.02■□□□□ 0.32
HDAC4-201ENST00000345617 GGACTQ9BVM4 153 aa17.02■□□□□ 0.32
HDAC4-201ENST00000345617 KCNE5Q9UJ90 142 aa17.02■□□□□ 0.32
HDAC4-201ENST00000345617 TUBD1Q9UJT1 453 aa17.02■□□□□ 0.32
HDAC4-201ENST00000345617 CDX4O14627 284 aaPredicted RBP17.02■□□□□ 0.31
HDAC4-201ENST00000345617 SPRY3O43610 288 aa17.02■□□□□ 0.31
HDAC4-201ENST00000345617 RECKO95980 971 aa17.02■□□□□ 0.31
HDAC4-201ENST00000345617 TSPO2Q5TGU0 170 aa17.02■□□□□ 0.31
HDAC4-201ENST00000345617 GVQW1Q8N7I0 195 aa17.02■□□□□ 0.31
HDAC4-201ENST00000345617 ZNF665Q9H7R5 613 aa17.02■□□□□ 0.31
HDAC4-201ENST00000345617 COA4Q9NYJ1 87 aa17.02■□□□□ 0.31
HDAC4-201ENST00000345617 GNG10P50151 68 aa17.02■□□□□ 0.31
HDAC4-201ENST00000345617 TNFAIP6P98066 277 aaPredicted RBP17.02■□□□□ 0.31
HDAC4-201ENST00000345617 BRCA1P38398 1863 aaKnown RBP17.02■□□□□ 0.31
HDAC4-201ENST00000345617 OR4A8P0C604 315 aa17.01■□□□□ 0.31
HDAC4-201ENST00000345617 EIF3IQ13347 325 aaKnown RBP17.01■□□□□ 0.31
HDAC4-201ENST00000345617 INSL4Q14641 139 aa17.01■□□□□ 0.31
HDAC4-201ENST00000345617 GHITMQ9H3K2 345 aa17.01■□□□□ 0.31
HDAC4-201ENST00000345617 NYNRINQ9P2P1 1898 aaKnown RBP17.01■□□□□ 0.31
HDAC4-201ENST00000345617 ZXDAP98168 799 aa17.01■□□□□ 0.31
HDAC4-201ENST00000345617 ASCL3Q9NQ33 180 aa17.01■□□□□ 0.31
HDAC4-201ENST00000345617 GABRG2P18507 467 aa17.01■□□□□ 0.31
HDAC4-201ENST00000345617 IRF3Q14653 427 aa17.01■□□□□ 0.31
HDAC4-201ENST00000345617 MRGPRFQ96AM1 343 aa17.01■□□□□ 0.31
HDAC4-201ENST00000345617 LOXL2Q9Y4K0 774 aa17.01■□□□□ 0.31
HDAC4-201ENST00000345617 KBTBD11O94819 623 aa17.01■□□□□ 0.31
HDAC4-201ENST00000345617 MAS1LP35410 378 aa17.01■□□□□ 0.31
HDAC4-201ENST00000345617 AQP10Q96PS8 301 aa17.01■□□□□ 0.31
HDAC4-201ENST00000345617 TAF1LQ8IZX4 1826 aa17.01■□□□□ 0.31
HDAC4-201ENST00000345617 TRAV17A0A0B4J275 112 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms