RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 LOC389332A0A1B0GUA5 103 aa10.55□□□□□ -0.72
COL12A1-202ENST00000345356 CD27P26842 260 aa10.55□□□□□ -0.72
COL12A1-202ENST00000345356 LGALS4P56470 323 aa10.55□□□□□ -0.72
COL12A1-202ENST00000345356 JOSD1Q15040 202 aaPredicted RBP10.55□□□□□ -0.72
COL12A1-202ENST00000345356 HES3Q5TGS1 186 aa10.55□□□□□ -0.72
COL12A1-202ENST00000345356 ERASQ7Z444 233 aa10.55□□□□□ -0.72
COL12A1-202ENST00000345356 TXNDC17Q9BRA2 123 aa10.55□□□□□ -0.72
COL12A1-202ENST00000345356 AP5S1Q9NUS5 200 aa10.55□□□□□ -0.72
COL12A1-202ENST00000345356 USP54Q70EL1 1684 aa10.54□□□□□ -0.72
COL12A1-202ENST00000345356 LIPT2A6NK58 231 aa10.54□□□□□ -0.72
COL12A1-202ENST00000345356 NCBP2LA6PVI3 153 aaKnown RBP10.54□□□□□ -0.72
COL12A1-202ENST00000345356 CDC42EP3Q9UKI2 254 aa10.54□□□□□ -0.72
COL12A1-202ENST00000345356 IL2RAP01589 272 aa10.54□□□□□ -0.72
COL12A1-202ENST00000345356 SAMD13Q5VXD3 122 aa10.54□□□□□ -0.72
COL12A1-202ENST00000345356 LAMTOR2Q9Y2Q5 125 aa10.54□□□□□ -0.72
COL12A1-202ENST00000345356 MYO9BQ13459 2157 aa10.54□□□□□ -0.72
COL12A1-202ENST00000345356 PHLPP1O60346 1717 aa10.54□□□□□ -0.72
COL12A1-202ENST00000345356 OR2T8A6NH00 312 aa10.54□□□□□ -0.72
COL12A1-202ENST00000345356 FXYD3Q14802 87 aa10.54□□□□□ -0.72
COL12A1-202ENST00000345356 DNLZQ5SXM8 178 aa10.54□□□□□ -0.72
COL12A1-202ENST00000345356 OR4X1Q8NH49 305 aa10.54□□□□□ -0.72
COL12A1-202ENST00000345356 SFRP2Q96HF1 295 aa10.54□□□□□ -0.72
COL12A1-202ENST00000345356 COX14Q96I36 57 aa10.54□□□□□ -0.72
COL12A1-202ENST00000345356 GNRHR2Q96P88 292 aa10.54□□□□□ -0.72
COL12A1-202ENST00000345356 LOC107984156A0A0G2JMH3 177 aa10.54□□□□□ -0.72
COL12A1-202ENST00000345356 H0Y980 276 aa10.54□□□□□ -0.72
COL12A1-202ENST00000345356 BTF3P20290 206 aaKnown RBP10.54□□□□□ -0.72
COL12A1-202ENST00000345356 RTP5Q14D33 572 aa10.54□□□□□ -0.72
COL12A1-202ENST00000345356 ARL17AQ8IVW1 177 aa10.54□□□□□ -0.72
COL12A1-202ENST00000345356 OR4S2Q8NH73 311 aa10.54□□□□□ -0.72
COL12A1-202ENST00000345356 KISS1RQ969F8 398 aaPredicted RBP10.54□□□□□ -0.72
COL12A1-202ENST00000345356 PXMP4Q9Y6I8 212 aa10.54□□□□□ -0.72
COL12A1-202ENST00000345356 ZNF785A8K8V0 405 aa10.53□□□□□ -0.72
COL12A1-202ENST00000345356 HLA-DRB1P01911 266 aa10.53□□□□□ -0.72
COL12A1-202ENST00000345356 ADRA2AP08913 450 aa10.53□□□□□ -0.72
COL12A1-202ENST00000345356 CRYBA2P53672 197 aa10.53□□□□□ -0.72
COL12A1-202ENST00000345356 EGLN1Q9GZT9 426 aa10.53□□□□□ -0.72
COL12A1-202ENST00000345356 DEFB127Q9H1M4 99 aa10.53□□□□□ -0.72
COL12A1-202ENST00000345356 NRAPQ86VF7 1730 aa10.53□□□□□ -0.72
COL12A1-202ENST00000345356 FGF16O43320 207 aa10.53□□□□□ -0.72
COL12A1-202ENST00000345356 ALKBH6Q3KRA9 238 aa10.53□□□□□ -0.72
COL12A1-202ENST00000345356 IL36GQ9NZH8 169 aa10.53□□□□□ -0.72
COL12A1-202ENST00000345356 TRAV38-1A0A0B4J264 116 aa10.53□□□□□ -0.72
COL12A1-202ENST00000345356 ASAH2BP0C7U1 165 aa10.53□□□□□ -0.72
COL12A1-202ENST00000345356 LYZP61626 148 aa10.53□□□□□ -0.72
COL12A1-202ENST00000345356 ROM1Q03395 351 aa10.53□□□□□ -0.72
COL12A1-202ENST00000345356 P2RY6Q15077 328 aa10.53□□□□□ -0.72
COL12A1-202ENST00000345356 LPAL2Q16609 132 aa10.53□□□□□ -0.72
COL12A1-202ENST00000345356 HIST1H2BLQ99880 126 aa10.53□□□□□ -0.72
COL12A1-202ENST00000345356 IL36RNQ9UBH0 155 aa10.53□□□□□ -0.72
COL12A1-202ENST00000345356 SERGEFQ9UGK8 458 aa10.53□□□□□ -0.72
COL12A1-202ENST00000345356 TBL2Q9Y4P3 447 aaKnown RBP10.53□□□□□ -0.72
COL12A1-202ENST00000345356 WNT5AP41221 380 aa10.53□□□□□ -0.72
COL12A1-202ENST00000345356 UFC1Q9Y3C8 167 aa10.53□□□□□ -0.72
COL12A1-202ENST00000345356 SCN9AQ15858 1988 aa10.53□□□□□ -0.72
COL12A1-202ENST00000345356 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.53□□□□□ -0.72
COL12A1-202ENST00000345356 CYR61O00622 381 aa10.53□□□□□ -0.72
COL12A1-202ENST00000345356 LCN2P80188 198 aa10.53□□□□□ -0.72
COL12A1-202ENST00000345356 TTC32Q5I0X7 151 aa10.53□□□□□ -0.72
COL12A1-202ENST00000345356 GFI1BQ5VTD9 330 aa10.53□□□□□ -0.72
COL12A1-202ENST00000345356 SLC23A3Q6PIS1 610 aa10.53□□□□□ -0.72
COL12A1-202ENST00000345356 MMD2Q8IY49 270 aa10.53□□□□□ -0.72
COL12A1-202ENST00000345356 TMEM178AQ8NBL3 297 aa10.53□□□□□ -0.72
COL12A1-202ENST00000345356 WDYHV1Q96HA8 205 aa10.53□□□□□ -0.72
COL12A1-202ENST00000345356 BOD1Q96IK1 185 aa10.53□□□□□ -0.72
COL12A1-202ENST00000345356 DLEU1O43261 78 aa10.52□□□□□ -0.72
COL12A1-202ENST00000345356 TFPI2P48307 235 aa10.52□□□□□ -0.72
COL12A1-202ENST00000345356 KLF3P57682 345 aaPredicted RBP10.52□□□□□ -0.72
COL12A1-202ENST00000345356 HEPN1Q6WQI6 88 aa10.52□□□□□ -0.72
COL12A1-202ENST00000345356 PQLC2Q6ZP29 291 aa10.52□□□□□ -0.72
COL12A1-202ENST00000345356 SELENOHQ8IZQ5 122 aaKnown RBP10.52□□□□□ -0.72
COL12A1-202ENST00000345356 OR8G5Q8NG78 346 aa10.52□□□□□ -0.72
COL12A1-202ENST00000345356 MRGPRX1Q96LB2 322 aa10.52□□□□□ -0.72
COL12A1-202ENST00000345356 TRBV9A0A0B4J1U6 114 aa10.52□□□□□ -0.73
COL12A1-202ENST00000345356 NUDT3O95989 172 aa10.52□□□□□ -0.73
COL12A1-202ENST00000345356 EPHA8P29322 1005 aaPredicted RBP10.52□□□□□ -0.73
COL12A1-202ENST00000345356 TMEM187Q14656 261 aa10.52□□□□□ -0.73
COL12A1-202ENST00000345356 HIST3H2BBQ8N257 126 aa10.52□□□□□ -0.73
COL12A1-202ENST00000345356 GUCD1Q96NT3 240 aa10.52□□□□□ -0.73
COL12A1-202ENST00000345356 MRPL37Q9BZE1 423 aaKnown RBP10.52□□□□□ -0.73
COL12A1-202ENST00000345356 A0A1W2PQD3 144 aa10.52□□□□□ -0.73
COL12A1-202ENST00000345356 IGKV1D-16P01601 117 aa10.52□□□□□ -0.73
COL12A1-202ENST00000345356 RBM11P57052 281 aaKnown RBP10.52□□□□□ -0.73
COL12A1-202ENST00000345356 HERVK_113P61574 105 aa10.52□□□□□ -0.73
COL12A1-202ENST00000345356 LY6G6FQ5SQ64 297 aa10.52□□□□□ -0.73
COL12A1-202ENST00000345356 C10orf113Q5VZT2 155 aa10.52□□□□□ -0.73
COL12A1-202ENST00000345356 TMEM136Q6ZRR5 245 aa10.52□□□□□ -0.73
COL12A1-202ENST00000345356 F11RQ9Y624 299 aaKnown RBP10.52□□□□□ -0.73
COL12A1-202ENST00000345356 TNRC6CQ9HCJ0 1690 aaKnown RBP10.52□□□□□ -0.73
COL12A1-202ENST00000345356 LY75O60449 1722 aa10.52□□□□□ -0.73
COL12A1-202ENST00000345356 DICER1Q9UPY3 1922 aaKnown RBP10.52□□□□□ -0.73
COL12A1-202ENST00000345356 PMS2P1A4D2B8 440 aa10.52□□□□□ -0.73
COL12A1-202ENST00000345356 TMEM250H0YL14 139 aa10.52□□□□□ -0.73
COL12A1-202ENST00000345356 NPY1RP25929 384 aa10.52□□□□□ -0.73
COL12A1-202ENST00000345356 MAJINQ3KP22 176 aa10.52□□□□□ -0.73
COL12A1-202ENST00000345356 FBLN7Q53RD9 439 aa10.52□□□□□ -0.73
COL12A1-202ENST00000345356 TGIF2LYQ8IUE0 185 aa10.52□□□□□ -0.73
COL12A1-202ENST00000345356 GPHA2Q96T91 129 aa10.52□□□□□ -0.73
COL12A1-202ENST00000345356 TINAGQ9UJW2 476 aa10.52□□□□□ -0.73
COL12A1-202ENST00000345356 DTX4Q9Y2E6 619 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 181.3 ms