RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 RUSC1-AS1Q66K80 236 aa9.64□□□□□ -0.87
SNCA-202ENST00000345009 ZNF626Q68DY1 528 aa9.64□□□□□ -0.87
SNCA-202ENST00000345009 HCP5Q6MZN7 132 aa9.64□□□□□ -0.87
SNCA-202ENST00000345009 ZNF880Q6PDB4 577 aa9.64□□□□□ -0.87
SNCA-202ENST00000345009 BCL6BQ8N143 479 aaPredicted RBP9.64□□□□□ -0.87
SNCA-202ENST00000345009 BEND2Q8NDZ0 799 aa9.64□□□□□ -0.87
SNCA-202ENST00000345009 C15orf40Q8WUR7 153 aa9.64□□□□□ -0.87
SNCA-202ENST00000345009 DGCR14Q96DF8 476 aaKnown RBP9.64□□□□□ -0.87
SNCA-202ENST00000345009 SLC25A38Q96DW6 304 aa9.64□□□□□ -0.87
SNCA-202ENST00000345009 MDFIQ99750 246 aa9.64□□□□□ -0.87
SNCA-202ENST00000345009 DPAGT1Q9H3H5 408 aa9.64□□□□□ -0.87
SNCA-202ENST00000345009 Q9N2K0 584 aa9.64□□□□□ -0.87
SNCA-202ENST00000345009 KCNK7Q9Y2U2 307 aa9.64□□□□□ -0.87
SNCA-202ENST00000345009 A0A0U1RQK1 487 aa9.63□□□□□ -0.87
SNCA-202ENST00000345009 LEUTXA8MZ59 168 aa9.63□□□□□ -0.87
SNCA-202ENST00000345009 HSPA12AO43301 675 aa9.63□□□□□ -0.87
SNCA-202ENST00000345009 LPLP06858 475 aa9.63□□□□□ -0.87
SNCA-202ENST00000345009 ZBTB25P24278 435 aa9.63□□□□□ -0.87
SNCA-202ENST00000345009 IL3RAP26951 378 aa9.63□□□□□ -0.87
SNCA-202ENST00000345009 CBX5P45973 191 aa9.63□□□□□ -0.87
SNCA-202ENST00000345009 BAMBIQ13145 260 aa9.63□□□□□ -0.87
SNCA-202ENST00000345009 HMGN3Q15651 99 aa9.63□□□□□ -0.87
SNCA-202ENST00000345009 DEFB112Q30KQ8 113 aa9.63□□□□□ -0.87
SNCA-202ENST00000345009 ZNF260Q3ZCT1 412 aa9.63□□□□□ -0.87
SNCA-202ENST00000345009 CCDC144NLQ6NUI1 221 aa9.63□□□□□ -0.87
SNCA-202ENST00000345009 SIGLECL1Q8N7X8 197 aa9.63□□□□□ -0.87
SNCA-202ENST00000345009 C8orf31Q8N9H6 132 aa9.63□□□□□ -0.87
SNCA-202ENST00000345009 OR10X1Q8NGY0 326 aa9.63□□□□□ -0.87
SNCA-202ENST00000345009 OR1L1Q8NH94 360 aa9.63□□□□□ -0.87
SNCA-202ENST00000345009 DYNC2LI1Q8TCX1 351 aa9.63□□□□□ -0.87
SNCA-202ENST00000345009 SSMEM1Q8WWF3 244 aa9.63□□□□□ -0.87
SNCA-202ENST00000345009 IL1F10Q8WWZ1 152 aa9.63□□□□□ -0.87
SNCA-202ENST00000345009 ZNF286AQ9HBT8 521 aa9.63□□□□□ -0.87
SNCA-202ENST00000345009 GFOD1Q9NXC2 390 aa9.63□□□□□ -0.87
SNCA-202ENST00000345009 DPM3Q9P2X0 92 aa9.63□□□□□ -0.87
SNCA-202ENST00000345009 JPT1Q9UK76 154 aa9.63□□□□□ -0.87
SNCA-202ENST00000345009 TMEM235A6NFC5 223 aa9.62□□□□□ -0.87
SNCA-202ENST00000345009 ODF3BA8MYP8 253 aa9.62□□□□□ -0.87
SNCA-202ENST00000345009 TRIM77I1YAP6 450 aa9.62□□□□□ -0.87
SNCA-202ENST00000345009 J3QR06 171 aa9.62□□□□□ -0.87
SNCA-202ENST00000345009 YPEL1O60688 119 aa9.62□□□□□ -0.87
SNCA-202ENST00000345009 TPPPO94811 219 aa9.62□□□□□ -0.87
SNCA-202ENST00000345009 DIRAS3O95661 229 aa9.62□□□□□ -0.87
SNCA-202ENST00000345009 MELTFP08582 738 aa9.62□□□□□ -0.87
SNCA-202ENST00000345009 FCGR3AP08637 254 aa9.62□□□□□ -0.87
SNCA-202ENST00000345009 CTXN2P0C2S0 81 aa9.62□□□□□ -0.87
SNCA-202ENST00000345009 HILS1P60008 231 aa9.62□□□□□ -0.87
SNCA-202ENST00000345009 HLA-DRB3P79483 266 aa9.62□□□□□ -0.87
SNCA-202ENST00000345009 MADCAM1Q13477 382 aa9.62□□□□□ -0.87
SNCA-202ENST00000345009 AANATQ16613 207 aa9.62□□□□□ -0.87
SNCA-202ENST00000345009 OLFML2AQ68BL7 652 aa9.62□□□□□ -0.87
SNCA-202ENST00000345009 Q6YL49 198 aa9.62□□□□□ -0.87
SNCA-202ENST00000345009 TMEM86BQ8N661 226 aa9.62□□□□□ -0.87
SNCA-202ENST00000345009 OR4A4PQ8NGN8 299 aa9.62□□□□□ -0.87
SNCA-202ENST00000345009 OR5R1Q8NH85 324 aa9.62□□□□□ -0.87
SNCA-202ENST00000345009 YPEL2Q96QA6 119 aa9.62□□□□□ -0.87
SNCA-202ENST00000345009 HDHD3Q9BSH5 251 aaPredicted RBP9.62□□□□□ -0.87
SNCA-202ENST00000345009 ST6GALNAC5Q9BVH7 336 aa9.62□□□□□ -0.87
SNCA-202ENST00000345009 MMP28Q9H239 520 aa9.62□□□□□ -0.87
SNCA-202ENST00000345009 GHITMQ9H3K2 345 aa9.62□□□□□ -0.87
SNCA-202ENST00000345009 PRDM13Q9H4Q3 707 aa9.62□□□□□ -0.87
SNCA-202ENST00000345009 AUNIPQ9H7T9 357 aa9.62□□□□□ -0.87
SNCA-202ENST00000345009 ABCB10Q9NRK6 738 aa9.62□□□□□ -0.87
SNCA-202ENST00000345009 RABL2AQ9UBK7 228 aaPredicted RBP9.62□□□□□ -0.87
SNCA-202ENST00000345009 RABL2BQ9UNT1 228 aa9.62□□□□□ -0.87
SNCA-202ENST00000345009 PSG11Q9UQ72 335 aa9.62□□□□□ -0.87
SNCA-202ENST00000345009 MRPS7Q9Y2R9 242 aaKnown RBP9.62□□□□□ -0.87
SNCA-202ENST00000345009 POMT1Q9Y6A1 747 aa9.62□□□□□ -0.87
SNCA-202ENST00000345009 ANK3Q12955 4377 aaKnown RBP9.61□□□□□ -0.87
SNCA-202ENST00000345009 FAM172BPA6NC97 362 aa9.61□□□□□ -0.87
SNCA-202ENST00000345009 OOSP1A8MZH6 123 aa9.61□□□□□ -0.87
SNCA-202ENST00000345009 BUB1B-PAK6H3BSN5 160 aa9.61□□□□□ -0.87
SNCA-202ENST00000345009 FABP7O15540 132 aa9.61□□□□□ -0.87
SNCA-202ENST00000345009 HPGDSO60760 199 aa9.61□□□□□ -0.87
SNCA-202ENST00000345009 IGLV1-47P01700 117 aa9.61□□□□□ -0.87
SNCA-202ENST00000345009 BRS3P32247 399 aa9.61□□□□□ -0.87
SNCA-202ENST00000345009 PRSS3P35030 304 aa9.61□□□□□ -0.87
SNCA-202ENST00000345009 GDNFP39905 211 aa9.61□□□□□ -0.87
SNCA-202ENST00000345009 GNG10P50151 68 aa9.61□□□□□ -0.87
SNCA-202ENST00000345009 LOXL3P58215 753 aa9.61□□□□□ -0.87
SNCA-202ENST00000345009 SSX2Q16385 188 aa9.61□□□□□ -0.87
SNCA-202ENST00000345009 HLA-DRB5Q30154 266 aa9.61□□□□□ -0.87
SNCA-202ENST00000345009 LY6G6FQ5SQ64 297 aa9.61□□□□□ -0.87
SNCA-202ENST00000345009 Q6ZS49 121 aa9.61□□□□□ -0.87
SNCA-202ENST00000345009 LINC00311Q8N616 119 aa9.61□□□□□ -0.87
SNCA-202ENST00000345009 OR2AK2Q8NG84 335 aa9.61□□□□□ -0.87
SNCA-202ENST00000345009 OR10J5Q8NHC4 309 aa9.61□□□□□ -0.87
SNCA-202ENST00000345009 MCFD2Q8NI22 146 aa9.61□□□□□ -0.87
SNCA-202ENST00000345009 UBALD1Q8TB05 177 aa9.61□□□□□ -0.87
SNCA-202ENST00000345009 RPEQ96AT9 228 aa9.61□□□□□ -0.87
SNCA-202ENST00000345009 C6orf62Q9GZU0 229 aaPredicted RBP9.61□□□□□ -0.87
SNCA-202ENST00000345009 MEGF9Q9H1U4 602 aa9.61□□□□□ -0.87
SNCA-202ENST00000345009 IGHV3-43A0A0B4J1X8 118 aa9.6□□□□□ -0.87
SNCA-202ENST00000345009 CLDN34H7C241 214 aa9.6□□□□□ -0.87
SNCA-202ENST00000345009 IGHV3-7P01780 117 aa9.6□□□□□ -0.87
SNCA-202ENST00000345009 EIF4EP06730 217 aaKnown RBP9.6□□□□□ -0.87
SNCA-202ENST00000345009 IGHV3-43DP0DP04 118 aa9.6□□□□□ -0.87
SNCA-202ENST00000345009 ELK1P19419 428 aa9.6□□□□□ -0.87
SNCA-202ENST00000345009 S100A5P33763 92 aa9.6□□□□□ -0.87
SNCA-202ENST00000345009 CEACAM6P40199 344 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms