RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 RAB13P51153 203 aa18.07■□□□□ 0.48
CCDC38-201ENST00000344280 TMEM267Q0VDI3 215 aaPredicted RBP18.07■□□□□ 0.48
CCDC38-201ENST00000344280 ZNF146Q15072 292 aa18.07■□□□□ 0.48
CCDC38-201ENST00000344280 VWA1Q6PCB0 445 aa18.07■□□□□ 0.48
CCDC38-201ENST00000344280 KLF14Q8TD94 323 aaPredicted RBP18.07■□□□□ 0.48
CCDC38-201ENST00000344280 C14orf79Q96F83 325 aa18.07■□□□□ 0.48
CCDC38-201ENST00000344280 SMCO4Q9NRQ5 59 aa18.07■□□□□ 0.48
CCDC38-201ENST00000344280 CACNG5Q9UF02 275 aa18.07■□□□□ 0.48
CCDC38-201ENST00000344280 KCNS2Q9ULS6 477 aa18.07■□□□□ 0.48
CCDC38-201ENST00000344280 C7orf77A4D0Y5 90 aa18.07■□□□□ 0.48
CCDC38-201ENST00000344280 UMAD1C9J7I0 102 aa18.07■□□□□ 0.48
CCDC38-201ENST00000344280 J3QW42 95 aa18.07■□□□□ 0.48
CCDC38-201ENST00000344280 WDR1O75083 606 aa18.07■□□□□ 0.48
CCDC38-201ENST00000344280 IGKV1-5P01602 117 aa18.07■□□□□ 0.48
CCDC38-201ENST00000344280 RAC2P15153 192 aa18.07■□□□□ 0.48
CCDC38-201ENST00000344280 ZNF16P17020 682 aaPredicted RBP18.07■□□□□ 0.48
CCDC38-201ENST00000344280 ZNF585BQ52M93 769 aa18.07■□□□□ 0.48
CCDC38-201ENST00000344280 AVPI1Q5T686 147 aa18.07■□□□□ 0.48
CCDC38-201ENST00000344280 ISOC2Q96AB3 205 aa18.07■□□□□ 0.48
CCDC38-201ENST00000344280 RBM7Q9Y580 266 aaKnown RBP18.07■□□□□ 0.48
CCDC38-201ENST00000344280 A0A1B0GU03 582 aa18.06■□□□□ 0.48
CCDC38-201ENST00000344280 IQCF6A8MYZ5 107 aa18.06■□□□□ 0.48
CCDC38-201ENST00000344280 MMP9P14780 707 aa18.06■□□□□ 0.48
CCDC38-201ENST00000344280 CEACAM6P40199 344 aa18.06■□□□□ 0.48
CCDC38-201ENST00000344280 BAXQ07812 192 aa18.06■□□□□ 0.48
CCDC38-201ENST00000344280 HMGN3Q15651 99 aa18.06■□□□□ 0.48
CCDC38-201ENST00000344280 Q6ZT83 130 aa18.06■□□□□ 0.48
CCDC38-201ENST00000344280 Q8IYB0 196 aa18.06■□□□□ 0.48
CCDC38-201ENST00000344280 RNASE11Q8TAA1 199 aaKnown RBP18.06■□□□□ 0.48
CCDC38-201ENST00000344280 M0R036 132 aa18.06■□□□□ 0.48
CCDC38-201ENST00000344280 MLNRO43193 412 aa18.06■□□□□ 0.48
CCDC38-201ENST00000344280 IGHG3P01860 377 aa18.06■□□□□ 0.48
CCDC38-201ENST00000344280 GUSBP1Q15486 140 aa18.06■□□□□ 0.48
CCDC38-201ENST00000344280 OR8G1Q15617 311 aa18.06■□□□□ 0.48
CCDC38-201ENST00000344280 SLC35B3Q9H1N7 401 aa18.06■□□□□ 0.48
CCDC38-201ENST00000344280 MBNL3Q9NUK0 354 aaKnown RBP18.06■□□□□ 0.48
CCDC38-201ENST00000344280 SPAARA0A1B0GVQ0 90 aa18.05■□□□□ 0.48
CCDC38-201ENST00000344280 MOB1BQ7L9L4 216 aa18.05■□□□□ 0.48
CCDC38-201ENST00000344280 DEFB124Q8NES8 71 aa18.05■□□□□ 0.48
CCDC38-201ENST00000344280 CD300LFQ8TDQ1 290 aa18.05■□□□□ 0.48
CCDC38-201ENST00000344280 PBDC1Q9BVG4 233 aa18.05■□□□□ 0.48
CCDC38-201ENST00000344280 OBP2BQ9NPH6 170 aa18.05■□□□□ 0.48
CCDC38-201ENST00000344280 FZR1Q9UM11 496 aa18.05■□□□□ 0.48
CCDC38-201ENST00000344280 SH2D1BO14796 132 aa18.05■□□□□ 0.48
CCDC38-201ENST00000344280 TXNL1O43396 289 aa18.05■□□□□ 0.48
CCDC38-201ENST00000344280 IAPPP10997 89 aa18.05■□□□□ 0.48
CCDC38-201ENST00000344280 KIR2DL2P43627 348 aaPredicted RBP18.05■□□□□ 0.48
CCDC38-201ENST00000344280 C9orf106Q8NAJ2 232 aa18.05■□□□□ 0.48
CCDC38-201ENST00000344280 ATP5SQ99766 215 aa18.05■□□□□ 0.48
CCDC38-201ENST00000344280 CNOT4O95628 575 aaKnown RBP18.04■□□□□ 0.48
CCDC38-201ENST00000344280 HAND1O96004 215 aa18.04■□□□□ 0.48
CCDC38-201ENST00000344280 FOXF2Q12947 444 aa18.04■□□□□ 0.48
CCDC38-201ENST00000344280 SHEQ5VZ18 495 aa18.04■□□□□ 0.48
CCDC38-201ENST00000344280 C11orf53Q8IXP5 236 aa18.04■□□□□ 0.48
CCDC38-201ENST00000344280 LINC00518Q8N0U6 118 aa18.04■□□□□ 0.48
CCDC38-201ENST00000344280 DRAM1Q8N682 238 aa18.04■□□□□ 0.48
CCDC38-201ENST00000344280 KCNJ16Q9NPI9 418 aa18.04■□□□□ 0.48
CCDC38-201ENST00000344280 WIPI2Q9Y4P8 454 aa18.04■□□□□ 0.48
CCDC38-201ENST00000344280 KLF2Q9Y5W3 355 aaPredicted RBP18.04■□□□□ 0.48
CCDC38-201ENST00000344280 USF3Q68DE3 2245 aa18.04■□□□□ 0.48
CCDC38-201ENST00000344280 INO80CQ6PI98 192 aaPredicted RBP18.03■□□□□ 0.48
CCDC38-201ENST00000344280 WDR31Q8NA23 367 aa18.03■□□□□ 0.48
CCDC38-201ENST00000344280 LFNGQ8NES3 379 aa18.03■□□□□ 0.48
CCDC38-201ENST00000344280 OR1L1Q8NH94 360 aa18.03■□□□□ 0.48
CCDC38-201ENST00000344280 INTS1Q8N201 2190 aaKnown RBP18.03■□□□□ 0.48
CCDC38-201ENST00000344280 SP5Q6BEB4 398 aaPredicted RBP18.03■□□□□ 0.48
CCDC38-201ENST00000344280 PIP4P1Q86T03 277 aa18.03■□□□□ 0.48
CCDC38-201ENST00000344280 HIST1H2BAQ96A08 127 aa18.03■□□□□ 0.48
CCDC38-201ENST00000344280 RNF150Q9ULK6 438 aa18.03■□□□□ 0.48
CCDC38-201ENST00000344280 CACNA1GO43497 2377 aa18.03■□□□□ 0.48
CCDC38-201ENST00000344280 IGKV3-15P01624 115 aa18.02■□□□□ 0.48
CCDC38-201ENST00000344280 WNT2P09544 360 aa18.02■□□□□ 0.48
CCDC38-201ENST00000344280 SLC25A6P12236 298 aa18.02■□□□□ 0.48
CCDC38-201ENST00000344280 RPL35P42766 123 aaKnown RBP18.02■□□□□ 0.48
CCDC38-201ENST00000344280 SULT1A1P50225 295 aa18.02■□□□□ 0.48
CCDC38-201ENST00000344280 ARL16Q0P5N6 197 aa18.02■□□□□ 0.48
CCDC38-201ENST00000344280 HAGHQ16775 308 aa18.02■□□□□ 0.48
CCDC38-201ENST00000344280 Q6ZR03 302 aa18.02■□□□□ 0.48
CCDC38-201ENST00000344280 STX12Q86Y82 276 aa18.02■□□□□ 0.48
CCDC38-201ENST00000344280 HES4Q9HCC6 221 aa18.02■□□□□ 0.48
CCDC38-201ENST00000344280 RBFOX3A6NFN3 312 aa18.02■□□□□ 0.47
CCDC38-201ENST00000344280 FTH1P19P0C7X4 201 aa18.02■□□□□ 0.47
CCDC38-201ENST00000344280 HABP2Q14520 560 aaPredicted RBP18.02■□□□□ 0.47
CCDC38-201ENST00000344280 PRAMEF6Q5VXH4 476 aa18.02■□□□□ 0.47
CCDC38-201ENST00000344280 C15orf54Q8N8G6 183 aa18.02■□□□□ 0.47
CCDC38-201ENST00000344280 LSM10Q969L4 123 aaKnown RBP18.02■□□□□ 0.47
CCDC38-201ENST00000344280 GNPNAT1Q96EK6 184 aaPredicted RBP18.02■□□□□ 0.47
CCDC38-201ENST00000344280 BCL2L14Q9BZR8 327 aa18.02■□□□□ 0.47
CCDC38-201ENST00000344280 PARD6AQ9NPB6 346 aa18.02■□□□□ 0.47
CCDC38-201ENST00000344280 ASCL3Q9NQ33 180 aa18.02■□□□□ 0.47
CCDC38-201ENST00000344280 A0A1B0GW64 132 aa18.01■□□□□ 0.47
CCDC38-201ENST00000344280 OR3A1P47881 315 aa18.01■□□□□ 0.47
CCDC38-201ENST00000344280 AKR1D1P51857 326 aa18.01■□□□□ 0.47
CCDC38-201ENST00000344280 RPL23AP62750 156 aaKnown RBP18.01■□□□□ 0.47
CCDC38-201ENST00000344280 AESQ08117 197 aa18.01■□□□□ 0.47
CCDC38-201ENST00000344280 THNSL2Q86YJ6 484 aa18.01■□□□□ 0.47
CCDC38-201ENST00000344280 SFT2D1Q8WV19 159 aa18.01■□□□□ 0.47
CCDC38-201ENST00000344280 C5orf30Q96GV9 206 aa18.01■□□□□ 0.47
CCDC38-201ENST00000344280 EGLN1Q9GZT9 426 aa18.01■□□□□ 0.47
CCDC38-201ENST00000344280 SYNGR2O43760 224 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms