RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 MRPS11P82912 194 aaKnown RBP15.59■□□□□ 0.09
SMAD4-201ENST00000342988 MORN1Q5T089 497 aa15.59■□□□□ 0.09
SMAD4-201ENST00000342988 MRGPRDQ8TDS7 321 aa15.59■□□□□ 0.09
SMAD4-201ENST00000342988 MS4A6EQ96DS6 147 aa15.59■□□□□ 0.09
SMAD4-201ENST00000342988 MTCH2Q9Y6C9 303 aa15.59■□□□□ 0.09
SMAD4-201ENST00000342988 A1L4Q6 167 aa15.58■□□□□ 0.09
SMAD4-201ENST00000342988 FZR1Q9UM11 496 aa15.58■□□□□ 0.09
SMAD4-201ENST00000342988 MUC20Q8N307 709 aaPredicted RBP15.58■□□□□ 0.09
SMAD4-201ENST00000342988 TTC9BQ8N6N2 239 aa15.58■□□□□ 0.09
SMAD4-201ENST00000342988 ZNF296Q8WUU4 475 aaPredicted RBP15.58■□□□□ 0.08
SMAD4-201ENST00000342988 CDKN2AP42771 156 aaKnown RBP15.58■□□□□ 0.08
SMAD4-201ENST00000342988 SSBP4Q9BWG4 385 aaPredicted RBP15.58■□□□□ 0.08
SMAD4-201ENST00000342988 MED29Q9NX70 200 aa15.58■□□□□ 0.08
SMAD4-201ENST00000342988 TANC2Q9HCD6 1990 aa15.58■□□□□ 0.08
SMAD4-201ENST00000342988 SRD5A2P31213 254 aa15.58■□□□□ 0.08
SMAD4-201ENST00000342988 MVDP53602 400 aa15.58■□□□□ 0.08
SMAD4-201ENST00000342988 C16orf52Q8NHV5 167 aa15.58■□□□□ 0.08
SMAD4-201ENST00000342988 PARP14Q460N5 1801 aa15.58■□□□□ 0.08
SMAD4-201ENST00000342988 KDM3BQ7LBC6 1761 aa15.58■□□□□ 0.08
SMAD4-201ENST00000342988 NPPBP16860 134 aa15.58■□□□□ 0.08
SMAD4-201ENST00000342988 PRSS36Q5K4E3 855 aa15.58■□□□□ 0.08
SMAD4-201ENST00000342988 SSC4DQ8WTU2 575 aa15.58■□□□□ 0.08
SMAD4-201ENST00000342988 SPANXA1Q9NS26 97 aa15.58■□□□□ 0.08
SMAD4-201ENST00000342988 SCN10AQ9Y5Y9 1956 aa15.58■□□□□ 0.08
SMAD4-201ENST00000342988 TRPM7Q96QT4 1865 aa15.58■□□□□ 0.08
SMAD4-201ENST00000342988 DNAJC25-GNG10A0A024R161 153 aa15.58■□□□□ 0.08
SMAD4-201ENST00000342988 KLK10O43240 276 aa15.58■□□□□ 0.08
SMAD4-201ENST00000342988 OR11G2Q8NGC1 345 aa15.58■□□□□ 0.08
SMAD4-201ENST00000342988 LMO3Q8TAP4 145 aa15.58■□□□□ 0.08
SMAD4-201ENST00000342988 OR51B2Q9Y5P1 312 aa15.58■□□□□ 0.08
SMAD4-201ENST00000342988 MPC1Q9Y5U8 109 aa15.58■□□□□ 0.08
SMAD4-201ENST00000342988 IGKV3D-11A0A0A0MRZ8 115 aa15.57■□□□□ 0.08
SMAD4-201ENST00000342988 IGKV3-11P04433 115 aa15.57■□□□□ 0.08
SMAD4-201ENST00000342988 CKS1BP61024 79 aa15.57■□□□□ 0.08
SMAD4-201ENST00000342988 CLLU1OSQ5K130 101 aa15.57■□□□□ 0.08
SMAD4-201ENST00000342988 PARLQ9H300 379 aa15.57■□□□□ 0.08
SMAD4-201ENST00000342988 POLR2IP36954 125 aaKnown RBP15.57■□□□□ 0.08
SMAD4-201ENST00000342988 MUC4Q99102 2169 aa15.57■□□□□ 0.08
SMAD4-201ENST00000342988 TAPBPO15533 448 aa15.57■□□□□ 0.08
SMAD4-201ENST00000342988 CXCL13O43927 109 aa15.57■□□□□ 0.08
SMAD4-201ENST00000342988 EPPINO95925 133 aa15.57■□□□□ 0.08
SMAD4-201ENST00000342988 CFAP161Q6P656 301 aa15.57■□□□□ 0.08
SMAD4-201ENST00000342988 XIRP1Q702N8 1843 aaKnown RBP15.57■□□□□ 0.08
SMAD4-201ENST00000342988 TRAV8-2A0A0B4J237 113 aa15.57■□□□□ 0.08
SMAD4-201ENST00000342988 PF4V1P10720 104 aa15.57■□□□□ 0.08
SMAD4-201ENST00000342988 CDAP32320 146 aa15.57■□□□□ 0.08
SMAD4-201ENST00000342988 SELENOTP62341 195 aa15.57■□□□□ 0.08
SMAD4-201ENST00000342988 SRSF6Q13247 344 aaKnown RBP15.57■□□□□ 0.08
SMAD4-201ENST00000342988 GUCA2BQ16661 112 aa15.57■□□□□ 0.08
SMAD4-201ENST00000342988 OR1K1Q8NGR3 316 aa15.57■□□□□ 0.08
SMAD4-201ENST00000342988 PAAF1Q9BRP4 392 aa15.57■□□□□ 0.08
SMAD4-201ENST00000342988 TNCP24821 2201 aa15.57■□□□□ 0.08
SMAD4-201ENST00000342988 GREB1Q4ZG55 1949 aa15.57■□□□□ 0.08
SMAD4-201ENST00000342988 DHHO43323 396 aa15.57■□□□□ 0.08
SMAD4-201ENST00000342988 CTAG2O75638 210 aa15.57■□□□□ 0.08
SMAD4-201ENST00000342988 ZNF562Q6V9R5 426 aa15.57■□□□□ 0.08
SMAD4-201ENST00000342988 TMEM50AO95807 157 aa15.57■□□□□ 0.08
SMAD4-201ENST00000342988 GZMHP20718 246 aa15.57■□□□□ 0.08
SMAD4-201ENST00000342988 RPS4XP62701 263 aaKnown RBP15.57■□□□□ 0.08
SMAD4-201ENST00000342988 VKORC1L1Q8N0U8 176 aa15.57■□□□□ 0.08
SMAD4-201ENST00000342988 HDHD3Q9BSH5 251 aaPredicted RBP15.57■□□□□ 0.08
SMAD4-201ENST00000342988 COX11Q9Y6N1 276 aa15.57■□□□□ 0.08
SMAD4-201ENST00000342988 OR11H12B2RN74 326 aa15.57■□□□□ 0.08
SMAD4-201ENST00000342988 DEGS2Q6QHC5 323 aa15.57■□□□□ 0.08
SMAD4-201ENST00000342988 OR11H1Q8NG94 326 aa15.57■□□□□ 0.08
SMAD4-201ENST00000342988 OR11H2Q8NH07 326 aa15.57■□□□□ 0.08
SMAD4-201ENST00000342988 IGHV3-20A0A0C4DH32 117 aa15.56■□□□□ 0.08
SMAD4-201ENST00000342988 CRPP02741 224 aa15.56■□□□□ 0.08
SMAD4-201ENST00000342988 EPHA8P29322 1005 aaPredicted RBP15.56■□□□□ 0.08
SMAD4-201ENST00000342988 IL11RAQ14626 422 aa15.56■□□□□ 0.08
SMAD4-201ENST00000342988 ASB16Q96NS5 453 aa15.56■□□□□ 0.08
SMAD4-201ENST00000342988 RNF167Q9H6Y7 350 aa15.56■□□□□ 0.08
SMAD4-201ENST00000342988 TMSB15BA0A087X1C1 80 aa15.56■□□□□ 0.08
SMAD4-201ENST00000342988 DENND4AQ7Z401 1863 aa15.56■□□□□ 0.08
SMAD4-201ENST00000342988 A0A1B0GWB2 263 aa15.56■□□□□ 0.08
SMAD4-201ENST00000342988 SSC5DA1L4H1 1573 aa15.56■□□□□ 0.08
SMAD4-201ENST00000342988 FAM90A27PA6NNH2 459 aa15.56■□□□□ 0.08
SMAD4-201ENST00000342988 SKP2Q13309 424 aa15.56■□□□□ 0.08
SMAD4-201ENST00000342988 NIT1Q86X76 327 aa15.56■□□□□ 0.08
SMAD4-201ENST00000342988 PLPPR2Q96GM1 343 aa15.56■□□□□ 0.08
SMAD4-201ENST00000342988 GPR27Q9NS67 375 aa15.56■□□□□ 0.08
SMAD4-201ENST00000342988 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.56■□□□□ 0.08
SMAD4-201ENST00000342988 ST3GAL2Q16842 350 aa15.56■□□□□ 0.08
SMAD4-201ENST00000342988 SYNGR1O43759 233 aa15.56■□□□□ 0.08
SMAD4-201ENST00000342988 GABRG2P18507 467 aa15.56■□□□□ 0.08
SMAD4-201ENST00000342988 ANOS1P23352 680 aa15.56■□□□□ 0.08
SMAD4-201ENST00000342988 FHITP49789 147 aa15.56■□□□□ 0.08
SMAD4-201ENST00000342988 IGKV3D-15A0A087WSY6 115 aa15.56■□□□□ 0.08
SMAD4-201ENST00000342988 IGKV3-15P01624 115 aa15.56■□□□□ 0.08
SMAD4-201ENST00000342988 HSF4Q9ULV5 492 aa15.56■□□□□ 0.08
SMAD4-201ENST00000342988 WNK3Q9BYP7 1800 aa15.56■□□□□ 0.08
SMAD4-201ENST00000342988 PRKNO60260 465 aaPredicted RBP15.56■□□□□ 0.08
SMAD4-201ENST00000342988 ACVR1Q04771 509 aa15.56■□□□□ 0.08
SMAD4-201ENST00000342988 FSCN3Q9NQT6 498 aa15.56■□□□□ 0.08
SMAD4-201ENST00000342988 RREB1Q92766 1687 aa15.55■□□□□ 0.08
SMAD4-201ENST00000342988 STARD6P59095 220 aa15.55■□□□□ 0.08
SMAD4-201ENST00000342988 PARP11Q9NR21 331 aa15.55■□□□□ 0.08
SMAD4-201ENST00000342988 PLPP2O43688 288 aa15.55■□□□□ 0.08
SMAD4-201ENST00000342988 GLCCI1Q86VQ1 547 aa15.55■□□□□ 0.08
SMAD4-201ENST00000342988 ZNF414Q96IQ9 312 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 272.5 ms