RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 ENSAO43768 121 aaKnown RBP10.71□□□□□ -0.69
SNRNP48-201ENST00000342415 TRGC1P0CF51 173 aa10.71□□□□□ -0.69
SNRNP48-201ENST00000342415 AESQ08117 197 aa10.71□□□□□ -0.69
SNRNP48-201ENST00000342415 BTNL8Q6UX41 500 aa10.71□□□□□ -0.69
SNRNP48-201ENST00000342415 MRPL30Q8TCC3 161 aaKnown RBP10.71□□□□□ -0.69
SNRNP48-201ENST00000342415 OR1A1Q9P1Q5 309 aa10.71□□□□□ -0.69
SNRNP48-201ENST00000342415 TCFL5Q9UL49 500 aa10.71□□□□□ -0.69
SNRNP48-201ENST00000342415 COLCA2A8K830 154 aa10.71□□□□□ -0.7
SNRNP48-201ENST00000342415 NDUFB7P17568 137 aa10.71□□□□□ -0.7
SNRNP48-201ENST00000342415 PMELP40967 661 aa10.71□□□□□ -0.7
SNRNP48-201ENST00000342415 HIST1H3AP68431 136 aa10.71□□□□□ -0.7
SNRNP48-201ENST00000342415 WFDC1Q9HC57 220 aa10.71□□□□□ -0.7
SNRNP48-201ENST00000342415 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.71□□□□□ -0.7
SNRNP48-201ENST00000342415 TCL1AP56279 114 aa10.7□□□□□ -0.7
SNRNP48-201ENST00000342415 HES3Q5TGS1 186 aa10.7□□□□□ -0.7
SNRNP48-201ENST00000342415 OR2T10Q8NGZ9 312 aa10.7□□□□□ -0.7
SNRNP48-201ENST00000342415 BOD1Q96IK1 185 aa10.7□□□□□ -0.7
SNRNP48-201ENST00000342415 ZNF391Q9UJN7 358 aa10.7□□□□□ -0.7
SNRNP48-201ENST00000342415 ZIC3O60481 467 aa10.7□□□□□ -0.7
SNRNP48-201ENST00000342415 FAM157CP0CG43 387 aa10.7□□□□□ -0.7
SNRNP48-201ENST00000342415 ERVFC1-1P60608 527 aa10.7□□□□□ -0.7
SNRNP48-201ENST00000342415 PPP1CBP62140 327 aa10.7□□□□□ -0.7
SNRNP48-201ENST00000342415 RPS23P62266 143 aaKnown RBP10.7□□□□□ -0.7
SNRNP48-201ENST00000342415 GAMTQ14353 236 aa10.7□□□□□ -0.7
SNRNP48-201ENST00000342415 ACSM6Q6P461 480 aa10.7□□□□□ -0.7
SNRNP48-201ENST00000342415 CARFQ8N187 725 aa10.7□□□□□ -0.7
SNRNP48-201ENST00000342415 MS4A10Q96PG2 267 aa10.7□□□□□ -0.7
SNRNP48-201ENST00000342415 OR4C12Q96R67 309 aa10.7□□□□□ -0.7
SNRNP48-201ENST00000342415 PCGF1Q9BSM1 259 aa10.7□□□□□ -0.7
SNRNP48-201ENST00000342415 VAX2Q9UIW0 290 aa10.7□□□□□ -0.7
SNRNP48-201ENST00000342415 BCL2P10415 239 aa10.7□□□□□ -0.7
SNRNP48-201ENST00000342415 PMCHP20382 165 aa10.7□□□□□ -0.7
SNRNP48-201ENST00000342415 CDC34P49427 236 aaPredicted RBP10.7□□□□□ -0.7
SNRNP48-201ENST00000342415 SLC35B1P78383 322 aa10.7□□□□□ -0.7
SNRNP48-201ENST00000342415 ZNF826PQ6ZT77 177 aa10.7□□□□□ -0.7
SNRNP48-201ENST00000342415 TPPP3Q9BW30 176 aa10.7□□□□□ -0.7
SNRNP48-201ENST00000342415 OR2J1Q9GZK6 312 aa10.7□□□□□ -0.7
SNRNP48-201ENST00000342415 TMEM9BQ9NQ34 198 aa10.7□□□□□ -0.7
SNRNP48-201ENST00000342415 PQLC2LA1A4F0 135 aa10.69□□□□□ -0.7
SNRNP48-201ENST00000342415 C11orf94C9JXX5 98 aa10.69□□□□□ -0.7
SNRNP48-201ENST00000342415 E9PLN8 166 aa10.69□□□□□ -0.7
SNRNP48-201ENST00000342415 PGLYRP1O75594 196 aaPredicted RBP10.69□□□□□ -0.7
SNRNP48-201ENST00000342415 WDFY1Q8IWB7 410 aa10.69□□□□□ -0.7
SNRNP48-201ENST00000342415 SELENOHQ8IZQ5 122 aaKnown RBP10.69□□□□□ -0.7
SNRNP48-201ENST00000342415 H1FXQ92522 213 aaKnown RBP10.69□□□□□ -0.7
SNRNP48-201ENST00000342415 C10orf35Q96D05 121 aa10.69□□□□□ -0.7
SNRNP48-201ENST00000342415 A0A0G2JMM0 328 aa10.69□□□□□ -0.7
SNRNP48-201ENST00000342415 A0A1W2PPB8 328 aa10.69□□□□□ -0.7
SNRNP48-201ENST00000342415 A0A1W2PRS3 328 aa10.69□□□□□ -0.7
SNRNP48-201ENST00000342415 KIR3DP1A8MWS1 328 aa10.69□□□□□ -0.7
SNRNP48-201ENST00000342415 KIAA1324LA8MWY0 1029 aaPredicted RBP10.69□□□□□ -0.7
SNRNP48-201ENST00000342415 PITX3O75364 302 aa10.69□□□□□ -0.7
SNRNP48-201ENST00000342415 KHDC3LQ587J8 217 aa10.69□□□□□ -0.7
SNRNP48-201ENST00000342415 C16orf82Q7Z2V1 217 aa10.69□□□□□ -0.7
SNRNP48-201ENST00000342415 OR2Z1Q8NG97 314 aa10.69□□□□□ -0.7
SNRNP48-201ENST00000342415 ABHD14BQ96IU4 210 aa10.69□□□□□ -0.7
SNRNP48-201ENST00000342415 FAM173AQ9BQD7 235 aa10.69□□□□□ -0.7
SNRNP48-201ENST00000342415 WNT5BQ9H1J7 359 aa10.69□□□□□ -0.7
SNRNP48-201ENST00000342415 CHCHD2Q9Y6H1 151 aaPredicted RBP10.69□□□□□ -0.7
SNRNP48-201ENST00000342415 AGFG2O95081 481 aa10.69□□□□□ -0.7
SNRNP48-201ENST00000342415 ZNF385CQ66K41 422 aaPredicted RBP10.69□□□□□ -0.7
SNRNP48-201ENST00000342415 SF3B5Q9BWJ5 86 aaKnown RBP10.69□□□□□ -0.7
SNRNP48-201ENST00000342415 RBKSQ9H477 322 aa10.69□□□□□ -0.7
SNRNP48-201ENST00000342415 ZNF552Q9H707 407 aaPredicted RBP10.69□□□□□ -0.7
SNRNP48-201ENST00000342415 LRRK1Q38SD2 2015 aa10.69□□□□□ -0.7
SNRNP48-201ENST00000342415 GNG10P50151 68 aa10.69□□□□□ -0.7
SNRNP48-201ENST00000342415 NUFIP2Q7Z417 695 aaKnown RBP10.69□□□□□ -0.7
SNRNP48-201ENST00000342415 DTD1Q8TEA8 209 aa10.69□□□□□ -0.7
SNRNP48-201ENST00000342415 TECTBQ96PL2 329 aa10.69□□□□□ -0.7
SNRNP48-201ENST00000342415 LRFN3Q9BTN0 628 aa10.69□□□□□ -0.7
SNRNP48-201ENST00000342415 LYRM2Q9NU23 88 aaPredicted RBP10.69□□□□□ -0.7
SNRNP48-201ENST00000342415 TMEM30CPA0ZSE6 113 aa10.68□□□□□ -0.7
SNRNP48-201ENST00000342415 TOX4O94842 621 aa10.68□□□□□ -0.7
SNRNP48-201ENST00000342415 B2MP61769 119 aa10.68□□□□□ -0.7
SNRNP48-201ENST00000342415 PLGLAQ15195 96 aa10.68□□□□□ -0.7
SNRNP48-201ENST00000342415 GFI1BQ5VTD9 330 aa10.68□□□□□ -0.7
SNRNP48-201ENST00000342415 FER1L6-AS2Q96M78 137 aa10.68□□□□□ -0.7
SNRNP48-201ENST00000342415 S1PR3Q99500 378 aa10.68□□□□□ -0.7
SNRNP48-201ENST00000342415 PRDM6Q9NQX0 595 aa10.68□□□□□ -0.7
SNRNP48-201ENST00000342415 NAT8Q9UHE5 227 aa10.68□□□□□ -0.7
SNRNP48-201ENST00000342415 A0A1B0GV90 55 aa10.68□□□□□ -0.7
SNRNP48-201ENST00000342415 ST8SIA5O15466 376 aa10.68□□□□□ -0.7
SNRNP48-201ENST00000342415 SPRY3O43610 288 aa10.68□□□□□ -0.7
SNRNP48-201ENST00000342415 PTBP3O95758 552 aaKnown RBP10.68□□□□□ -0.7
SNRNP48-201ENST00000342415 MBP02144 154 aa10.68□□□□□ -0.7
SNRNP48-201ENST00000342415 THBS3P49746 956 aa10.68□□□□□ -0.7
SNRNP48-201ENST00000342415 RTP5Q14D33 572 aa10.68□□□□□ -0.7
SNRNP48-201ENST00000342415 MUCL1Q96DR8 90 aa10.68□□□□□ -0.7
SNRNP48-201ENST00000342415 IGKV1D-13A0A0B4J2D9 117 aa10.68□□□□□ -0.7
SNRNP48-201ENST00000342415 IGKV1-13P0DP09 117 aa10.68□□□□□ -0.7
SNRNP48-201ENST00000342415 MRGPRGQ86SM5 289 aa10.68□□□□□ -0.7
SNRNP48-201ENST00000342415 Q8WTZ3 238 aa10.68□□□□□ -0.7
SNRNP48-201ENST00000342415 CT55Q8WUE5 264 aa10.68□□□□□ -0.7
SNRNP48-201ENST00000342415 NEIL1Q96FI4 390 aaPredicted RBP10.68□□□□□ -0.7
SNRNP48-201ENST00000342415 ACY3Q96HD9 319 aa10.68□□□□□ -0.7
SNRNP48-201ENST00000342415 WIPF3A6NGB9 483 aa10.67□□□□□ -0.7
SNRNP48-201ENST00000342415 OR5G3P0C626 314 aa10.67□□□□□ -0.7
SNRNP48-201ENST00000342415 CDX1P47902 265 aaPredicted RBP10.67□□□□□ -0.7
SNRNP48-201ENST00000342415 PNRC1Q12796 327 aaPredicted RBP10.67□□□□□ -0.7
SNRNP48-201ENST00000342415 SCCPDHQ8NBX0 429 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms