RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 C19orf12Q9NSK7 152 aa12.68□□□□□ -0.38
TPM3-208ENST00000341485 LYRM2Q9NU23 88 aaPredicted RBP12.68□□□□□ -0.38
TPM3-208ENST00000341485 INTS1Q8N201 2190 aaKnown RBP12.67□□□□□ -0.38
TPM3-208ENST00000341485 A0A0G2JRQ6 117 aa12.67□□□□□ -0.38
TPM3-208ENST00000341485 OR5H1A6NKK0 313 aa12.67□□□□□ -0.38
TPM3-208ENST00000341485 SLC33A1O00400 549 aaPredicted RBP12.67□□□□□ -0.38
TPM3-208ENST00000341485 PITX3O75364 302 aa12.67□□□□□ -0.38
TPM3-208ENST00000341485 TMEM50AO95807 157 aa12.67□□□□□ -0.38
TPM3-208ENST00000341485 LMO1P25800 156 aa12.67□□□□□ -0.38
TPM3-208ENST00000341485 PLA2G5P39877 138 aa12.67□□□□□ -0.38
TPM3-208ENST00000341485 MDH2P40926 338 aaKnown RBP12.67□□□□□ -0.38
TPM3-208ENST00000341485 CLINT1Q14677 625 aa12.67□□□□□ -0.38
TPM3-208ENST00000341485 HFEQ30201 348 aa12.67□□□□□ -0.38
TPM3-208ENST00000341485 TMEM252Q8N6L7 170 aa12.67□□□□□ -0.38
TPM3-208ENST00000341485 IL1F10Q8WWZ1 152 aa12.67□□□□□ -0.38
TPM3-208ENST00000341485 NDRG3Q9UGV2 375 aa12.67□□□□□ -0.38
TPM3-208ENST00000341485 STRAPQ9Y3F4 350 aaKnown RBP12.67□□□□□ -0.38
TPM3-208ENST00000341485 ANKRD11Q6UB99 2663 aaPredicted RBP12.67□□□□□ -0.38
TPM3-208ENST00000341485 LAMA5O15230 3695 aa12.67□□□□□ -0.38
TPM3-208ENST00000341485 SPTBN4Q9H254 2564 aa12.67□□□□□ -0.38
TPM3-208ENST00000341485 IGHV3-64DA0A0J9YX35 117 aa12.66□□□□□ -0.38
TPM3-208ENST00000341485 NPIPB11E5RHQ5 1161 aa12.66□□□□□ -0.38
TPM3-208ENST00000341485 NXPH3O95157 252 aa12.66□□□□□ -0.38
TPM3-208ENST00000341485 IGKV3-15P01624 115 aa12.66□□□□□ -0.38
TPM3-208ENST00000341485 PGA5P0DJD9 388 aa12.66□□□□□ -0.38
TPM3-208ENST00000341485 OMGP23515 440 aa12.66□□□□□ -0.38
TPM3-208ENST00000341485 NFYBP25208 207 aa12.66□□□□□ -0.38
TPM3-208ENST00000341485 VAMP2P63027 116 aa12.66□□□□□ -0.38
TPM3-208ENST00000341485 ZNF154Q13106 437 aa12.66□□□□□ -0.38
TPM3-208ENST00000341485 ZNF497Q6ZNH5 498 aa12.66□□□□□ -0.38
TPM3-208ENST00000341485 TMEM182Q6ZP80 229 aaPredicted RBP12.66□□□□□ -0.38
TPM3-208ENST00000341485 Q8IYB0 196 aa12.66□□□□□ -0.38
TPM3-208ENST00000341485 COMMD1Q8N668 190 aa12.66□□□□□ -0.38
TPM3-208ENST00000341485 OR10V1Q8NGI7 309 aa12.66□□□□□ -0.38
TPM3-208ENST00000341485 OR51H1Q8NH63 302 aa12.66□□□□□ -0.38
TPM3-208ENST00000341485 TMEM171Q8WVE6 324 aa12.66□□□□□ -0.38
TPM3-208ENST00000341485 PRORYQ9H606 182 aa12.66□□□□□ -0.38
TPM3-208ENST00000341485 TREM2Q9NZC2 230 aa12.66□□□□□ -0.38
TPM3-208ENST00000341485 TAAR3PQ9P1P4 343 aa12.66□□□□□ -0.38
TPM3-208ENST00000341485 POLDIP2Q9Y2S7 368 aa12.66□□□□□ -0.38
TPM3-208ENST00000341485 RFNGQ9Y644 331 aa12.66□□□□□ -0.38
TPM3-208ENST00000341485 DMXL2Q8TDJ6 3036 aa12.66□□□□□ -0.38
TPM3-208ENST00000341485 A0A0G2JNJ9 132 aa12.66□□□□□ -0.38
TPM3-208ENST00000341485 MED19A0JLT2 244 aaPredicted RBP12.66□□□□□ -0.38
TPM3-208ENST00000341485 IQCF6A8MYZ5 107 aa12.66□□□□□ -0.38
TPM3-208ENST00000341485 H0YL77 283 aa12.66□□□□□ -0.38
TPM3-208ENST00000341485 K7N7A8 449 aa12.66□□□□□ -0.38
TPM3-208ENST00000341485 CDIPTO14735 213 aa12.66□□□□□ -0.38
TPM3-208ENST00000341485 RAC2P15153 192 aa12.66□□□□□ -0.38
TPM3-208ENST00000341485 RAB5CP51148 216 aa12.66□□□□□ -0.38
TPM3-208ENST00000341485 PSG7Q13046 419 aa12.66□□□□□ -0.38
TPM3-208ENST00000341485 MOB1BQ7L9L4 216 aa12.66□□□□□ -0.38
TPM3-208ENST00000341485 OR1J1Q8NGS3 322 aa12.66□□□□□ -0.38
TPM3-208ENST00000341485 AKR1E2Q96JD6 320 aa12.66□□□□□ -0.38
TPM3-208ENST00000341485 SLC25A31Q9H0C2 315 aa12.66□□□□□ -0.38
TPM3-208ENST00000341485 Q9UFV3 132 aa12.66□□□□□ -0.38
TPM3-208ENST00000341485 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.65□□□□□ -0.38
TPM3-208ENST00000341485 IGLV2-14P01704 120 aa12.65□□□□□ -0.38
TPM3-208ENST00000341485 PRH1P02810 166 aa12.65□□□□□ -0.38
TPM3-208ENST00000341485 PSG2P11465 335 aa12.65□□□□□ -0.38
TPM3-208ENST00000341485 MMP9P14780 707 aa12.65□□□□□ -0.38
TPM3-208ENST00000341485 S100GP29377 79 aa12.65□□□□□ -0.38
TPM3-208ENST00000341485 MPV17P39210 176 aa12.65□□□□□ -0.38
TPM3-208ENST00000341485 TESK1Q15569 626 aa12.65□□□□□ -0.38
TPM3-208ENST00000341485 ALKBH2Q6NS38 261 aa12.65□□□□□ -0.38
TPM3-208ENST00000341485 S100PBPQ96BU1 408 aa12.65□□□□□ -0.38
TPM3-208ENST00000341485 GPR146Q96CH1 333 aa12.65□□□□□ -0.38
TPM3-208ENST00000341485 TMEM8BA6NDV4 472 aa12.65□□□□□ -0.39
TPM3-208ENST00000341485 A8MXE2 369 aa12.65□□□□□ -0.39
TPM3-208ENST00000341485 CHST1O43916 411 aa12.65□□□□□ -0.39
TPM3-208ENST00000341485 NXPH2O95156 264 aa12.65□□□□□ -0.39
TPM3-208ENST00000341485 ATP6V0CP27449 155 aa12.65□□□□□ -0.39
TPM3-208ENST00000341485 PPT1P50897 306 aa12.65□□□□□ -0.39
TPM3-208ENST00000341485 CASP6P55212 293 aa12.65□□□□□ -0.39
TPM3-208ENST00000341485 PAX9P55771 341 aa12.65□□□□□ -0.39
TPM3-208ENST00000341485 ZNF266Q14584 549 aa12.65□□□□□ -0.39
TPM3-208ENST00000341485 GUK1Q16774 197 aa12.65□□□□□ -0.39
TPM3-208ENST00000341485 TIMM23BQ5SRD1 257 aa12.65□□□□□ -0.39
TPM3-208ENST00000341485 SHEQ5VZ18 495 aa12.65□□□□□ -0.39
TPM3-208ENST00000341485 PRR18Q8N4B5 295 aa12.65□□□□□ -0.39
TPM3-208ENST00000341485 UBALD1Q8TB05 177 aa12.65□□□□□ -0.39
TPM3-208ENST00000341485 RNF115Q9Y4L5 304 aa12.65□□□□□ -0.39
TPM3-208ENST00000341485 SLC25A15Q9Y619 301 aa12.65□□□□□ -0.39
TPM3-208ENST00000341485 GRPP07492 148 aa12.64□□□□□ -0.39
TPM3-208ENST00000341485 WNT2P09544 360 aa12.64□□□□□ -0.39
TPM3-208ENST00000341485 CECR9P0C854 216 aa12.64□□□□□ -0.39
TPM3-208ENST00000341485 SFTPCP11686 197 aa12.64□□□□□ -0.39
TPM3-208ENST00000341485 SELEP16581 610 aa12.64□□□□□ -0.39
TPM3-208ENST00000341485 EPHA1P21709 976 aa12.64□□□□□ -0.39
TPM3-208ENST00000341485 DYNLT3P51808 116 aa12.64□□□□□ -0.39
TPM3-208ENST00000341485 ZNF146Q15072 292 aa12.64□□□□□ -0.39
TPM3-208ENST00000341485 OR8G1Q15617 311 aa12.64□□□□□ -0.39
TPM3-208ENST00000341485 MRGPRGQ86SM5 289 aa12.64□□□□□ -0.39
TPM3-208ENST00000341485 OR5C1Q8NGR4 320 aa12.64□□□□□ -0.39
TPM3-208ENST00000341485 FAM213BQ8TBF2 198 aa12.64□□□□□ -0.39
TPM3-208ENST00000341485 MUCL1Q96DR8 90 aa12.64□□□□□ -0.39
TPM3-208ENST00000341485 AIFM2Q9BRQ8 373 aa12.64□□□□□ -0.39
TPM3-208ENST00000341485 TRAPPC2LQ9UL33 140 aa12.64□□□□□ -0.39
TPM3-208ENST00000341485 TRGV8A0A0C4DH27 118 aa12.63□□□□□ -0.39
TPM3-208ENST00000341485 CST7O76096 145 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms