RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 EXOSC4Q9NPD3 245 aaKnown RBP8.39□□□□□ -1.07
TPM3-207ENST00000341372 SSR3Q9UNL2 185 aa8.39□□□□□ -1.07
TPM3-207ENST00000341372 FOXJ3Q9UPW0 622 aa8.39□□□□□ -1.07
TPM3-207ENST00000341372 TRAV8-7A0A075B6U6 113 aa8.39□□□□□ -1.07
TPM3-207ENST00000341372 HAND1O96004 215 aa8.39□□□□□ -1.07
TPM3-207ENST00000341372 LMO1P25800 156 aa8.39□□□□□ -1.07
TPM3-207ENST00000341372 BDKRB2P30411 391 aa8.39□□□□□ -1.07
TPM3-207ENST00000341372 ARF6P62330 175 aa8.39□□□□□ -1.07
TPM3-207ENST00000341372 DDI2Q5TDH0 399 aa8.39□□□□□ -1.07
TPM3-207ENST00000341372 TMEM268Q5VZI3 342 aa8.39□□□□□ -1.07
TPM3-207ENST00000341372 LINC00299Q6ZSB3 139 aa8.39□□□□□ -1.07
TPM3-207ENST00000341372 BPIFB2Q8N4F0 458 aa8.39□□□□□ -1.07
TPM3-207ENST00000341372 PCGF1Q9BSM1 259 aa8.39□□□□□ -1.07
TPM3-207ENST00000341372 TMED9Q9BVK6 235 aa8.39□□□□□ -1.07
TPM3-207ENST00000341372 RAB9BQ9NP90 201 aa8.39□□□□□ -1.07
TPM3-207ENST00000341372 TPSG1Q9NRR2 321 aa8.39□□□□□ -1.07
TPM3-207ENST00000341372 C19orf12Q9NSK7 152 aa8.39□□□□□ -1.07
TPM3-207ENST00000341372 IL36GQ9NZH8 169 aa8.39□□□□□ -1.07
TPM3-207ENST00000341372 CCDC59Q9P031 241 aaKnown RBP8.39□□□□□ -1.07
TPM3-207ENST00000341372 CENPVL3A0A0U1RRI6 287 aa8.38□□□□□ -1.07
TPM3-207ENST00000341372 A0A1B0GVG6 124 aa8.38□□□□□ -1.07
TPM3-207ENST00000341372 J3QRK9 145 aa8.38□□□□□ -1.07
TPM3-207ENST00000341372 VCYO14598 125 aa8.38□□□□□ -1.07
TPM3-207ENST00000341372 PIN1P1O15428 100 aa8.38□□□□□ -1.07
TPM3-207ENST00000341372 VENTXO95231 258 aa8.38□□□□□ -1.07
TPM3-207ENST00000341372 PRKACAP17612 351 aa8.38□□□□□ -1.07
TPM3-207ENST00000341372 SDC2P34741 201 aa8.38□□□□□ -1.07
TPM3-207ENST00000341372 KRTAP24-1Q3LI83 254 aa8.38□□□□□ -1.07
TPM3-207ENST00000341372 FAM27D1Q5T7N8 215 aa8.38□□□□□ -1.07
TPM3-207ENST00000341372 GPR157Q5UAW9 335 aa8.38□□□□□ -1.07
TPM3-207ENST00000341372 UNQ9370/PRO34162Q6UXP9 181 aa8.38□□□□□ -1.07
TPM3-207ENST00000341372 C17orf107Q6ZR85 190 aa8.38□□□□□ -1.07
TPM3-207ENST00000341372 VMO1Q7Z5L0 202 aa8.38□□□□□ -1.07
TPM3-207ENST00000341372 NR2C2APQ86WQ0 139 aa8.38□□□□□ -1.07
TPM3-207ENST00000341372 LYPD6Q86Y78 171 aa8.38□□□□□ -1.07
TPM3-207ENST00000341372 MS4A15Q8N5U1 240 aa8.38□□□□□ -1.07
TPM3-207ENST00000341372 OR56B1Q8NGI3 324 aa8.38□□□□□ -1.07
TPM3-207ENST00000341372 MCFD2Q8NI22 146 aa8.38□□□□□ -1.07
TPM3-207ENST00000341372 TNFRSF14Q92956 283 aa8.38□□□□□ -1.07
TPM3-207ENST00000341372 ORAI1Q96D31 301 aa8.38□□□□□ -1.07
TPM3-207ENST00000341372 ZNF48Q96MX3 618 aaPredicted RBP8.38□□□□□ -1.07
TPM3-207ENST00000341372 ONECUT1Q9UBC0 465 aa8.38□□□□□ -1.07
TPM3-207ENST00000341372 CKLFQ9UBR5 152 aa8.38□□□□□ -1.07
TPM3-207ENST00000341372 A3GALT2U3KPV4 340 aa8.38□□□□□ -1.07
TPM3-207ENST00000341372 STAB1Q9NY15 2570 aa8.38□□□□□ -1.07
TPM3-207ENST00000341372 CDRT1O95170 752 aa8.37□□□□□ -1.07
TPM3-207ENST00000341372 ZNF93P35789 620 aaPredicted RBP8.37□□□□□ -1.07
TPM3-207ENST00000341372 RPL31P62899 125 aaKnown RBP8.37□□□□□ -1.07
TPM3-207ENST00000341372 IFITM3Q01628 133 aa8.37□□□□□ -1.07
TPM3-207ENST00000341372 NHLRC3Q5JS37 347 aa8.37□□□□□ -1.07
TPM3-207ENST00000341372 Q6P435 159 aa8.37□□□□□ -1.07
TPM3-207ENST00000341372 RTN4RL2Q86UN3 420 aa8.37□□□□□ -1.07
TPM3-207ENST00000341372 ASCC1Q8N9N2 400 aaKnown RBP8.37□□□□□ -1.07
TPM3-207ENST00000341372 OR51T1Q8NGJ9 327 aa8.37□□□□□ -1.07
TPM3-207ENST00000341372 TNFAIP8L1Q8WVP5 186 aa8.37□□□□□ -1.07
TPM3-207ENST00000341372 TMEM158Q8WZ71 300 aa8.37□□□□□ -1.07
TPM3-207ENST00000341372 DNHD1Q96M86 4753 aa8.37□□□□□ -1.07
TPM3-207ENST00000341372 IGHV3OR16-10A0A075B7F0 116 aa8.37□□□□□ -1.07
TPM3-207ENST00000341372 IGHV1-69DA0A0B4J2H0 117 aa8.37□□□□□ -1.07
TPM3-207ENST00000341372 MFSD2BA6NFX1 497 aa8.37□□□□□ -1.07
TPM3-207ENST00000341372 OR2H2O95918 312 aa8.37□□□□□ -1.07
TPM3-207ENST00000341372 IGHV1-69P01742 117 aa8.37□□□□□ -1.07
TPM3-207ENST00000341372 PRTN3P24158 256 aa8.37□□□□□ -1.07
TPM3-207ENST00000341372 PTGFRP43088 359 aa8.37□□□□□ -1.07
TPM3-207ENST00000341372 OR3A1P47881 315 aa8.37□□□□□ -1.07
TPM3-207ENST00000341372 OR3A4PP47883 348 aa8.37□□□□□ -1.07
TPM3-207ENST00000341372 CNN1P51911 297 aaKnown RBP8.37□□□□□ -1.07
TPM3-207ENST00000341372 DLX6P56179 175 aa8.37□□□□□ -1.07
TPM3-207ENST00000341372 MXD1Q05195 221 aa8.37□□□□□ -1.07
TPM3-207ENST00000341372 DYNC1I2Q13409 638 aaKnown RBP8.37□□□□□ -1.07
TPM3-207ENST00000341372 C11orf42Q8N5U0 333 aa8.37□□□□□ -1.07
TPM3-207ENST00000341372 SIGLECL1Q8N7X8 197 aa8.37□□□□□ -1.07
TPM3-207ENST00000341372 ZDHHC22Q8N966 263 aa8.37□□□□□ -1.07
TPM3-207ENST00000341372 CHST4Q8NCG5 386 aa8.37□□□□□ -1.07
TPM3-207ENST00000341372 OR5D13Q8NGL4 314 aa8.37□□□□□ -1.07
TPM3-207ENST00000341372 C22orf15Q8WYQ4 148 aa8.37□□□□□ -1.07
TPM3-207ENST00000341372 SLC25A46Q96AG3 418 aa8.37□□□□□ -1.07
TPM3-207ENST00000341372 GON7Q9BXV9 100 aa8.37□□□□□ -1.07
TPM3-207ENST00000341372 GPR61Q9BZJ8 451 aa8.37□□□□□ -1.07
TPM3-207ENST00000341372 METTL8Q9H825 291 aaKnown RBP8.37□□□□□ -1.07
TPM3-207ENST00000341372 PLGRKTQ9HBL7 147 aa8.37□□□□□ -1.07
TPM3-207ENST00000341372 NOX4Q9NPH5 578 aa8.37□□□□□ -1.07
TPM3-207ENST00000341372 ESM1Q9NQ30 184 aa8.37□□□□□ -1.07
TPM3-207ENST00000341372 GLS2Q9UI32 602 aa8.37□□□□□ -1.07
TPM3-207ENST00000341372 GSTK1Q9Y2Q3 226 aa8.37□□□□□ -1.07
TPM3-207ENST00000341372 A0A075B6Q4 140 aa8.36□□□□□ -1.07
TPM3-207ENST00000341372 SH2D1BO14796 132 aa8.36□□□□□ -1.07
TPM3-207ENST00000341372 RBP4P02753 201 aa8.36□□□□□ -1.07
TPM3-207ENST00000341372 CSN2P05814 226 aa8.36□□□□□ -1.07
TPM3-207ENST00000341372 ERP29P30040 261 aaKnown RBP8.36□□□□□ -1.07
TPM3-207ENST00000341372 NCR3LG1Q68D85 454 aa8.36□□□□□ -1.07
TPM3-207ENST00000341372 BRD3OSQ6XYD6 125 aa8.36□□□□□ -1.07
TPM3-207ENST00000341372 TCF23Q7RTU1 214 aa8.36□□□□□ -1.07
TPM3-207ENST00000341372 OR4S1Q8NGB4 309 aa8.36□□□□□ -1.07
TPM3-207ENST00000341372 OR52B4Q8NGK2 314 aa8.36□□□□□ -1.07
TPM3-207ENST00000341372 LHX4Q969G2 390 aa8.36□□□□□ -1.07
TPM3-207ENST00000341372 C1orf147Q96MC9 270 aaPredicted RBP8.36□□□□□ -1.07
TPM3-207ENST00000341372 KCTD7Q96MP8 289 aa8.36□□□□□ -1.07
TPM3-207ENST00000341372 GPER1Q99527 375 aa8.36□□□□□ -1.07
TPM3-207ENST00000341372 RNF212BA8MTL3 300 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms